Linepithema humile (Argentine ant): 105670478
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Entry
105670478 CDS
T04898
Symbol
Nipped-B
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105670478 (Nipped-B)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105670478 (Nipped-B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
105670478
NCBI-ProteinID:
XP_012219437
LinkDB
All DBs
Position
2:complement(23538309..23549009)
Genome browser
AA seq
2260 aa
AA seq
DB search
MPERIKLKMNGVVPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAEEAQ
ILLSVRDENLVPQLIMSLSQTSSDHIELKDNYANTEQSLENEQNTPELLKAILQINPHVF
RGPQHNSPRNWTQGGTPILHANQSPASYGRFSPSYSSSSGSRQTPQGSPAHPAAARSVLP
PPVASGIAHAQHPRMPITPQNHADISQMSPFAVPSPSPRGNVMTEQTRTMTTPQHMQEDA
NCINPLSNITLQPNIYSPAHMSSPSTPLTPLGNVTPQHHNMAGMTPQHNMHMTSPMRTSM
PLQQQHPSMGMQQNLYDPMMNQQVHHALGSNPLDIDSAVQENQQFLLDPVSGLSDIDLPI
ESIDTKQGVDHAVHLLPTAQTTSYPNIHATDMVNTLDPTAVGVADVQQNNNSEKKLAGTL
AEKLKEPVVMLNRLSLADQALMQKSLAAFAEKSPSRAAKMGISNRDDAKTDSESEEEIGK
NNKYFKARAKERQVQREKERTERRKSDDKTRRRKRITDEDEEDDKRDAPYTPTKPKIRKI
EKKLVPVLAKLSVEELMETNTYQRFNSTIETIFENTEDITANADMEDDGDVAAEMLIPKY
QLHDLCTEAAKLKTLGAMESIPSDRLVRLLNILEKNIRDGARVSPLVDPDDDVEEGRLWM
QLAMERVQRAVDASLIALHIMTSSNMPKTVYLEDVIDRIVLFMKFQLQNTIYPSFDPVYK
IDTKSKNKTDTFNSSGRKKRGHMKEVREKSILQVYNKMHELVGLLAELLNIQVLTDTSVL
HASSLGVAPFFVESVSDLQLSALRLVTIIFTKYEKHRRLLLDDILASIARLPSSKRSLRT
YRLNSEDHIQMLTALVLQLIQCVVVLSDSKSKEDDEKKPSHVDADVFIINRYETATRIAG
NFLTVFLNKCGSKGEEIDYRPLFENFVQDLLATVNKPEWPAAELLLSLLGNLLVGHFSNK
SSDMSLRVASIDYLGVVAARLRKDAVSSQCKLSTIDQIIRDIKLEQQKDSDYDQIKDKEI
VGLSEDEERTVFLQKVLLDYLAVNGTKDSALGYARHFYLAQWYRDCALEKSLVGQSGKNS
PTKIKVNKKRSKKKNRHHNSDQDTESELDEQDPDENDNNEQKNSEAYRIIEEKKKYIISR
IRPCSTGTKPDILQTYIDYNSAELISQYLASKRPFSQSFDKYLKQILHVLTESSIAIRTK
AMKCLTMIVEADPSVLARVDMQLGVKHSFLDHSTSVREAAVDLVGKFVLSRPELIDTYYD
MLSARILDTGVSVRKRVIKILKDICMECPDFPKIPEICVKMIRRVNDEEGIRKLVMEVFQ
NMWFTPVRERPTLDSESLLRKVINITDVVAASKDMGLEWFEQLLVSLFKPKEDKDDSTKM
QTEPPRVLLTACKQIVDCLIENVLRLEETNLDSDKPGKKGSSQRLVACLTTLYLFAKIRP
RLLVNHASTLQPYLSLKCQTQGDYQIISSVAHTLELVVPLMEHPSEMFLAQLEEDSVKLI
LQHDKSVVASCLSCLGSIVNNVTRNFKLIRDCFKKYYGHLTWYKSFYEKDPTNPMLLKYR
PYFRRALFTVGLLLRHFNFMDPEVIEGLADNIKDQVFETLSYFVHLDNDDIRHFTLSAIG
SLCIRHYEFMMLPELQELYHHLLTSEHALVQMRIQVLNNIEVYLQEEEKRMIKQDQEWAK
MSKQENLKEMGDVSSGMASTVIQHYIKQILESFLHANISVRRAALKVIQLILAQGLVHPV
QIVPYLICMSTDCEKAVSHSADKQLQDIEKKYPGFIHMKSQFGIKLSYRLQKILQNDITV
RGMRAKDGEFPGALNGFLYTILRSTKQQRRAIVISFLKHFDEAAKSSLSQMLYLADNLAY
FTYQVQDEPLFIIHHIDIIISMSGTNLLQSFKEALLPKEGGAQSHSQSGPSGQMVHMFEQ
