Linepithema humile (Argentine ant): 105671319
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Entry
105671319 CDS
T04898
Symbol
cno
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105671319 (cno)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
Yop-YscD_cpl
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
105671319
NCBI-ProteinID:
XP_012220766
LinkDB
All DBs
Position
6:28101538..28137090
Genome browser
AA seq
2175 aa
AA seq
DB search
MREMRKKHFLKVEKMTVPEMATELANKKAEREALRGVIQQWNANRLDLFELSEPNEDLEF
HGVMRFYFQDSGQKVATKCIRVASDATSQAVIETLIEKFRPDMRMLSIPEYALYEIHENG
EERKLGLEEKPLLVQLNWHIDDREGRFLLRRIDDKTNAQGVGLISDGSSFRRKLSKREKK
QIKKQEKLSRLKSLEQDENAAPGDQNGVAEKLYTELPETSFTRSISNPEAVMRRRRQQKL
ERKLQQFRSKDGGPDTGGTLKIYGEALCKDVPYKTLLLSVRDSAAQVVREMLSKYGLDKV
DSQLYCLVQVNSENMGSNVHQEYILDDDECPLAILMNHPSTRGSIMFHVRRRPADYMPRK
RKKKPAGKWNELDHRYEDERLPFLLELNSDGSDIPNGAGVRHRLQPNVTEVGSERPIGPQ
AVQAQTLTLPGPTVMPRHCVIAFTENIVTLTPCSRDAHTYVNNQRIHQTTILQNGAIVKF
GRMYTFRFIDPAPEERIRQRHDSNKQIDYAYDRRSPDATSQDVSSEKFHPGSATSNGSGG
QTPGQTQERAAPSSPSKSAAVAARSPRSPTHPPESTHNYETTFDLDGNVETASLSSSRDG
NRLSQYDRQAWGADPILPAVLEFLEETEEAFLHAVITDVEPSAPQFKLAPTYTLYLSARY
RASTHYRPELQPTERAHRLTLMLANVATMIQRVIQERYMNASSLAFWLANGSELLHMLKS
DRHVGAFSTRAQDILVDAVHTAFGSLVRCVTLELTPAMTQFMADADEPAKEAGVLQIFSN
TMTLLRRCRVNAALTIQLFSHLFHAINATAFNTLVSNGNLCVRWFGRRLKARLNALETWA
ERQGLELASQCHLATIMQATHLLQAPKYNAEELATLSSTCFKLNSLQVRALLQKYQPATD
EPRLPAELIENVVRVAESVADTLARADGREIRLEEEPVLGLALLLPEDGYSCEVIRGVPP
GLAEFLAPLQRDGLCRMAAQPTSSGYWTIYMIDHHNNMRSPSAMSNRSGGYVGHINQNQA
QPEIQVIKLHKSTNGMGLSIVAAKGAGQDRLGIYIKSVVAGGAADADGRLTAGDQLLKVD
GQSLVGITQEKAAEYLVRTGPIVTLEVAKQGAIYHGLATLLSQPSPVMTRAYKTRPKSEL
LEPAVGAAEATGGQPAASRSMGDLLSFPKRATSQSLAQPGPRRMSERDLSSRLGYDATPQ
QIHSSKSVPALHNMGTEVKQQHEVFNPGYSRASSSNSVTPPVQPPPMATINSATALRSRS
SHNLHDPMRAGALPPTGLVSRQQSSPNLNPNVTHANVPLNAQNTEVERFYQNLSIYRNQE
AALKQQLSPQQSDDRNLQHNQNQKNTLRGSQNSLNRPSTLEATNYIRDRPTSAYVTQGQQ
QSYSAVGSQMQQQNVGPSSRSQSTRDIIRQEAKMQEMQEEVRRRELRGGAPMLGQHRPPM
YNVGARGVAPATQQAPPNALSVALPKPSLGSTSNLGVASGYAARQNAPGYNYTDIQHVQH
NNAQYNQYGQYNQYPNRYPVSGGQYGSMLLKPKNEAVIRGHQSMPHESPLGKDQHNQQEA
KASAEQSRHFAGSQNSPHYPNGSLEQRVDQYTNDGMINRAQNGESNPAATSEVPPTRPTL
PSEEFNESPPPPPPDTSTHPLYNKQADMRYMASMQDPPRGSYYPAGGISAMQQPRQYQYS
ATNPWQREEREKEQARRREAARQWRDQQIAELSALTHRTQQQEEQLRALQLERDFQKRAE
EAANQDDDEESNDLDNESTQRIQDLFRMAASQERTIQGTQQPPILSRTNVGNQSIRGGLS
LQLVGNQPVISGHTHILSGQAATQNVGASGADQEGGDLHVQSSHQQQQQQQQQQRMPANQ
