Linepithema humile (Argentine ant): 105670012
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Entry
105670012 CDS
T04898
Symbol
me31B
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105670012 (me31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105670012 (me31B)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105670012 (me31B)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105670012 (me31B)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105670012 (me31B)
mRNA degradation factors
5'-3' decay
Decapping complex
105670012 (me31B)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105670012 (me31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
105670012
NCBI-ProteinID:
XP_012218710
LinkDB
All DBs
Position
7:18171310..18180466
Genome browser
AA seq
445 aa
AA seq
DB search
MMTETHMNSNHNMLNSGLSNKPEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEE
FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDP
RKDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIA
TPGRILDLMDKNVANMEHCKILVLDEADKLLSQDFKGMLDHVISRLPQERQILLYSATFP
LTVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFC
NSTQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQ
AVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIP
KVIDPSLYVARPEDNNSMEEGNVSK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagagacgcatatgaattctaaccacaacatgttgaattctggtttgtctaac
aaaccggaaatagataaaatggatgatgtaggttggaaagcaaagttaaaaattccacca
aaggataaaagaattaaaacaagtgatgttaccgacacacgtggtaacgagtttgaagaa
ttttgcctaaaacgcgaattattaatgggaatttttgaaaagggatgggagaagccatca
ccgattcaagaagctagtattcccattgcactttctggtaaagacattttggcacgagcg
aaaaatggaactggtaaaactggagcgtactcaattccagtattggaacaggttgatcca
aggaaagatgtaattcaagcactggtaattgtacctacaagagagttagcgctacaaaca
tcacagatttgcatcgagctcgcaaaacacatggatataaaagttatggtcactactgga
ggcacgaacttacgtgacgacattatgaggatttatcaaaaagtacaagtgataatcgca
acgccaggaagaattttggatctgatggataagaatgtggcaaatatggaacattgtaag
attctagttttggatgaagcagataaactgctttcgcaagacttcaaaggaatgttagat
cacgtcatatcgagattaccacaggaacgtcagattttgttgtattcagccacatttcct
ctgactgtaaaacaatttatggagaaacacttgagagatccatacgagattaatttaatg
gaagaattgactttgaaaggtgtaacacaatattatgcctttgtacaggaacgacaaaaa
gttcactgccttaacacgctattctccaaattgcaaataacacaaagcataatcttctgc
aattcaacgcaacgcgttgaattactggctaagaaaataacggatcttggatattgctgt
tattacatacacgcgaaaatggcgcaggcacaccgaaatcgcgtattccatgatttccgt
gcaggattatgccgaaatctcgtgagcagtgatctatttactcgtggtattgatgtgcaa
gctgtgaatgtcgtgatcaattttgactttccgaaaatggcagagacatatctgcatcga
ataggccgatctggtagattcggccatttaggtatagcaattaacctaatcacgtacgag
gatcgcttcaacttacaccgtatcgaacaagagcttggaacagaaattaaacctatccca
aaagtgatagatcccagtttgtacgtggcaagaccagaagacaataatagtatggaagaa
ggtaatgtgtctaagtag
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