Linepithema humile (Argentine ant): 105670616
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Entry
105670616 CDS
T04898
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105670616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105670616
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105670616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Vps41
WD_LRWD1
Beta-prop_EIPR1
Svf1_C
WDR54
Motif
Other DBs
NCBI-GeneID:
105670616
NCBI-ProteinID:
XP_012219655
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Position
6:3251724..3254590
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AA seq
525 aa
AA seq
DB search
MASFKKINTKVFTRAGPELTEDNIYWKKYTPPVLVKEFGPIDYIDFSPVEPHYFAVTCSV
RVQVYNPITKLVTKTYSRFKEAAYGGCFRRDGKLLCAGGEETVVRLFNIGSNSMLRLFSG
HKAAVHRAFFTADDHHIASFSDDKTVILWDIPSEKQLMSFNEHTDYIRAGAVSPVSTDVL
LSGGYDKIIHMYDSRTNKKILSVNHDAPVESLLFLPTGGIFLSAGGTDIKVWDALTGGKL
LAKITQHHKTVTCLKIASDGHRILSGSLDRHVKVYDAGTYKTLHTLDYPNAVLSIGISAG
DETVVAGMVDGLISVRRREEDVKDVVKPKRKKVSYRHAGENLHVRSIDVVVQQEVKEIMS
KHDACLRKFQYSKALDCVMMNYVVNKMPHVTVALTQELIRREGLRRALAGRDGKSLVNII
KFLNKYIGSIRFGRVLLHVSNVLLDVYEDHLDELSEESRKMFTILAQKLQEEEQLITALA
ELQGSMQMVLSSAESVSSISAVKDSQSLEPSNAAQTERDLVLSIA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcaagaaaataaatactaaagtgtttaccagagcggggccggaattaaca
gaagataacatatattggaagaaatacacacctccagttttagtcaaagaatttggccca
atagactacattgacttttctcctgtagagcctcattattttgcagttacctgctctgta
cgagtgcaggtatataatcctatcacaaagttggtcacaaaaacgtacagcagatttaaa
gaagctgcatatggaggttgtttccgtagagatggcaaactgctgtgtgccggtggagag
gaaacagtggttagactctttaatattggttcaaatagcatgttacgtcttttttctgga
cataaggctgcggtgcatagagcttttttcacagctgatgaccatcacatagcttcattc
tctgacgataaaaccgtaatattatgggatatacctagtgaaaaacagctgatgagtttt
aatgaacatactgattatatcagagctggtgctgtgagccctgtgtctactgatgtatta
ttatctggtggatatgacaagatcatacatatgtatgatagcagaacaaataaaaagata
ctcagtgtcaatcatgatgcgccagtggaaagtttactctttttgccaactggaggaata
ttcttatctgcaggtggaacggatatcaaagtgtgggacgctctaacaggtggcaagtta
cttgctaaaattactcaacatcacaaaacggtcacttgcttgaaaattgcctccgatggc
catagaatattgtctggttcattggataggcatgttaaagtctacgatgctggaacatac
aagacacttcatactttggattatcctaatgcggttcttagcataggaattagtgctggt
gacgagacagtcgtagccggtatggtggacggtttgatttctgtgaggagacgcgaagaa
gacgtgaaggatgttgtgaaaccgaaacggaaaaaggtgtcgtacaggcacgcaggcgaa
aatctgcacgtgcgaagtattgacgtggttgtgcagcaggaagtcaaagaaataatgagc
aagcacgatgcttgtttgcgaaagtttcaatacagtaaggcactcgattgcgtcatgatg
aattatgtggttaataaaatgccgcatgtcaccgtcgcacttacacaagagcttatcaga
agggaaggcttaagacgagctttagctggtagggatggcaaatcactggttaatatcatc
aagttcttgaacaaatatatcggtagcattcgtttcggccgagtgttgttacatgtttca
aacgttttattagatgtatacgaggaccacttagacgaactttcggaagaatctcggaaa
atgttcacgatattagcgcaaaaactacaagaagaggaacagttaattacagctttggca
gaattgcaaggttccatgcaaatggtattgtccagtgcagaatcggtttcttcgatttct
gctgtaaaagatagtcagagcttggagccgtcaaatgccgctcagacagaaagagatctt
gtcttgagtatagcataa
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