Linepithema humile (Argentine ant): 105671385
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Entry
105671385 CDS
T04898
Name
(RefSeq) pre-mRNA-splicing factor Syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105671385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105671385
Spliceosome [BR:
lhu03041
]
Complex B
Other components
Prp19-related factors
105671385
Complex C
105671385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Ribosomal_S30AE
Co_AT_N
Motif
Other DBs
NCBI-GeneID:
105671385
NCBI-ProteinID:
XP_012220930
LinkDB
All DBs
Position
6:28273367..28274893
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AA seq
232 aa
AA seq
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MDDAAPSASSTQSTMSKHAERMKRLRELHAKRNEARMQNHKEVVEEDKRNKLPTNWESRK
RQAEWIIQDESARKEAEAKGEDYERKKLLSIDATEAERIAKKKRSKQNPDPGFSDYEQAA
IRSYNRLVKNIKPNMEAYEEAKEKLGPAFYGDRNTILHGLHEDKKDAIDKMVTNLEKQIA
KREKYSRRRMHNDDADIDYINERNARFNQKLERFYGEYTRETKLNLERGTAI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgccgcgccgagtgcatcgtctacgcaatccacgatgtcgaaacatgcggaa
agaatgaaacggctcagagaactccacgctaaaagaaatgaagccagaatgcagaatcac
aaggaagtcgtagaagaggacaaaagaaataaattgcctactaactgggagtcgcgtaaa
agacaagccgaatggataatacaggacgaatctgccaggaaagaggcagaagccaagggt
gaggattacgaacgaaaaaagttgttgagtattgacgccacagaagctgaaagaatagct
aagaaaaagagaagcaagcaaaatccagatccaggtttctccgattacgaacaggcggcg
atacgttcgtacaacagactggtgaagaacattaagccaaacatggaggcgtacgaggag
gcaaaggagaaacttggacctgccttttacggagaccggaacacgattttacacggtttg
catgaggataaaaaagacgcgatagacaaaatggtcaccaatctggagaaacagattgca
aagagagaaaagtacagcaggcgcagaatgcacaacgacgacgcggatatcgattacatc
aacgagcgtaacgccaggttcaatcagaagctggagagattctacggcgagtacactcgc
gagacaaagctgaacttggagagaggtacggctatataa
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