Linepithema humile (Argentine ant): 105670293
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Entry
105670293 CDS
T04898
Symbol
Cdep
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
lhu
Linepithema humile (Argentine ant)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
FERM_C
RhoGEF
FERM_M
FERM_N
FA
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
PH_20
RHG20_PH
PH_11
PH_8
Motif
Other DBs
NCBI-GeneID:
105670293
NCBI-ProteinID:
XP_012219151
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Position
5:23306799..23342631
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AA seq
1057 aa
AA seq
DB search
MNDIESFGMKGAGSKMPHSHSTPAGVDGGSRTPPTTPRKAGKMLAVRVQMLDDSITMFQV
QAKALGRVLFDQVCKQLHLLEADYFGLEYQEPNYTRYWLDLEKPVCRQVGLSLIDPLLRF
CVKFYTPDPAQLEEEFTRYLFCLQIKRDLAQGLLQCNDNTAALMASYIVQAECGDYVIED
YPDHTYLSTYKFVPHQDQELERRIMENHKKHAGQSPAEADLNLLETARRCELYGMKMHPA
KDHENVPLNLAVAHMGIVVFQNYTKINTFSWAKIRKISFKRKRFLIKLHPEGYGYYKDTV
EFFFETRNECKNFWKKCVENHGFFRCTVVKRVVRQKTRVLSRGSSFRYSGKTQKQIVEFV
RDNYVKRQTFQRSNSFRQTSGGRALQGSEGGGYRGATPSSSLMGSSSISAHPLLPLGDPA
LATPALSLSCGSMTLDSPTTVTSVSMGGTIHRREDTATSFRTLTSIDVHSPATPSQAPVQ
RPMLAIAQRTSSTDVQVEKQEISNKRENNNSVYAAEKSSDKRTTNGGIEVNNASVVNSPD
LSPVKHVRNGEAEETEVRKTKRWPTDKAYYIAKELLMTERTYKKDLDVINVWFREEVSRE
AELEGESVVSLIELLADVHGPCLQEMEARLARWESNARHNIGDFLYNTLLNILPLYDQYL
ENLIPVLEKMEYSMRTSRRFDQLCRDFESQKHCYLPLTSFLLKPLQRLLHYNSIIDRLLD
HYPKDHTDFEDCLAARDRLGETLLEGLTIINQAENLVQLCEMQRDITGFDNLVQEGRRFI
RQGCLQKYSRKGFQQRMFFLFSDVLLYTFRTQQPTQCFRVHGQLPLKGMKIQDADNKTGT
DFAFIIDGNQSSLTVAASNEEEKERWIEDLNMAIAQADASDAKMPYLSLKSCFLGSADEV
GDGLGLEVDRNSCGGAKASQRSNTTVHVCWHRNTSISYSDQLRAFQNQLSGFLLRKFKNS
NGWQKLWVVFTNFCLFFYKSHQDDFPLASLPLLGYTVSTPSEKDGINKDFVFKLQFKNHV
YFFRAESDYTFGRWIEVIRSATQQNHMPVSVNGKEEY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatagaaagttttggcatgaagggagctgggtcaaagatgcctcacagtcat
tcgactccagctggtgtggatggaggtagtagaacacctcctacaacaccaagaaaagct
ggaaaaatgctcgcagttcgtgtacagatgttggatgactctattacaatgtttcaagtg
caggccaaagcactaggcagagtgttattcgatcaagtttgtaagcaattgcatctgttg
gaagcggattactttggtctcgaatatcaagaaccgaattacacaagatattggttggat
ttggagaagccagtgtgcagacaagttggtctatctctaattgatcctttgttgaggttc
tgtgttaaattttatacgccagatcctgcacagctcgaggaagagtttacaagatattta
ttctgtctacaaatcaaacgagatttagctcaaggtttattgcaatgcaatgataacacg
gcagcattgatggctagttatatcgttcaggctgagtgtggagattatgtcatagaagac
tatccagatcatacatatttatcaacatataaatttgtgcctcatcaggatcaagagtta
gagcgacgtattatggagaatcacaaaaaacatgcgggccaatctcctgcagaggcagat
ctcaatcttttagagacagctcgacgttgcgaactgtacggaatgaaaatgcatccggct
aaggatcatgaaaacgttccgctgaatctcgcagtggcacatatgggcattgtggttttt