TAPQIAAVAAAAAAAATAAAAAAAAATTTTTAAATAAAPDNQPKSNQLAIEDEEDDEEDE
EAILARLPDNTTLLREYITASQGFLLLLTLRQHLKDLYGFSDAKIGQYSPMEGAKVYEKA
VNRKNNLHFEPKATLQRLRDGATDVKKELDLSGRKKLVKEYLDFKQLMLKFDPEEPDDDG
GNDHGAAHTSAGGKHSAENPQRARIQLHPAAVGSRMIADGAVPGDSAVLAVAGGQQQFQL
PLQPNLNSVPMEHPNNSMNSLPMAAAAAAAAATAAATPMTMPRVPKLTIHANPDARESHR
KQRAHKTDKSVRKHKKKKRRRISDSSDSGGEDFSDPDFLV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgaatcaaactcaaaatgaatggggttgtaccgagtgtgccaataactacc
ctcgctggtattgcgagtctcaccgacttgttacctgaaatgcccctaccgactccgctg
ccgcaaactctgactaacaagtcgctgctgtttcacccacgagtagcggaagaagcccag
atattgctaagcgttcgcgatgagaatctcgtgccgcaattgataatgtctctgtcacag
acttcatcggatcacattgaactcaaggacaattatgcgaataccgagcaatcgctagaa
aacgagcagaatacgccggaattgctgaaggcgatcttgcagataaaccctcacgtattc
agaggaccccagcacaattctccgagaaactggacgcagggtggtacacctatattgcac
gcgaatcagtcgccggcgagttatggtcgcttctcgccgtcctactcgagttcttcaggc
tccaggcaaacgccccagggtagtccggctcatcccgcggcagccagatccgtactaccg
ccgccggtagccagcggtatcgcccacgcgcaacatccgcggatgccgatcacgccgcag
aatcacgcagacatttcgcagatgtcacccttcgccgtgccttctccgtcgcccagaggc
aacgttatgaccgaacaaacaagaacaatgacaacgccccagcatatgcaggaggacgca
aactgtataaatcctctgtcgaacataactctccaaccgaatatatactcgccggctcat
atgagctctcccagcacaccactcacgcctctcggcaatgtgacgcctcagcaccataac
atggctggtatgacgccgcagcacaacatgcatatgacatctcccatgcgcaccagcatg
cctcttcagcaacaacatccgagcatgggtatgcagcagaatctttacgatcctatgatg
aatcagcaagtgcatcacgcattgggcagcaatccgttggacatcgacagcgcggtgcag
gagaatcagcagtttcttctcgatccagtgtccggtctttccgatattgatctgccgata
gagagcatcgacacgaagcaaggcgtggatcatgcggtgcatttattgccgactgctcaa
accacgtcttatccgaacatacacgccaccgacatggttaacaccctggatccgactgcg
gttggcgtagcggatgtacaacagaataacaattcggaaaagaagcttgccgggacactg
gcggagaaactgaaggagcccgttgtcatgttgaacagattatcactggctgatcaagcg
ctcatgcagaagagtctggcggcattcgcggagaagtcgccgagtcgcgcggcgaagatg
ggtatctccaatcgcgacgacgcgaaaaccgactccgagagcgaggaggagatcggcaag
aacaacaagtacttcaaggcccgcgcgaaggagcgacaggtgcagcgggagaaggagagg
accgagcgacgaaagagcgatgacaagacgcgcaggcggaaaaggataacggacgaggac
gaagaggatgacaaacgtgacgcgccgtacacgccgacgaaaccaaaaatacgaaagatt
gaaaagaagctagtgcctgtattagccaaattgagcgtggaggagttaatggagaccaat
acgtaccagcgatttaactccaccatagaaacgattttcgagaacaccgaggacatcacg
gcgaacgccgacatggaggacgacggcgacgtggctgcggaaatgcttattcctaaatat
cagctgcacgatctctgtacggaagcagcgaaactgaaaaccctaggcgctatggagtcg
ataccctcggacagattggtgaggctgctgaatattctggaaaagaacatacgggacggc
gccagagtgtcgccgctcgtggatccggacgacgacgtcgaggagggacgattgtggatg
cagttggcgatggagcgagtgcagcgcgccgtggacgcgtcgctgatcgcgttgcacatc
