KEGG   Linepithema humile (Argentine ant): 105671255
Entry
105671255         CDS       T04898                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105671255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lhu03041]
    105671255
Spliceosome [BR:lhu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105671255
 Complex C
   U5 SnRNP specific factors
    105671255
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 eIF2A Beta-prop_DCAF4 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N MIOS_WD40 WD_LRWD1 Phage_min_tail
Other DBs
NCBI-GeneID: 105671255
NCBI-ProteinID: XP_012220657
LinkDB
Position
6:complement(29148247..29149974)
AA seq 349 aa
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMAMIMLLEGHQGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENIGVMTGHSGAVMELHFSPDGNYLYTAST
DMTLGLWDIVAGIRIKKLKGHTAFVNSVSGARRGPTLLCSGSDDSTIRIWDPRKRRPCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAVLYKLKGHTDTITGLSLSPDGSY
ILSNAMDNTLKIWDVRPFAPYERCVKILSGHQHNFEKNLLRCAWSPDGSKVSAGSSDRYH
YIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIEA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgccgatcctggataaaagaaagggggatgatatattggcattggttcccgcttcaaag
agaaccaagaatgaagttgttttcagtagcagagagaaggcggttgtgcaaagcggccca
ccgcgaacttcctctctaatggcgatgataatgttgctcgagggacaccaaggagatatt
ttttctctggagttccatccggaggggcagtatctcgcatccacaggattcgaccgacaa
atctttatctggaatgtttacggagaatgtgagaacattggtgtcatgactggacatagc
ggtgctgtgatggaattacactttagcccagatggcaattacttgtatacagctagtaca
gacatgacgctgggtttgtgggacatagtagcaggaataagaattaagaaattgaaggga
catactgcatttgtaaattctgtatcgggtgcgcgaagaggacctacactgctttgctca
ggtagcgacgatagtacaatacgtatttgggatcccagaaagcgacgtccatgttacaca
ttgaataatacatatcaggtaactgcggtgacgttcaatgatacagctgaacaagtgatt
agtggtggtattgacaatgatattaaagtatgggacctccgaaaaaatgcggtgctttac
aaattgaaaggacacacggataccattaccggactaagtctcagccctgatggatcgtac
attctttccaatgctatggataacacattaaagatatgggatgtaaggccatttgcgcct
tatgaacgctgtgtgaaaatattgtctgggcatcaacataactttgaaaagaatcttttg
agatgtgcatggtcaccagacggtagtaaggtatctgcaggatcctccgacagatatcac
tatatctgggataccacaagtcgtagaatattatacaaattgccaggacacaatgggtct
gtaaacgacattgattttcatccgaaggagcctatagtatgttctggatctagcgacaag
caaatctacttgggtgaaattgaggcttaa

DBGET integrated database retrieval system