SEEQMHMPTNYGTPLGSHFSSGQKSYSMGMLHSIEDKELQRKMDETKRKQADLEESQKKQ
EEHQLHSQQQAYQQSQHARSQQSLHPSMLRLDNLIINGSNVPMPLQHNINDAPPPPERGS
SYAVMSQQNALRSNSSIASNLPPASQQPPSLKRVSFHDSNANSEPTLRNVSSATPNPPSF
SMNTIREDPNNFINDAENLLASPKTPEGSGTSFSGATPGVIGAQEVYKDPRQKRLAEKQK
QQNLQIGAVPEKLSFKEKMKMFAMETGEDGTPRDKVKISRAQREIDNISSPLNSNNNNNN
INNISGNNNTNSNRT
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaatgcgaaaaaagcattttctcaaggttgaaaaaatgaccgtacctgagatg
gcaacggaattggcgaacaagaaagcagagcgagaagctctcagaggagtcatacaacag
tggaatgccaatcgtttagatttgttcgaactttcggagcctaacgaagatctggagttt
catggggtaatgagattttactttcaagacagcggccagaaggttgctaccaaatgcatc
agggttgcttcggatgcgaccagtcaggcggtaatagaaacgctcattgaaaaatttcgt
cctgatatgagaatgttatctattcctgaatacgctctttatgaaattcatgagaatgga
gaagagcgtaaacttggcttagaagagaaacctttgctcgtacaattaaattggcatata
gacgaccgtgagggacgcttcttattgagaagaattgatgataaaactaatgcgcagggt
gtcggccttatttcggacggttctagcttccgaagaaagctgagcaagcgggaaaagaag
cagatcaaaaaacaagaaaagctcagtcgactgaagagcttggagcaggatgagaatgct
gcacctggcgatcagaacggcgtcgctgagaagctctacacggagctacctgaaaccagt
ttcacgagaagcatctcgaatccagaagcggtgatgaggcgccgtcgtcaacagaaacta
gagaggaagctccagcaatttcgcagcaaagacggcggccccgacacgggtggcacgttg
aaaatttatggcgaggcgttgtgcaaggatgtgccatacaaaacgctgttgctcagtgta
cgagattccgccgctcaggttgtgcgagagatgctttctaagtacggcctagataaagtg
gattcacaattatattgtcttgtgcaggttaatagtgagaatatgggcagcaacgtgcat
caggaatatatattggacgacgacgagtgtcccttggcgatattaatgaaccatccttct
acgcgaggttccattatgtttcacgtgagaaggaggcccgcggattacatgccgcgaaaa
cggaaaaagaaacccgccggcaagtggaacgaattggatcacagatacgaggatgagaga
ttgccattcttgctggagcttaattccgacggcagcgatatcccaaacggcgccggagtg
cgacaccggttgcagccgaacgtgacggaagtgggatcggaaagacccataggaccgcaa
gcggtgcaagcacaaacgctgacgctgccgggaccgacagtgatgcccaggcattgcgtc
atagccttcaccgagaacatcgtcactctcacgccatgttccagagatgcgcatacatac
gtgaataaccaaaggatacatcagaccaccatactgcagaatggagctatcgtcaaattt
ggtaggatgtacacatttcgatttatcgatccggcaccggaggagcgcatcagacagaga
cacgactctaacaagcagatagactatgcttatgatcgacgctcaccggatgctaccagt
caggatgttagctcggagaaatttcacccgggatcggcaacgtcgaatggcagcggcggt
cagacaccaggtcagactcaggaacgagcggccccgtcgagcccttccaagtccgccgct
gtcgcagcccgtagtcctcgtagtcccacgcaccctccagagtccacgcacaattacgag
accacgtttgatctggacgggaacgtggagaccgccagtctgagcagcagcagagacggc
aacagactctcacagtacgatcggcaggcgtggggcgcagatccgatcctgccggccgtc
ctggagttcctcgaagagaccgaggaagcgttccttcatgccgtcatcacagacgtggag
ccctcggcgccgcagttcaagctggcgccgacttacactctttatctgagcgcgagatat
