Linepithema humile (Argentine ant): 105670785
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Entry
105670785 CDS
T04898
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105670785
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105670785
Spliceosome [BR:
lhu03041
]
Complex C
Other components
Complex C specific factors
105670785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105670785
NCBI-ProteinID:
XP_012219927
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All DBs
Position
2:22011728..22020214
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AA seq
683 aa
AA seq
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MFRPVFSKPGDSMWQEDKPDIDAHSSTQFVYNAHHSLALDMQRQRLPIFKNKAHIIYLLE
KYQTLVLVGETGCGKSTQVPQYLLEAGWCADGKKIGITEPRRVAATSLANRVADERNCIL
GTTVGYCIRFDDYTDETTKIKYMTEGILLRELMSDPLLTSYSVIILDEVHERTLLTDIIM
GLLKKIIRKRKSLRIIVSSATVDAEELRDFFNINTTKDSSKDSAVIMSVEGRLYPVEVFF
LKEPVANYINGVVDTTLKIHETEEPGDILAFLTGLDEVDQVVSLLSEHAKLIKDGKQKLF
PLPMYGSLPNAEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWFEAE
TQTNNLVIVPVSRASADQRAGRAGRVRTGKAYRLYTEEAYAGLFEATPPEMQRSDLAPAI
LQLKALGIDNVLRFNFPSAPPSKNLVTGLELLYALGAIDSNGDLTMPLGLTMAEMPLEPV
LAKSLIVSGEMGCSEEITMIFAMLQVQNVFIQPGGGQAALKARIAHRKFEVEEGDLLTLL
NVYTAFEQNKTPAWCQKHFLNHKALRRATEIRTQMHKMLKRLDIPLISCNKNIQQILKCL
TAGLFPKAAYLHYTGVYRTVRGNKDLYIHPNSCLYTLQQPQWLLFCEILQTNKAYMKDLT
VIQPEILLEAAPHFFERTSIESI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaccagttttctccaaaccaggagatagcatgtggcaggaagataagcctgat
attgatgcccactcgtcaacgcaatttgtttataatgcacaccattcacttgcacttgac
atgcaacgtcaacgactacctatatttaaaaacaaagctcatattatttacttattggag
aaatatcagaccttggttttagtgggtgaaacaggctgtggtaaaagtacacaagtgcct
cagtatcttctcgaagcaggatggtgtgcagatggaaaaaagatcggcattacggagcct
agaagggtcgcagccacctctttggcgaatcgcgtggctgacgaacgcaattgcatttta
ggaaccaccgtgggttactgtatacgcttcgatgattacactgatgaaaccacaaagatt
aagtacatgacagagggtatccttttacgagaattaatgagcgacccgttattaacaagt
tactcggtcattatcttagacgaagtgcacgagagaacgctcttgactgacatcataatg
ggactgctgaaaaaaataatcaggaaacggaagagtttgagaattatcgtttcttcggcg
acagttgacgcggaggaacttcgtgatttctttaacataaatacgacgaaagactcgagc
aaagatagtgctgttatcatgagcgtcgaggggcggttgtatccagtagaagtatttttt
ttgaaagagccagtggcaaattacattaacggcgtggtagacaccactctaaaaatacat
gaaacagaagagccaggcgatatcttagcgtttctcacgggtcttgatgaggttgatcag
gtcgtttctcttttatcggaacacgcaaagctcataaaagacggcaaacagaaactgttt
ccgttgccgatgtacggatcgcttccgaacgcggaacaactgaaagtattttggagagct
gccaaagacactcgcaaagttatcgtagcgaccaacattgcggaaacgtctattactatt
ccaaatattgtttatgtaatcgattgcggtttcgtcaagataccttggttcgaggcggaa
acgcaaaccaacaatctcgttatcgtaccggtatcaagagcttccgcggaccaacgagct
ggccgtgcaggccgcgttcgtacaggaaaagcatatagattgtacacagaagaggcatac
gcaggattgttcgaggcaactccacctgaaatgcaacgatcagatttggcgccggcgata
ctgcaactaaaagcactgggcatcgacaatgtattgcgatttaattttccatccgcacct
cctagcaagaatctagtcacgggattagaattgctttatgcgttaggcgcgatcgatagc
aatggggatttgacgatgcctttaggcttgacaatggcagaaatgcctctggagccggtg
ctggcaaaatccttaattgtttctggtgaaatgggatgttccgaagaaatcacgatgata
tttgccatgttgcaagttcaaaatgtttttatacaacctggtggaggacaggcggctcta
aaagcgagaatagcgcatcgcaagttcgaagtggaagaaggcgatcttcttaccttgctg
aacgtttacacggctttcgagcagaataaaacacccgcctggtgtcagaaacattttctc
aaccataaagctctgcgaagagccacggaaattcgcacacagatgcacaaaatgctgaaa
cgcttggatattccactgatatcctgcaacaagaatattcaacaaattttgaagtgtttg
acagctggtctcttccctaaagcggcatatttgcattatacaggcgtgtacagaacggtt
cgaggtaacaaggatttgtacattcatccgaatagctgcttatatactctacaacaacca
caatggttactattttgcgaaattttgcaaactaataaagcatatatgaaggatttaact
gttattcagccagaaattttgctagaagcagcaccacatttttttgagaggacgtctatt
gaatctatttaa
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