Linepithema humile (Argentine ant): 105669947
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Entry
105669947 CDS
T04898
Symbol
Crag
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105669947 (Crag)
Membrane trafficking [BR:
lhu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105669947 (Crag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
105669947
NCBI-ProteinID:
XP_012218593
LinkDB
All DBs
Position
3:9410555..9421828
Genome browser
AA seq
1603 aa
AA seq
DB search
MDERRVADYFVIAGLPGQDDDHSQDSETNDKLEDWCQEGTHLKDMHMPPPITDLAVIFPA
LGEHCPEGYTLLDQTVMGFPADLNHGSLRTNECYLCYRRGRDKPPLVDIGVIYDGKERIM
QDAEIVLETPKGHVANVNNSTSKIFVTYRRASRKMPCNSLVVTDICVILTNKGESPPHAF
CVINKNLNKGMLGSDVFLCYKKSMNRANLISFKPAILYKYPMADYSSFVFPNSVAMFCLP
MGATIECWPKVACKPKPVFSTFVLTVADAAQKIYGSAITFYEELQLELETPNCINNQEIM
DTVDENNKNSDTEITKDKPQVKMKIFKGSGILKKLNILQLEKLQYTDPANQSLNISKSIC
ILSHWPFFDTFEKFLVFLHGMVNGKPQSVPIEKYISYFLCDIPFPSPQRPRILVQLSSQD
RLILTQPEDLALPRSGASFRQLLINLGPDNCLLILLLILTEQKILVHSLRPDVLTSVSEA
IAMILFPFKWQCPYIPLCPLGLAEVLHAPLPFLIGVDSRFFDLYDPPSDVNCVNLDTNNI
AICDDKKYLSVKLLPKKAARQLRNWLELLSSKIISWGKTNCSQKDRGDEDFSVDREFQQK
RREQALELEIQDAFLRFMATILKGYRSYLLPITKAPTVGTTDPTSLFNIQAFLRSRDKAH
AKFYTMLVRTQMFIRFIEERSFVSDMDMAGLAFFDECTERVEEENVTLLELDESQHSERT
VFIPPPEAGTNQTPIIYKSFKLNPDLMRPQKNFCLKNPSLSAFGMVPGSPMARRTKHEIK
VAQKMARKQAAMPDRWGRCLLGTCYSLWFLHLPAMLQVSSQPAAILHQAYELLVKMQKLR
LDPMEEVCYRAMMQLCGVYGQPVLAVKLLFHMKRSGVQPNALTYGFYNKAVLEATWPSDM
TNSSQLMWNKLRNVIVGAALFKKAGKKSARRRLSSNVDFLTTDKTEGMEHALSRSSLDSS
HSQDTEAAHSDSTKGSSVSDLPGFGSFELKAKLLRQNSIVKDQATLSMLQSDELDQAPSN
PRLTRSVESPLKSPIRTPVTENDPLGALINDETPIVSPSEENDSNCSTSTLTVLNNTTEE
RPGGPLLFRSNILPRSATFHQAVDESGVTVGGHLQRSETMPHSVAQQGEQEREKERLEIS
SLWSQNKDSVTSSLSSLGSSLKISFGRYSTGGLAFAKNKDLISSTQLIESLSLSSYISPS
SLTGKKSNEIILGGLNSLKSAATTVVKKFDEIKEAISATSTPVKIKEREQKLAYGVSHES
LDSLTDGSLQDRNETSTRASGDGNLDLCSLYELAECLYPKGTRELEERLAIELVLSSASR
CHHCAAILYDEEIMAGWQPEDSNLNTVCQYCDKATVPLLTVTILDYRCEASEKNNDPLMG
ALVELLDRPKESLEPITVPYLNPLVLRKELESVLSQEGDACLTKHRFIQEHPIVYWNLIW
YFERINLTSHLPDLWLNSDKNLEVQRAVGSVGVRTMWDNECLHMDRLPMYLQWKLNSTED
RTLMQTVITYVRCNDLAEPIIRVALERSKHQTGDHPFSIYRDVLFLAFTVLGRTNIDQGV
FDREYSLSLEKFSENEEKLLHKIDAPPTMMSVYCRYYFKQLNV
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagaagggtagcggattattttgttatcgccggtttacccgggcaagatgac
gatcacagtcaagacagcgagactaatgacaaactggaggactggtgccaggaaggcact
catctgaaggacatgcatatgccacctccgatcacggatcttgctgtaatattccctgca
ttgggagaacactgtccggagggatacacactgttggatcaaaccgtaatgggtttcccc
