Linepithema humile (Argentine ant): 105671030
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Entry
105671030 CDS
T04898
Symbol
Ge-1
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105671030 (Ge-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105671030 (Ge-1)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105671030 (Ge-1)
mRNA degradation factors
5'-3' decay
Decapping complex
105671030 (Ge-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Syntaxin
Motif
Other DBs
NCBI-GeneID:
105671030
NCBI-ProteinID:
XP_012220288
LinkDB
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Position
5:complement(26251101..26258284)
Genome browser
AA seq
1083 aa
AA seq
DB search
MPERDVAGDMIKSGEGNMRHIDYQQTVQFNGQEDQHSVELCSTDVTIVPSPGDHDHGSSK
VKLKNIVDFQWDHHLYTGQLLAVHVSGKYLAYGIKVGAGGGVVRVVYKELEHRALLRGMR
GAIQDLAFAHVSNAILACVDYTGSLFIHTIEPTPSELLCSLVLQVDAEDVSPTSHRVIWC
PYIPEDDISDGDEVSKLLVLTRGSKVELWSVAVVAARFRSIEATNSDVKESGGMMEIDQH
SGTIIEAMLSPDGTALATASTDGEVKFFQVFMHSNSHGQPQPRCLHQWRPHNGRPISCLF
FLDDHKNYQPEVQFWRFAVTGCDNNSELKVWSCELWTCLQTIKFAPNPSTGKMPVLKAGL
DLSAGYLFLSDIYNKVLYILSLSKDKGEAVACVSTVSEFLLPYPILSFGIVEADQRKIRT
TGESLEDLCEEIEENDEHLVISMYLVQPKSLQECNIAFKPASQASNCRINTHDSLDYPED
LPDTVNHNGVSGENCEEDRSLSGTIETTINHNTGGLNLMTPDAFSSPAKKENNELDSNPG
SPELEKVLSGSPSLAQAVQALNASDPQKELEENDMEEQAPASCGSSPSREVREILSLTKP
DEETEIDSKPEMKTNEDWSNIPMVLFKDVQAMQESEEFAEDDETNVERQNTNDEPKTASL
SGNDAGASWRANDLNNIEMNNNLKSILEITQDQYQELKELRAEIARLRQESPATTRLEST
LARMSQQQNATLEQTLYNQMARQREFLNTFETVVKDKIENTLPRTIEETVKPLKQQMRLD
ANQMDELFQKNVTELISSAHVKDALALTAANAAKPALDAAFKEAFTTVLLPGMEKMYQVM
FKQLQDTFIKGTREYLQHIDAVVDKQLKRRNEQLSEALSALVREELQTELNRVSTTIQDN
CIRAVRDSIRENLNQQLTEISSARSRATTPAIPVTAVADAQARVMSLLQRGQFNAAFQQA
LSASDLGLVVLVCEKTEPARVFSCAGAQGQGTRCILQQPVILSLVQQLSADLGHRTELKH
RWLEEAILNLDPNDPVTREHMGTVLVTLQTQLATFVTSNPNHRSARRMKMLAMAARALLN
QHP
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagagagacgtggctggcgacatgatcaagtccggggagggcaatatgaggcac
attgactatcaacagacagtgcagttcaatggacaagaagatcagcattctgtagaatta
tgtagcactgatgtgactattgtaccttctcctggtgatcatgatcacggtagttcaaaa
gtaaaattaaaaaatattgttgattttcaatgggatcatcacctttacactggtcaactg
ttggcggttcatgtatctggaaaatatttagcctatggtataaaagttggtgccggtggt
ggggttgttcgtgttgtatacaaggaattagaacatagagctctgttgcgaggaatgcgt
ggtgctattcaagatcttgcattcgctcacgtttcaaatgcaattctagcatgtgtcgat
tataccggatccctttttatacatacaatcgagccaacgccatccgaattattatgtagt
ttagtattacaagtagacgccgaggatgtttccccgactagtcaccgagtcatttggtgc
ccgtacatcccggaggatgatatctcagatggagatgaagtatcaaaactattagtttta
actcgtggttctaaggttgaattgtggtcagtcgcagtagtagcagcaagatttcgatcg
atagaagcaacaaactcagatgttaaagaaagtgggggtatgatggaaattgatcagcac
