Linepithema humile (Argentine ant): 105671333
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Entry
105671333 CDS
T04898
Symbol
Prp5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105671333 (Prp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105671333 (Prp5)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105671333 (Prp5)
Spliceosome [BR:
lhu03041
]
Complex A
U2 snRNP components
U2 related factors
105671333 (Prp5)
Complex B
105671333 (Prp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
105671333
NCBI-ProteinID:
XP_012220819
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All DBs
Position
6:26737754..26741701
Genome browser
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSAEPEKKRRRSRSRDRERDRDKGRHRERRSRSRDRDRD
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDSEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNSKEAKEEGVKEEVEEIKEEVKNEEEIDPLDAFMAEVQEEVRKVNK
FDSKAPKSANNGTNSGAQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVINYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPTATSITVPGQP
VPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaggacaggcatcatcgacgaaggtcaagatcgagatctaga
tcccgatcggccgaacctgaaaagaaacgacgacgatcgagaagcagagatcgtgaaagg
gaccgagacaagggtcgacatagagaacgaagaagtcgttcacgagacagagatagagac
aggagcgacagaagggagcgttctgaaagggacagagaccgggaaagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaagtcttcgcgctccggcaaagaacgatcaaac
aggtctcggtcacgcgatagaaaagataaagagaaaggcgacagtgaagagttgcctttt
gatcatacaaagttagataaggaagaagagcaaaagagactagaattggaaatgcaaaaa
agaagggagaggatagaaagatggcgagcagagaggaagaagaaagaactggaagcaaca
aaaaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcc
cttgaggatgatagtgatgaagagactcctgtggtacagaataacagcaaggaggcaaaa
gaagaaggtgtaaaagaagaagttgaagaaataaaggaagaagtaaaaaatgaagaagaa
attgatccacttgatgcttttatggcagaggttcaagaagaagtaaggaaagtgaataaa
tttgacagcaaagctccgaaaagtgccaataatggcactaattctggagcacaaagtggt
ggcgtagtcattgtgactggtgtggctaagaaaaaagttcagaaacaaaaaggagaattg
attgagcaaaatcaagacggcttggagtattccagcgaagaagagggcgaaaatcttcat
gaaactgcggctggtatagcgaacaagcagaagcgagaattggccaaagttgatcacgct
acaacagattatcaaccattccgaaaatctttctatgttgaagttcccgaaattgcaagg
atgacgccagaagaagtagaggcgtacaaagaagaattggaaggtattcgtgtgaaaggc
aaaggatgtccaaaacctataaaatcttgggcacaatgcggtgtgactaaaaaagaatta
gaagtattgaaaaaacttggttatgagaaaccaacgcctattcaatgccaggcgattccg
gcgatcatgtctggtcgtgatcttataggtatcgcaaaaactggaagcggaaaaacgtta
gcttttttgttaccaatgtttcgtcatatactcgatcagccaccgctagctgatggagac
ggaccaattgcactgatcatgacaccgactagagaattgtgcatgcaaatcggtagggat
tcgaagaaattcacgaagtcactgggtctttcccatgtgtgtgtttacggtggaaccgga
atttccgaacagatagcagaacttaaaagaggagccgagattatcgtgtgcacaccagga
agaatgatcgatatgctcgccgctaacagcggacgagtgaccaatttacgtcgagtgacg
tatgtggtgctcgacgaagccgataggatgtttgacatgggttttgagccgcaagtgatg
cgtattatggagaacgtaagaccggaccgacagacggtgctgttcagcgcgacatttcct
cgacagatggaggcgttagccaggagaatactcaccagaccggtcgaagtgcaggtcggc
ggacgttctgttgtttgtaaggacgtcgagcaacatgttgttgtgctcgaggaagatcaa
aagttctacaaactgctcgagattcttgggcattaccaggataaaggctccaccattata
tttgtggacaaacaggaaaacgcagatacattgttaaaggatcttatgaaagcctcgtac
tcgtgcatgtctcttcatggtggtattgaccaatgcgacagagattcgaccatattggac
ttcaaagccggacgaacgaaattgctcgtggctacatctgtcgctgctagaggcttggat
gtcaaacacttggtattggtcatcaattatgattgtcctaatcattatgaggattacgta
cacagatgcggtagaactggtcgtgctggaaataaaggatatgcgtatacctttatcacg
tcagaacaggaacgttacgccggcgatattctacgtgcgcacgaattagcgggtgtaccc
gtgccggaaccgttgcgtcagttgtgggagggctacaaagctcgccaagccgcagacgga
aagaaagtccataccggaggtggtttcagcgggaaaggttttaagtttgacgaatcggaa
gccgctttggcgaacgagaaaaagaaattccagaaggcagctctaggactgcaagactct
gacgatgaggacatagagaacgatatcgaccaacagatcgagagtatgctggcgcctaag
cgaacagttcgcgagatagccaggccgaccgcaacgagtattacggtgcccgggcaacca
gtgcctagcgccactgataagttggaattggctaggagattggcgtcaaagatcaacatt
gcgaaaaatttgggcgccgaggcgaaaggcgccactcagcaagcggcggaagccatactc
aagggtgcgggacctacgaatcttattacggcaaaaacagtcgctgaacaattggcggcc
aaactgaatacaaaattgaattatcagccgcgcgaggaggatctcgtggagagcgacgca
gagacgggcgagcaaacattccgcaagtacgaggaggaacttgagatcaacgattttccg
caacaagctagatggcgggtcacgagtaaggaggctctagctcagatatcagaatactct
gaggctggtcttacagtacgtggaacatacattgcacctgggaagacaccaccggaaggc
gaaaggaagttatacctggcgatagaatcaacgagcgaattagcggtcagcaaagcgaag
gcggaagtgtcacgacttatcaaggaggagctcatcaaactgcaggcgtccggcgctcac
accgcgtcacgtggtcgctacaaagttttgtaa
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