cgcgccagcactcattacaggccggaattgcagcccacggagagggcgcatcggctcacc
ctcatgctggcgaatgtcgccaccatgattcagcgcgttatccaggaacgctacatgaat
gcttcgtcgttggcattttggttggcgaacggctcggagctgctgcacatgttgaagagc
gatcgtcacgtgggcgcgttttccacgcgcgcgcaggacatcctggtggacgcagtgcac
acggcattcggctcgctcgtgcgttgcgtcactctggaactgacgccggcgatgacgcag
ttcatggcagacgcggatgagccagcgaaggaagccggggtgctgcaaatcttctcgaac
acgatgacgctgctgcgacggtgccgcgtgaacgccgcgctgacgatacagctgttcagc
catctgttccacgcgatcaacgccacggctttcaacaccctcgtttccaacggaaacttg
tgcgtcagatggttcgggcgcaggcttaaagcgaggctgaacgctctggaaacctgggcc
gagaggcagggcttggagctcgccagtcaatgccacttggcgacgattatgcaagcgact
cacctgctacaagcacccaagtacaatgccgaggagctggccacgctaagctcaacttgt
tttaaattgaactcgctgcaggtgagggcgttgctgcaaaaatatcagccggccacggac
gagcccaggctacccgccgagctgatcgagaacgtagtgagagtggcggaaagtgttgcg
gacacgctcgcgcgtgcggacggtcgcgaaataagactggaagaggagcctgttctcgga
ttagcgttgctgctgcccgaggatggctacagctgcgaagtgataagaggcgttccaccg
ggattggccgagttcctcgcgcctctgcaacgagacggtttgtgtcgaatggcagcccag
cctactagcagcggctactggactatttacatgatagaccaccacaacaatatgcgtagt
cccagcgcgatgagcaacagatcgggtggctacgttggccatattaatcaaaatcaagct
cagccagagatacaagttattaagttgcataaaagtaccaacggcatgggtttaagcatc
gttgcggcgaagggcgcagggcaggatcgactgggtatctatattaaaagcgttgttgct
ggcggtgccgctgatgctgatggtagattaacggcgggcgatcagttgctcaaagtcgac
ggacaaagtctggttggaatcacacaagaaaaggctgcagaatatctcgtacgtacgggt
ccgattgtaacgttggaagtggcgaagcaaggcgctatatatcacggactcgcgacgtta
ttatctcaaccttctcctgtgatgacgagagcatataaaactcggccgaagtccgagctg
ttagaaccggcggtaggagcagcagaagcgaccggcggtcagccagccgcatcgcgctcg
atgggtgacctgttgtccttcccgaaacgggcgacgtctcagagcttagctcaaccaggt
cctcgtcgcatgagcgagcgggatctatcatcacgacttggatacgacgccactcctcag
caaatccacagcagcaagtctgtgccggcgttgcataatatgggtaccgaggtaaagcag
cagcacgaggtgttcaatccgggatacagcagagcctcgtccagcaacagcgtcactccg
cccgttcaaccgcctccgatggcgacgatcaacagcgcaactgccttgcgttccaggtcg
agccacaatttgcacgatcctatgagagcgggtgctctaccgcctaccggcttggtcagc
aggcagcagtcgtcgcccaatttaaatccgaacgtgacacacgcgaatgtgccgttgaac
gcgcaaaacacggaagtggagagattttatcagaatctaagtatttatcggaatcaagag
gcggcgctgaagcaacaactcagtccacaacaatcggacgataggaacctgcagcacaat
cagaatcagaagaatactctgaggggttcgcaaaactcgttgaaccgaccgtccaccttg
gaagccaccaactacattcgcgaccgaccgacgtccgcgtacgtcacgcagggccagcag
caaagttactccgcagttggcagtcagatgcagcagcagaacgtgggaccgtcgtcgcgc
tcgcagtccacgcgcgacataattcgccaggaggcgaaaatgcaggaaatgcaagaggag
gtgcgtcgacgggagctgcgcggcggcgcgccgatgctcggtcagcacaggccgccgatg