gcggacttgaatcatgggagcttacgaacaaacgagtgttacttatgttatagaagagga
cgagataagcctcctttagtcgatatcggtgtaatatatgacgggaaagaacgtataatg
caggatgctgaaatagtattagaaacccctaaaggccatgtggcgaatgtaaataattct
acttcaaaaatttttgtaacatatagacgagcaagtcggaagatgccttgcaattctctt
gtcgttaccgacatatgtgttatcttaacgaataaaggggagagcccgccccacgcattc
tgcgttatcaataagaatttaaacaaaggaatgctaggcagcgatgtatttttgtgctac
aagaagtctatgaatcgcgcgaatctgatatcattcaaaccggcaatactctacaaatat
cccatggctgattacagcagttttgtctttccaaactccgtcgccatgttttgtttaccg
atgggcgcaactatagaatgctggcctaaagtagcgtgtaaacctaaaccagtattctcg
acattcgtcttaacggttgccgatgctgctcaaaagatatacggctcagcaataacattt
tacgaggagcttcaactggaattggaaactccaaattgcataaacaatcaggagatcatg
gacaccgttgacgagaataacaaaaatagcgatactgaaatcactaaagacaagccgcag
gtgaaaatgaagatattcaagggatccggcatacttaagaagcttaatatattgcaattg
gaaaagttgcagtacacagaccccgcgaaccagtcgctgaacatcagcaaatccatatgc
atactgtctcactggccgttcttcgacacgttcgagaagttcttggttttcctgcacggc
atggtgaacggcaagccgcagagtgtgccgatcgaaaagtacatatcgtatttcttgtgc
gatataccgtttccgagcccgcaacgtccgaggatcttggtgcagctcagcagtcaggac
agactgatcttgacgcagccggaggatctggctctacccagatcgggcgcaagttttcgg
cagttgctgataaatctgggacctgacaactgtctgctgatactgttgttaatattaacc
gagcagaaaatactggttcactctttacgcccggacgtacttacttcagtgagcgaagcc
atcgctatgattctatttcctttcaaatggcagtgtccttatatacctttgtgtccgctg
ggattagcagaggtattgcatgcaccgttgccgttcttaattggtgtggattcaagattc
ttcgacttatacgatcctccttctgacgttaattgcgtcaatttggatacaaataatatt
gcaatttgcgacgataagaaatatttaagtgtgaagttgcttcctaaaaaggcagctcgg
cagctcagaaattggttggagcttttatcgtcgaaaattatttcgtggggaaagacaaac
tgttcccagaaagatcgcggagacgaagatttcagcgtggacagagaatttcaacaaaaa
cgaagggagcaagctttggaactcgaaattcaggatgccttcttgagatttatggcgacg
attctcaaaggatatcgaagttatttgttgccgatcacaaaagcacctaccgttggaaca
acggatcccacgagtttgtttaatatccaagcgtttttgaggagtcgcgataaagctcac
gctaaattttacaccatgcttgtcaggacacagatgtttattaggttcatagaagaaaga
agttttgtgtccgatatggatatggcaggattagcgttttttgacgagtgtacagaacga
gttgaggaagaaaatgtaactctcttggaactggatgaatctcagcacagtgaacgcaca
gtatttatacctccgcctgaagcagggacaaatcaaacaccaataatatacaaatcattc
aaattgaatccagatctgatgaggcctcagaagaacttctgcttgaagaatccatcttta
agtgccttcggtatggtacctgggagtcctatggctcgtagaacaaagcacgaaatcaaa
gttgctcaaaaaatggctcgaaaacaagctgcgatgcctgacagatggggcaggtgtctg
cttggcacatgctacagcctttggtttctgcacttgccggctatgttgcaagtttctagc
caacctgctgcaattttgcatcaagcttacgagttattagttaaaatgcaaaaattgcgt
ctcgatcctatggaagaggtgtgctatcgagctatgatgcagctttgcggcgtttatggt
