Linepithema humile (Argentine ant): 105670345
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Entry
105670345 CDS
T04898
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105670345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105670345
03009 Ribosome biogenesis [BR:
lhu03009
]
105670345
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105670345
Spliceosome [BR:
lhu03041
]
Complex A
U1 snRNP components
U1 related factors
105670345
Complex B
105670345
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105670345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105670345
NCBI-ProteinID:
XP_012219238
LinkDB
All DBs
Position
3:complement(31466588..31473371)
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AA seq
615 aa
AA seq
DB search
MFSHDRDQGRSSRGGSVRTEATSRGSSDNGRGQITSRFGTPSRGGVSNVRGGLKGKQPGG
GLRKMNWDLRTLEPIRKDFYIEHSGVRNRSDQEVNQFRESAEITVKGDNVPNPIQYFEEG
TFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLVGIAQTGSGKTLGYILPAIVHIIHQ
PRLSNGDGPIVLILAPTRELAQQIQEVANCFGESAAVRNSCIFGGAPKGPQAHDLERGIE
ICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWS
ATWPKEVRALAEDFLTDYVHLNIGSLTLSANHNITQIIDVCQEYEKDSKLNRLLQEIGTE
KENKTIIFVETKRKVDDITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRTGRAPILVATD
VAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRKRQTGTAYAFFTSHNMKHAGDLIEV
LQEAGQNVNPRLSEMAEMAKAGNFAGRSGKRFGGSSGGISTDRGNARRTNDSRGRGGSTR
GRGTSRAGSAYQPPSSAYSGSDYSNYSTIKPNTSLSQNTTYGYSTQRNYGQSSMPQNYGG
GDNYGSGYSYRSTTY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcatgaccgggatcagggtagaagcagtcgtggcggttctgttagaacggaa
gctactagcagaggaagcagtgataatggacgtggacaaattaccagtagatttggcact
cctagtagaggaggtgtgagtaatgtacgaggtggattaaagggaaaacagcctggtggt
ggcctaagaaaaatgaattgggatcttcgtactttggaaccgatacgcaaagatttttac
atagaacactctggagtcagaaacagatccgatcaagaagtaaatcaatttcgagaaagt
gcagaaataactgtaaagggtgataatgttcctaatcctatacaatactttgaagaggga
acttttccgccttatgtgatggagggtattcgtagacaaggatactcacagcctacaccg
attcaagctcaaggatggcctattgctcttagcggcagagatcttgtcgggatagctcag
actggttctggaaaaacgcttggatatattttacccgcaatcgtgcatatcatacatcaa
ccgcgcctaagcaacggagatggtccaattgttttgatcttagcaccgacgagagaatta
gcgcaacaaattcaagaagtagctaactgctttggggagtctgcagctgtgagaaactcg
tgtatttttggtggtgcaccaaaaggaccacaggcacacgatttggagagaggtattgag
atatgcattgctacgccaggaagacttatagattttttagaaagaggaactacaaattta
cgtaggtgtacatatctggtacttgacgaagccgatcgcatgttagacatgggattcgaa
ccccaaatacgaaaaataattgagcagatacgtcccgatagacaagtgctgatgtggtca
gctacatggcctaaagaagttcgcgcgctcgcggaggattttttgacggattatgtacat
cttaatatcggttctttgactttgtcggccaatcacaacatcactcaaattatcgatgtt
tgtcaagaatatgagaaagattcgaagttgaatagactgcttcaagagattggcactgaa
aaagagaataagacaatcatatttgtggaaaccaaacgtaaagtcgacgatatcacgaga
aacattaggcgcgacggatggcaagctgtgagtattcacggtgacaaaaatcaacaagaa
agagatcacgtgttacaagaatttcgtactggaagagcgccgattttagtcgcgaccgac
gtagctgctagaggcttggatgtggatgatgtgaaatacgtgataaattttgattatcca
tcctcgtcggaagactacatacatagaattggtcgaaccgggcgtaaacggcagaccgga
acagcatacgcattcttcacgagtcacaatatgaagcacgccggagacttgatagaagta
ttgcaagaagccgggcagaatgttaatccacgtcttagtgagatggcggagatggccaag
gctggaaatttcgccggcagaagtggaaaacgtttcggtggttcttctggtggtatcagc
actgacaggggtaatgcccgaagaactaatgatagtagaggaagaggcggttcgacaaga
ggaaggggtacatctcgcgccgggagtgcttatcagcctccctcgagtgcttattcggga
tcggattacagtaactatagtactataaaaccaaatacttctttgagtcagaacacgacg
tacggatatagcacgcagagaaactacggacagagcagtatgcctcaaaattacgggggt
ggcgacaactacggaagtggttattcatatagaagcacaacctattaa
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