tacaacgttggcgcgcgaggggtggcacccgcgacccagcaggcgccgccgaacgctctg
agcgtcgccttgccgaaaccgtcgctcggctccacgtcgaacctgggcgtggcttccggc
tacgctgcgagacagaacgcgcctggctacaattacacggacatccagcacgtgcagcac
aacaacgcgcagtacaatcagtacggccagtacaatcagtatccgaatcggtatccggta
agcggcggccagtacggctcgatgctgctgaagccgaagaacgaggcggtgattcgcggc
caccagtcgatgccccatgagagtccactcggcaaagatcagcacaaccagcaggaggcg
aaggcgagcgcggaacagagtcgacatttcgccggctcgcagaacagtccgcactatccg
aacggcagcctggagcagcgtgtcgatcagtacacgaacgacggcatgatcaatcgagcg
cagaacggagagagcaatcccgcggcgacgtcggaggtgccgccgacgaggccgaccttg
ccgtccgaggaattcaacgaaagcccgccgccgccgccgccggacacctccacgcatcct
ttgtacaacaagcaagccgatatgaggtatatggcgagcatgcaagatccaccacggggt
agttattatcccgcgggaggaatcagcgccatgcaacaaccacgtcaatatcagtacagc
gcgacgaatccttggcagcgagaagaaagggaaaaggagcaagctcgtaggagagaagcc
gcccgacaatggcgtgatcaacagatcgctgagctaagcgcgctgacgcatcgaacgcag
cagcaagaggagcagctgcgagcgcttcagctggagagggatttccagaaacgagcggaa
gaggccgccaatcaagatgacgatgaggaaagtaacgacttggataacgaaagcacgcag
cgtatacaagatttattcaggatggcggccagtcaagagagaacgatccaaggaactcag
cagccgccgatcttgtccagaacgaacgtgggaaaccagtctattcgaggcggcttgtct
ctgcagcttgtcggcaatcagcccgttatcagtggccatactcacattttatccggtcaa
gccgcgactcagaatgttggagcgagcggtgccgatcaggaaggcggtgatttgcacgtg
caatcgagtcaccagcagcagcagcagcagcagcagcagcagcgaatgccggcaaatcag
agcgaagagcagatgcacatgccaaccaattacggcacgcctcttggcagccacttcagc
tccggtcagaagtcctattctatgggcatgctgcattccatagaggacaaggaactgcag
cggaaaatggacgagactaagcggaagcaagccgatcttgaggagagtcagaagaagcag
gaggaacaccagctgcactcgcagcagcaagcgtaccaacagagccaacacgcgagaagc
cagcagtcgctgcatcccagcatgctgcgactggacaacctgatcatcaacggatccaat
gtacctatgcccttgcaacataatataaacgacgcacctccgccaccagaacgaggctcc
agttacgccgttatgtctcagcaaaacgcccttaggtcaaacagttcgatcgcgtctaat
ctacctcccgcttcccaacagccaccgtcattgaaaagggtctcttttcacgattcaaat
gcaaatagcgagcctacgctgcgcaatgtatcgtcggcgacgccaaacccaccttcgttc
tcgatgaacaccatcagagaggatcccaataattttatcaacgacgcagagaatctatta
gcatccccgaaaacaccggaaggatccggaacttcgtttagcggcgccactcccggagtg
atcggggctcaagaagtgtacaaggatccaaggcaaaaacgattggcggagaaacagaag
cagcaaaatttacaaatcggcgcggtgccagagaaactcagcttcaaggagaagatgaag
atgtttgcgatggaaaccggcgaggacggcacgccgcgggacaaggtaaagatttcacgc
gctcagcgcgagatcgacaacattagcagcccgctcaattctaacaataacaacaataat
atcaacaatatcagcggcaataataacaccaatagtaatagaacttga
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integrated database retrieval system