atgacttctagcaatatgccgaagactgtctacttggaggacgtcatcgatcgaatagtt
ctttttatgaagtttcaactgcagaacacgatctatccttctttcgatcccgtttacaag
atagatacgaagagtaagaacaagactgacacttttaattctagtggacgcaagaagcgg
ggccacatgaaggaggtgcgcgaaaagagcatcctgcaggtttacaacaagatgcacgag
ctggtgggtctgctggccgagttgttgaacatacaggttctcacggacacgagtgttctt
cacgcgtcatcgttgggcgtcgcgccgtttttcgtcgagtcggtgagcgatcttcaactg
agcgcattgagacttgtcactataatattcaccaagtacgagaagcacaggagactgttg
ttggatgacatcctggcatccatagcgagactacccagcagtaaaaggagcctgcgcacg
tacaggctgaactccgaggatcacatacagatgttaaccgcgttggttttgcagctcatt
caatgcgtggtggttctgtcggattccaagtcgaaggaagatgacgagaagaagccgagc
cacgtcgacgccgatgttttcattatcaatagatacgaaactgccaccagaatcgccgga
aattttttaacagttttcctcaacaagtgcggcagcaagggcgaggagatcgattacaga
ccgttgttcgagaatttcgtgcaggacttgctcgcaacggtgaataaacccgagtggccc
gccgctgaattgctgttgagtctcctcggaaatctgctggtaggacacttttccaacaaa
agttccgatatgtcccttcgagtggcttccatcgactatctcggtgtggtggcggcgaga
ttacgcaaggacgcggtcagttcgcaatgcaagttgtccaccatcgaccaaattatacga
gacatcaagctcgagcagcagaaggactcggattacgatcaaataaaggacaaagaaatc
gtgggactgagcgaggacgaggagagaacggtatttttgcagaaggtactcttggattat
ctggccgtgaacgggacgaaggactcggctctcggatacgcgcgtcatttttatctggcc
caatggtaccgggactgtgcgctggaaaagtctctggtgggtcaatcggggaaaaacagc
ccgaccaagatcaaggtgaacaagaagcggtcgaagaagaagaaccgccatcacaacagc
gatcaggacaccgagtccgagttggacgagcaggatccagacgaaaacgacaataacgag
cagaagaattcggaggcttaccggatcatcgaggagaagaagaagtacatcatcagcaga
ataagaccgtgcagcacgggaacgaaaccggacatccttcagacgtacatcgattacaac
tcggcggaactgatttcgcagtatctcgcgtccaaaagaccgttctcgcagagcttcgac
aagtatctcaagcagatccttcacgtattgacggaatcatcgatcgccattagaaccaag
gcgatgaagtgtctcaccatgatcgtcgaggccgatccgagcgtgctggcgagagtggac
atgcagttgggcgtcaagcattcgttcctcgatcactcgacgtccgtgcgagaggcggcg
gtggatttggtaggaaaattcgtactgagcagacctgaattgatcgatacgtactacgac
atgctatcggcgagaattctcgacaccggcgtgagcgtgaggaagcgcgtcattaaaatt
ctcaaggacatctgcatggagtgcccggacttccccaaaattccggagatatgcgtgaag
atgataaggagggtgaacgacgaagaaggcattcggaagctcgtcatggaagttttccag
aatatgtggttcacaccggtgagagagcgtccgactctcgactcggaatcgttgctgagg
aaggtaataaatattacggacgtggtggcggccagcaaggacatgggactcgagtggttc
gagcagcttttggtgagtctgtttaaaccgaaggaggacaaggacgacagcacgaagatg
cagacggagccgccgcgagtgttgctgacggcgtgcaaacagatcgtggattgcctgatc
gagaatgtgctgcggctggaggagacgaatctggattcggacaaaccgggcaagaagggt
tcgtcgcaaaggctagtcgcgtgcctgacgacgctttatctgttcgcgaagattcgaccg
cggctgctggtcaatcacgcgagcactctgcagccttatctgagtctcaagtgtcagacg
cagggcgattatcagatcatcagcagcgtcgctcacacgctcgagctggtggtgcctctg
