Linepithema humile (Argentine ant): 105670588
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Entry
105670588 CDS
T04898
Symbol
dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X2
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04140
Autophagy - animal
lhu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105670588 (dor)
04148 Efferocytosis
105670588 (dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105670588 (dor)
Membrane trafficking [BR:
lhu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105670588 (dor)
Hops complex
105670588 (dor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING_5
zf-RING_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3H2C3
TPR_NUP120_160
zf-C3HC4
zf-rbx1
COMP
zf-RING_UBOX
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
105670588
NCBI-ProteinID:
XP_012219609
LinkDB
All DBs
Position
8:complement(7610226..7616367)
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AA seq
984 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVLAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDRILYL
VVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKISGLFLDPLGHHLLISLVSK
HGDNPPSELFYLHRKTAKLKQAGKFKGHEITAVGWNFSNTSETTSGSILLGTSKGLIFET
EIGLETDKIFNTSLEQYWRQVFDIGKNSKPPITGIEFHKIPNCDKYMIIVTTLMRIYQYI
GAIANPEEKPLLQQVFYRYLNAQESFSEVISSLPYSKMQFYYPSLGAVPKSFGWLTETGI
LYAQVDAKPDTNNVLINQQMLTCPEMSLISSNISQTTSAPLSFVLTEFHALLLYPDHVKG
MSLLNQELIFEDVYNDVLGKLIGITKDPATRSIWAYSERAVFKYRVTKEDRNVWQVYVDK
GEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYADTHSSFEEISLKFLQEWQ
IDALKTFLRKKLDGLKTHDKTQITMIVIWVTELFMNQMGALRSSNTSYLHDPHYIELQKQ
FDSFLIIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHCNYEEVIRQHLYKNNYLEA
LGVLKSQNNKDLFYQFAGILLQELPRPTVAVLISQGSSLKPAKLLPALISCNSDDKHARE
IIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQGQDISMVHYDVHYALRLC
QEVNLTEACVQLSALLGLWSTAMDLALTISVDLARQIAAMPPEHDEELRKKLWLKIAEHV
VREKDDIQQAMEFVQHCNLVRIEDILPFFSDFVTIDHFKEAICNSLQEYNQHIQDLKEEM
QEATKAAELIRKDIQAFRTRCTYVHAKDTCNTCEVQLLLRSFYVFPCGHKFHSDCLVAAL
TPMLSMEQRTRLADLQRQLTAISNRPEDTTSVTSVSLSTRDQIKADIDELVASECLYCGE
LMIESIDKPFIEEEDYERVLKEWT
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatgtttgatcagtacgaacaagcttctcaacgctccaaacaagtgcttgca
ccaccgatacgtccagatattagtacagcaggctttattcagatgaagctgcaagatgat
gggccaatattcactaagcagaaagttaactttctaccatcggacagaattctttacttg
gtcgttagtagcaatacaattgtcattgctatggccaacaacattctacttcgtatcgac
atgaagcaacctgacaagactgaagaaattgacatatccaaatatgcactgagcatgaaa
atatccggcttgtttctggatccattgggccatcacttgctgataagtctggtgtcgaaa
catggggataatcctccttcagaattattctacttgcataggaagacggcaaaactcaag
caggctggcaagttcaaaggccacgaaatcaccgcagtaggctggaacttttccaatact
tcggaaacaacctctggctccattctgttgggcacttccaaaggtctgatttttgaaaca
gagattggattagagactgacaagatttttaatacgagtttggagcaatattggcgtcag
gtattcgacatagggaaaaatagcaagcctccaatcactggaatagaattccacaaaatc
ccgaattgtgataaatatatgatcattgtgaccactcttatgcgcatttatcagtacatc
ggtgccatcgctaatcccgaagaaaagcctcttttgcagcaggtgttttacagatatctg
aatgcgcaagagagctttagtgaagtgataagttctcttccctattcaaaaatgcaattt
tactatccatccttgggtgctgtaccaaaatcattcggatggttgacggagactggtatt
ctatacgcccaggttgatgcaaaaccggatacgaataacgtgctgattaatcaacagatg
ttgacatgtccggaaatgagtcttataagcagtaacatttcacaaactacttcagcaccg
ttgtcattcgtgttgacagagtttcacgcgttattgttgtatccggatcatgtaaaaggc
atgtcgctcttgaatcaagaattgatatttgaagacgtttacaatgatgtactcggcaaa
ttaatcggcatcactaaggatccggcgacgagatcaatttgggcttacagcgaacgagca
gtcttcaagtatagagtaacgaaagaagataggaatgtttggcaggtatatgtcgataag
ggtgaatttgaactggccaagcagtattgcaaagacaaccccgcacacattgaccaagtg
ctggtgaaacaagcggagatgcttttcaagaacaaagaatatgagaagagtgcgttaatt
tacgcggacactcattcgtccttcgaggagatatcgttaaaatttctgcaggaatggcaa
attgatgctctgaaaacatttctgcgcaaaaaactcgatggcttaaaaacgcacgacaag
acacaaataacaatgatcgtcatatgggtgacggaattattcatgaatcaaatgggagct
ctgcgcagcagcaacacatcctatcttcacgatccacattatatagaattgcagaagcag
tttgatagcttcctcatcattcccaaagtagaggaatgcatcaagaggaatcgcagcacg
atatacgacctgatggccagtcacggtgacaaggacaatttgatacgtttgacgataatg
cattgcaactacgaggaggtgattcgccagcatctgtacaagaataattatttggaggcg
ctcggggtactcaagagtcagaacaataaggacctcttctatcaattcgctgggattcta
ctgcaagaattgccgcgacccaccgtggccgtcttaatctcgcaagggtcatcgctgaag
ccggcgaagcttctgccagctttgatctcttgcaacagtgatgacaagcatgcgagagaa
attattaagtatctagaattttgcgtatacaagcaaggttcgcaggagcaggcgattcat
aacttccttctatctttgtacgcgcgttacaagcaagacgaagtgatgcgctacataagc
tctcaaggtcaagacatcagcatggtgcactacgacgtacattacgcgttacgattatgt
caggaggtaaatttgactgaagcctgcgtgcaattatcggccttactgggtttgtggagt
accgccatggatctcgcccttacgatcagcgtcgatctcgctaggcagatcgccgccatg
cctcccgaacacgatgaggaacttagaaagaaattgtggctgaagatagcggagcacgtt
gtgcgagaaaaggacgacatacagcaagcaatggagttcgtgcaacactgcaatttagtt
agaatagaagatattctgccgtttttctccgattttgtcaccatcgatcacttcaaggaa
gctatttgcaactccttgcaggaatacaaccaacacattcaagatcttaaggaggagatg
caggaagccacaaaggcagcagaattaataaggaaagatattcaagcctttagaaccaga
tgcacttacgtgcatgccaaagatacgtgcaatacatgcgaggtgcaattgcttttgaga
tccttctacgtattcccttgtggccacaaatttcatagcgattgtttggtggcggcatta
acgccgatgctatctatggagcagaggacaagattagcggatcttcaacgacaacttacg
gccatttcaaatcggccagaggacaccacctcggtgacgtcggtatccttatctacgagg
gaccagatcaaggccgatatcgacgagctcgttgcttcggaatgtctctactgcggagag
cttatgatagaatcgatagacaagccgttcatcgaggaagaggattacgaacgcgtgctg
aaagaatggacgtga
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