caaccagttttagctgtaaaattattgtttcatatgaaacgtagtggtgttcaacctaat
gctttaacatacggattttacaacaaggctgttctcgaggcaacatggccttctgacatg
acaaattcgagtcagttgatgtggaacaaactgcgaaatgttattgtcggtgcagcttta
tttaaaaaggctggaaagaagagtgctagaagacgactgagctctaacgtggacttttta
accaccgataagactgaaggcatggagcatgcgctctcccggtctagtcttgatagttct
cattctcaagacacagaagctgcgcacagcgattccacgaaaggcagctctgtgtcggat
ttacctggatttggatcgtttgaattaaaagccaagctccttcgacaaaacagtattgtg
aaagatcaagcaacattaagtatgttacagtcggacgagttggatcaggcaccgagtaat
ccaaggctaacgcgcagtgttgaatcaccattaaaaagtcccatacgcacaccagttacg
gaaaatgacccattgggtgctctcattaatgacgaaacaccgattgtgtcaccttccgag
gagaacgattcgaattgctcaacaagtactttaaccgttttaaataatacaactgaagag
agaccaggagggccgctcttatttagaagcaacattctcccacgtagtgcaacctttcat
caagcagtagatgaaagtggtgtgacagtgggcgggcatttacagaggagtgagacgatg
ccgcactccgtggcgcagcagggcgaacaggagagagaaaaggagagactagaaataagc
agtctttggtctcagaataaggatagtgtaacatccagcctctctagcttaggatctagt
cttaaaattagtttcggacgatactccacgggtggattggcatttgctaaaaataaggat
ttaatatcgtcgactcaacttattgaatctcttagtctctccagctacatcagtccatcg
agtttgacagggaagaagtcgaacgagataatactcggtggtctcaacagcttgaagtct
gctgcgacaaccgttgtgaagaaattcgacgaaataaaggaagccatctcggcgacaagt
acgccggtaaaaattaaggaacgcgaacaaaagcttgcctacggcgtatcgcacgaatct
ctggattccctcactgatggatccttacaggatcgaaatgaaacttcgacaagagcgtca
ggtgatggaaatttagatttatgttcattatacgaactcgcagaatgcctgtatccaaag
ggcactagagaattagaagaacgtcttgccatcgaacttgtgctttccagtgcgagtagg
tgtcatcattgcgccgctattctgtacgacgaggagatcatggctggctggcagccggag
gattcaaatttgaacacagtgtgtcagtattgtgacaaggcgaccgtaccccttctcaca
gttacaatattagactacagatgcgaagcgagtgaaaagaataatgaccctttgatggga
gcactggtagaattgttagatcgaccgaaagaatcgttggaacctataacggtgccatat
ttaaatccactagttctgagaaaagaattggagagtgtgttgagtcaagaaggggatgct
tgcctcaccaagcacaggttcatccaggagcatccgatagtgtattggaatctgatctgg
tatttcgaaaggatcaatttaacaagtcatctacccgatctctggctgaacagcgataaa
aacttggaggtgcaaagagcagtaggatcagtaggtgttagaaccatgtgggataacgag
tgtctacacatggatcgtttgcctatgtatcttcaatggaaattaaattctacagaggat
agaacgttaatgcagacagtgatcacgtatgtccgttgcaacgatttagcagaacctata
ataagagtggccttagaaagaagtaaacatcaaacaggcgatcatccgttttctatatac
agagatgtcctgtttctagcatttactgtattaggcaggacgaatattgaccaaggcgtt
tttgacagagaatacagtttatcgctggagaaattctccgagaacgaggaaaagttattg
cataaaattgacgcgccaccgacaatgatgtcggtgtactgcagatattatttcaaacag
ttgaatgtctga
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integrated database retrieval system
