KEGG   Linepithema humile (Argentine ant): 105670698
Entry
105670698         CDS       T04898                                 
Symbol
Sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105670698 (Sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lhu03041]
    105670698 (Sf3b6)
Spliceosome [BR:lhu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105670698 (Sf3b6)
 Complex B
    105670698 (Sf3b6)
 Complex C
   U2 SnRNP specific factors
    105670698 (Sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_8 Phytoreo_Pns RRM_7
Other DBs
NCBI-GeneID: 105670698
NCBI-ProteinID: XP_012219784
LinkDB
Position
1:complement(21916241..21917183)
AA seq 125 aa
MTMAMLQRRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGT
AFVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRIDVDKKMEDLDKLKTKYNL
NEEKK
NT seq 378 nt   +upstreamnt  +downstreamnt
atgactatggcaatgttgcaacgtcgtgccaatgtaaggctaccacccgaagtaaacaga
gtgttatatatcagaaacctaccatataaaatcacagctgaagaaatgtacgatatattt
ggcaaatatggagctatcaggcaaattagagtaggtaacacagctgagacaagaggcaca
gcgtttgttgtatatgaagacatattcgatgcaaagaatgcatgcgaccatttaagcggt
ttcaatgtatgtaatcgttacttggtggttttatattatcagagcaataaggcatttaag
cgaattgatgttgacaaaaagatggaggacctagataaattaaagacgaaatataattta
aatgaagagaaaaagtaa

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