caaaattatactaagataaatacatttagttgggccaaaatcagaaaaatcagttttaaa
cggaaacgttttttaatcaaattgcatcctgagggctatggttattataaggatacagtc
gagtttttctttgagacgcggaatgagtgtaaaaatttttggaaaaagtgtgtagagaat
catggtttcttccgttgcactgtagttaagagagttgtaagacaaaaaactagagtgctt
agtcgaggatcatccttcaggtacagcggcaaaactcaaaaacaaatcgttgaatttgtt
cgggataattatgtgaagaggcagacgtttcaaaggtccaattcgttccggcagactagc
ggtggtagggcattgcagggctcggaggggggaggctatcgtggggccactccgagcagc
tcccttatgggcagctccagcatctctgcccaccccctcctgcccctcggcgatcctgca
ctggcaaccccagctctgtctctgtcatgcggctcgatgacactggattctccgacgact
gtgacgagtgtctcgatgggcgggacgattcaccgtcgagaagacacagctacatcgttt
cggacgctcacctctatcgacgtccattcgccagccacccccagccaggccccagtacag
cggccgatgcttgctatagcacagcggacttcatcaacagatgttcaagtcgaaaagcag
gagatatctaataaacgggagaacaataattccgtgtatgccgctgagaaatcttcggat
aaacgaacgacgaatggcggaatcgaggtgaacaatgcgagcgtcgtaaattcgccggat
cttagccccgtaaaacacgtgcgtaacggagaagcagaggagacagaagttagaaaaacg
aagagatggccaaccgataaagcctattatatagccaaggagcttctcatgacagaacgg
acgtacaaaaaagatttggatgttattaacgtgtggttccgagaggaggtttctagggaa
gcggaattagagggagaatcggtagtctctttaattgagctactcgccgatgtgcacggg
ccgtgccttcaagaaatggaggcgcgtctggcacgttgggagagcaacgctcgtcacaat
atcggtgacttcttgtacaataccctattgaacatactgcctctctacgaccaatacctg
gagaatctaattccggtattggagaaaatggaatactctatgcgaacgtcacgacgcttc
gaccagctttgccgagatttcgagtcgcagaagcactgttacctgccattaacttcattc
cttttgaaacctttacaacgattattgcattacaatagtattatcgacagattattagat
cactatccgaaggatcataccgacttcgaggactgtttggcagcgagagatagactcggc
gagacattactagagggactcacgattataaatcaagcggaaaatctggtgcaactgtgc
gaaatgcaaagggacataactggatttgataatctggtgcaagaaggtcgaagatttatt
agacaaggttgcctgcagaagtatagccgcaaaggctttcaacaacgcatgtttttcttg
ttctcagacgtgttactgtatacattccgtacgcaacaaccaacgcaatgtttccgtgta
cacggccagcttccattaaaaggaatgaaaattcaagatgcggataataagactgggacg
gattttgcatttattatcgatggaaatcaatcatcattaacagtagcagcaagtaacgaa
gaagaaaaagaaaggtggatagaagatttgaatatggctatagctcaagctgatgcgtcg
gacgcaaaaatgccgtatttaagtttaaagtcttgctttctaggatcagccgatgaagtg
ggagatggtttaggattagaagtagatcgaaatagttgcgggggtgcaaaggcgtcgcaa
cgtagtaatactacagttcatgtttgttggcatcgcaatacgagtattagttacagtgat
cagctacgagcgttccaaaaccagcttagtggatttcttttacggaaattcaagaacagc
aacggttggcaaaagctctgggtcgtattcaccaacttctgcttattcttctacaagtct
caccaagatgacttcccattggctagtttaccattattaggatatactgtttccaccccg
tcggagaaagatgggatcaataaggactttgtattcaagctgcaattcaaaaatcatgtg
tatttcttccgagcagaaagcgattatacttttggaagatggatcgaagtcattcgaagc
gcaactcagcagaatcatatgcctgttagcgtgaacggtaaagaagaatattag
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