atggagcatccgagtgaaatgtttttggcgcagctggaggaggactcggtgaagctgatc
ctgcagcacgacaaatcggtggtcgcgagctgcttgtcgtgtctgggctccatagtcaat
aatgtcacgcgaaacttcaagctgatacgagactgcttcaagaaatattacggacacttg
acgtggtacaaatcgttttacgaaaaagatccgacgaatccgatgctgctcaagtaccgg
ccgtatttccggcgagcgctcttcacggtcggtctattactgcgccattttaactttatg
gatccggaggtgatcgaaggcctggcggacaacatcaaggatcaggtcttcgagacgctc
agctacttcgttcatctggataacgacgacatccggcacttcactctgtccgccattggt
tctctttgcatacggcactacgagtttatgatgctgccagagctgcaggagctctaccat
cacctgctcacgtcggaacacgcgctggttcaaatgaggattcaggtactcaataatatt
gaggtgtatttgcaggaggaggagaagcggatgatcaaacaggaccaggagtgggcgaaa
atgtcgaagcaggagaatctgaaggagatgggtgacgtgtcgtccggtatggcgagcacc
gttatccagcattacatcaagcagatactcgagtcctttctgcacgccaatataagcgta
cggcgcgcggctctcaaggttattcagctgattctggcgcaaggcttggtgcatcccgtc
cagattgtaccctatctgatctgcatgagcaccgactgcgagaaagccgtgagtcacagc
gcggacaagcagctgcaggacatcgagaagaagtatcccggcttcatccacatgaaatcg
cagttcggcatcaaactgagctatcggttgcagaagatcctgcagaacgatatcacggtg
agaggcatgcgggcgaaggacggcgaattcccaggcgcgctcaacggcttcctctacaca
attctacgcagcacgaagcaacagagacgtgcgatcgtgatctcctttctcaagcacttc
gacgaggccgccaagagtagtctgtcgcagatgctgtatctagcggacaatctcgcctat
tttacatatcaagtgcaagacgagccgctcttcatcatccatcacatcgacatcatcatt
tccatgtccggtacgaatttgctacaatcttttaaggaggctctgctgcccaaagaaggc
ggtgcgcagtcacactcgcagtcaggaccatccgggcagatggtgcacatgttcgaacaa
accgcaccgcaaatagcagcagtagcagcagcggcagcggcggcagcaacagcagcggca
gcagcagcggcagcagcaacaacaacaacaacagcagcagcaacagcagcagcaccggat
aatcaaccgaaatcaaatcagttggctattgaagatgaagaagacgacgaggaggacgaa
gaagctattctggctagattaccagacaacaccaccttgctcagggaatatattaccgcc
agtcaaggctttctacttttattgacgctgcggcaacacctcaaggacctctacggcttc
tccgacgcgaaaatcggtcaatattcgcctatggaaggagcgaaagtctacgagaaagcg
gtgaatcgcaagaacaatctacatttcgagcccaaagccacgctgcagaggctgcgggac
ggcgcgactgacgtgaagaaggagctggacttgagcggcaggaagaagctcgtgaaagaa
tatctggacttcaagcaactgatgctcaagtttgatcctgaggaaccggacgatgacggc
ggcaacgaccacggtgccgcccacaccagcgccggcggcaagcacagcgcggagaatccg
caaagagcgaggatacagctgcaccccgcggccgtcggcagcagaatgatagcggacggc
gcggtcccgggagacagcgccgttctggctgtcgcgggcggccagcagcagtttcagtta
ccgctgcaaccgaatctgaattccgttccgatggagcatccgaacaattcaatgaactcg
ctgccaatggccgctgccgcggctgcggcggcggcgacggcggcggcaactccgatgaca
atgccacgagtgccgaaactgacgatacacgccaatccggacgctagggagtcgcaccgc
aagcagcgcgcgcacaagacagacaagtcggtgagaaagcataagaagaagaagaggaga
agaatctccgacagcagcgacagcgggggcgaggacttcagtgaccctgacttcctcgtg
tga
DBGET
integrated database retrieval system
