Linepithema humile (Argentine ant): 105670965
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Entry
105670965 CDS
T04898
Symbol
SoxN
Name
(RefSeq) transcription factor Sox-2 isoform X2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105670965 (SoxN)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105670965 (SoxN)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
DDHD
Motif
Other DBs
NCBI-GeneID:
105670965
NCBI-ProteinID:
XP_012220164
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Position
1:35071033..35349559
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AA seq
510 aa
AA seq
DB search
MLTMETDMKGGSLHGQMPPHPHQGVSPMGHHTGMSYGLGTPIVHSAVPTLTGSPPSTAGL
GISLQHHHQTTQHHYASMQAAAVAAAAQQQQSMHAMAGQQSAQQQQQHHPHQQQQQQQSQ
SQQHHQANNHSNPNNPNPSNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENPKMHNS
EISKRLGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGG
GVAGVGGMLGVDQRQVGSGAGPQQSQLPRDVYQMPNGYMPNGYAMMHDPTYQQHVAYSGH
MGGAAASSAYPRYDPMGHHMSGGSPNPINSYINGYGGYGSTTVPGGSPSPYHQAQPGSQM
SSHSPSGSSIKSEPTSPASGGIHTPTPTGGAASTGAAGATVQTVKREYGNMGQPQTGQQT
GDIRHMMSLYLPQGVDQGVVQHDAGVYSPGPSPNSLAQHHSAIQPLTHMSDSDRKMLNPE
TGCYSESIRAWYYQRREAAYDASLSCFTGS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacatgaagggcggcagcctgcacggtcagatgccaccgcat
ccacatcagggcgtatcaccgatgggccatcataccggaatgtcgtacggcctgggaact
ccgatagttcatagcgcagtcccgacgctgacgggaagtccgcctagcacggccggtctt
ggtatcagtcttcagcatcatcatcagacaacgcagcatcactatgcctccatgcaagcg
gccgccgtcgcagcggctgctcaacaacagcaaagcatgcacgcaatggccggacagcag
agtgctcaacagcaacaacaacaccatcctcatcaacagcagcagcaacaacaatcgcaa
tcacagcagcatcatcaggcgaataaccatagcaatcctaataatccgaaccctagcaac
tcctcgaacgccaagaacaacaacatggatcgtgttaagaggccgatgaacgctttcatg
gtatggtcgcgtggacagcgtcgcaagatggcccaggaaaaccccaagatgcacaattcg
gaaatctcgaagcgcctgggcgccgaatggaaacttcttagcgaagcggaaaagcgtccg
ttcatcgacgaggcgaaacggctgcgcgccgtgcacatgaaagagcatccggattacaaa
tatcggccgcggcgtaagacaaagacgttgctgaagaaggacaaattcccgcttggcggc
ggcgtcgccggcgtcggtggcatgctcggcgtcgatcagcgacaagtcggcagcggcgcc
gggccgcagcaatcgcaattaccgcgcgatgtctatcagatgcccaacggctacatgccg
aacggatacgcgatgatgcacgatcctacgtatcagcagcacgtcgcgtacagcggtcac
atgggtggtgccgccgcttcgtccgcttatcccaggtacgacccgatgggccatcacatg
agcggcggcagtccgaatcctatcaatagctacataaatggatacggcggatacggcagt
accaccgtgcccggcggatcgccatcgccgtatcaccaggctcagccgggctcccagatg
tccagtcacagccccagcggcagcagcataaaatcagagccgacgagtccggccagcggc
ggcatacacacgccaacgccgacgggcggagcggcgtcgacgggcgcggccggtgctacc
gtccagaccgtcaagagagaatatgggaacatgggacagccgcagacgggccagcagacg
ggtgatatcaggcatatgatgtcactctatctgcctcagggcgtcgatcaaggggtcgtg
caacacgacgcgggtgtctactcgccgggaccatcgccgaactccctggcgcagcatcac
tcagccatacagccactcacacacatgtcagatagcgatcgtaaaatgttgaatccagaa
accggctgttattctgaatctatacgagcatggtattatcagcgacgagaagcagcatac
gacgcgtccctgagttgtttcacgggatcgtga
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