tctggaacaattatcgaggcgatgcttagtccagatggaactgcattagctactgctagt
acagatggagaagtaaagttcttccaggtcttcatgcatagcaattctcatgggcaaccg
caaccgcgttgtttacatcaatggaggcctcacaatggaagacctatctcatgcctattt
ttccttgatgatcacaaaaactatcaacccgaggttcagttttggaggttcgctgtgacc
ggctgtgacaataattcggaactgaaagtatggtcgtgcgaactgtggacttgtttgcaa
acaatcaagttcgccccgaatccttccacgggcaagatgccagtattgaaagcgggttta
gatcttagtgctggatatctattcttatccgacatatacaataaagttttatatatactg
agtctttcaaaggacaaaggtgaagcggtagcatgcgtgagtacggtgtcggagtttctc
ttaccatatccaattttgagtttcggaattgttgaagccgaccaacgtaaaatacgaacg
accggtgaatctctagaagatctgtgcgaagaaatcgaagagaatgacgaacatcttgtc
atctccatgtatctagtccaaccgaagtcgttgcaagaatgtaacattgccttcaaacct
gcttcacaagcgagcaactgtcgtatcaacactcacgattcgctggattatcccgaggac
ttaccagacactgtcaatcacaatggcgtttccggcgaaaattgcgaagaagatcgttcc
ttatctggcacaattgaaacgacgattaatcataataccggtggcttaaacctgatgacg
cctgacgcgttcagttcgcccgcgaaaaaggaaaacaacgaattagactctaatcccgga
agcccggagctggagaaggtgttatccggcagtccatctctcgcgcaagcagtgcaagct
cttaacgcgtccgatccgcagaaagaactcgaggaaaacgatatggaagaacaggcccct
gctagctgcggtagcagtccatccagagaagtaagagaaatcttatcccttactaagcca
gatgaagaaactgaaatcgacagcaagccggaaatgaaaacgaacgaagattggtctaat
attcctatggttttattcaaagacgtgcaagcgatgcaagaatcggaggagttcgccgaa
gacgatgagaccaatgtagaaaggcagaacacgaacgacgaaccgaagacggcgtccctt
tcgggcaatgacgctggagcgtcttggcgagcaaacgacctcaacaatatcgagatgaac
aacaatttgaaatctattttagagatcactcaagaccagtatcaagagctgaaagagttg
cgcgcggagatcgctagattgcggcaggaatcgccagcaaccacgcgattagagtccacg
ctcgcgagaatgtctcagcagcaaaacgcgactctggagcaaactttgtacaatcaaatg
gctcgtcagcgtgaattcctaaacacatttgagaccgtggtgaaagataagatcgaaaac
accttgccgcgcacaatcgaagagacggtgaaacctttaaaacagcaaatgagattagac
gcgaatcaaatggacgagctcttccagaagaatgtaactgaattgataagcagtgcgcac
gtgaaggacgctttagctttgacggctgcaaatgcggctaaaccagccctggatgctgcc
tttaaagaagcgttcacaactgtcctcctgcctggcatggaaaagatgtaccaagttatg
ttcaagcaattgcaggatacctttattaagggtactcgcgaatacttgcagcacatcgac
gccgtcgtcgataagcagctgaagcgtcgcaatgaacagctaagtgaagcgctgtcagca
ttagtgcgtgaagaattacagactgaattgaacagagtttcaacaacaatacaggataat
tgcattcgtgcggttcgcgattccatacgggaaaatctgaaccagcaacttacagagatt
tctagcgcacgatcaagagcgacgacacctgctatacccgtaaccgccgtagctgatgct
caagctcgtgtcatgtcccttcttcaaagaggtcaattcaatgccgcttttcaacaggct
ctgagcgcgagcgatttaggattggtagtactagtgtgtgagaaaacagagcctgcgaga
gtattttcgtgtgcaggagctcagggtcaaggtactagatgcatcttgcagcaacccgtg
attctttcactcgtacagcagctatccgctgatttagggcatcggactgaactgaaacac
aggtggctggaagaagcaatactaaatttggatccaaacgatcctgtgacacgagaacat
atgggcaccgtattagtgaccctgcaaactcaattagctacatttgtaacaagcaatccg
aatcatcgatcggcgcgccgcatgaaaatgctcgctatggctgcacgtgcattgttaaat
cagcatccttga
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