Linepithema humile (Argentine ant): 105671447
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Entry
105671447 CDS
T04898
Name
(RefSeq) serine/threonine-protein phosphatase PP1-gamma catalytic subunit B
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105671447
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lhu01009
]
105671447
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105671447
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105671447
03041 Spliceosome [BR:
lhu03041
]
105671447
Enzymes [BR:
lhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105671447
Protein phosphatases and associated proteins [BR:
lhu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
105671447
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105671447
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105671447
Spliceosome [BR:
lhu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105671447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
105671447
NCBI-ProteinID:
XP_012221066
LinkDB
All DBs
Position
4:complement(8482221..8487196)
Genome browser
AA seq
328 aa
AA seq
DB search
MAETDKLNIDNIIARLLEVRGARPGKNVQLTEVEIRGLCLKSREIFLSQPILLELEAPLK
ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDL
QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVAKFLHKHD
FDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
KRKFTYGGLNAGRPVTPPRGANNKNKKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccgacaagttgaacattgacaacattatagctcggctcttagaagtacga
ggagcgaggcctggcaaaaatgttcaattgacagaagtggagattagaggattatgtttg
aaatcacgtgagatctttctatcgcaacctattcttttggaacttgaagcacctctaaaa
atatgtggcgatattcacgggcaatactatgacttactacgattattcgaatatggtggt
tttcctcccgagagtaattatcttttcttaggagattatgtcgatagagggaaacagtca
ttagagactatctgtcttcttcttgcctacaagatcaaatatccagaaaattttttctta
ttaagaggaaatcatgaatgcgcatccatcaataggatatatggattttatgatgaatgt
aaacgtcgttacaatattaaattgtggaagacatttaccgattgcttcaattgtttgcct
gtcgccgcaatcgtggatgaaaagatattttgctgccatggaggcttgagtccggatttg
cagagtatggagcagattagacgtatcatgcgaccgacggatgtacctgatcagggatta
ctctgtgatttattgtggtctgatcctgataaggacacgatgggctggggcgaaaatgat
cgcggtgtatcgtttacattcggcgcagaagttgttgctaagtttttacacaaacatgac
ttcgatcttatatgccgtgcgcatcaggtggtagaagatggctatgaatttttcgccaaa
cgacaattggtgacgttattctcggctccgaactactgcggtgaatttgacaatgcgggt
gccatgatgtcggtggacgagactctcatgtgcagttttcaaattttaaagccggccgat
aagaggaaattcacttacggcggcttgaacgcggggcggccggtgacgccaccgcgaggc
gcaaataacaagaacaagaagaagtga
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