Linepithema humile (Argentine ant): 105671489
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Entry
105671489 CDS
T04898
Name
(RefSeq) uncharacterized protein isoform X3
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03015
mRNA surveillance pathway
lhu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105671489
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105671489
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lhu01009
]
105671489
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105671489
03036 Chromosome and associated proteins [BR:
lhu03036
]
105671489
Protein phosphatases and associated proteins [BR:
lhu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105671489
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105671489
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105671489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
105671489
NCBI-ProteinID:
XP_012221136
LinkDB
All DBs
Position
6:29610886..29630468
Genome browser
AA seq
1086 aa
AA seq
DB search
MPAIAVTLEQSSRTSSTETAEQCQSLSSLLSSSWGHRVYATRRDLFVSAIIDPYSSRAVH
HLDLNACFANELHLEQNLVDCQTIHFSYAIPINVVPIRESPKLVKLVLDQSVELNGQAVN
FLLDRHPQLHRRHLHDMAATAKHDLRQKFPADTSTSGEEDIAAIAKQISDHAEAIYQTWK
SRGLAPTEILTCHSNATAVDKFGSALTPCNLPAVGNTIAVNNIGSKMLPSLGCSSPTTVD
ILTQTPNLDNGNLEKLVNNFVVEDKARIAAFKQRSPSKPLPSSIQFALQKFERNSMQQQQ
VAGSMKNDTITTDNPKKLTNVLLSPISSFPNKPSQIVKPQITAKTPSSHHCDILLETIET
TFPADLTPSKRATQQRRPTSTLIATSPISSSLNIDSLHSTSSGLTTWPLKNKLNDTKRIT
DVSRTPVKTTQQEDAAQVLPAKDEKRSIVTKTNSRCAYLDEVAREEERLINALKTGAVIT
EEPERTAIRNRQKPAIKREKPKVESVKQIIIGSHNSHRTSSIVSSSAISSSPASASNSAV
IVSHIPLVNESKSLSKDDLSTMSAVDYAKVRYQAAQQNPPTQQRLEEQRASSHSYNSTTE
QLVSSAKTKFEMEIQKDKDIKDSDKDSVTSKWGPRITPLRPRLEQTVPHPELTNQQKQHI
RAAAAATMGNNPVRPFLTRGSVAERVLIFEKCPSELLLDKRGPRQPAINMWRSGHEVQSK
AQTYTREKTQQKNLPPHTTLQRQVKANRNVYIPRFYFPGGKPVPLSQLEMTVSKITAAFQ
SLSNCRATRVQFCTITKACDLPLYWKVPLFLAADGEQKGYVEMNAFLEFWKELTTTHHDA
ASKFVRIVTRALRSNILPEDLIPLVQDVVETHPGLTFLKEATEFHSRYVHTVIARIFYCV
NRNWSGKISVAELRRSNLLAVIAVLEHEEDINQVTAYFSYEHFYVIYCKFWELDRDHDLF
IDKMDLTRHNDHALSTRMIERIFSGAVTRGSRIKGSNNTQQPEDKMSYTEFVWFLLSEED
KNHPTAIEYWFSTCYNFSSIDAWISMAMVICRCTSWNTFMKSNYIEWKRLVWKHCLSKTA
FVRCWI
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatagcagtaacacttgaacaatcttcaagaacatcgtcgactgaaacagcg
gaacagtgtcaatctttgtcatcattgttatcttcatcctggggtcaccgggtatacgca
acccgacgtgatctctttgtgtcagcgatcatcgatccgtattccagcagagcagtgcac
catttggatttaaatgcatgcttcgcgaacgagttacatttggaacaaaatttagtagat
tgtcaaacaattcattttagttatgcaattccaattaacgtcgtaccgattcgtgagagt
cccaagctggtcaaattggtgttagatcagtccgttgagttaaacggtcaggcggtgaac
tttttactagaccgtcatccgcaactacatcgacgacatctccatgatatggctgccact
gcaaagcatgatctacgtcagaaatttcccgcggatacgtccacttccggtgaggaagat
attgccgcaattgccaagcagattagcgatcacgcagaggcgatttatcagacgtggaag
agtcgtggattagcaccgacagagatcttaacttgccacagcaacgcaacggctgttgat
aaatttggcagcgcattgacaccttgtaatttgcccgctgtcgggaataccatcgctgtg
aacaacattggtagtaagatgttaccatctcttggatgttcttctccgacaacagtagat
atactcacccaaacgccaaatttagacaatggtaatcttgaaaaactagtcaacaacttt
gtagtagaagataaagctagaatagctgctttcaagcaaagatcgccgtcaaagccatta
ccgtcttccatacaatttgccttgcagaaatttgagagaaattccatgcaacagcagcag
gtggctggttctatgaaaaacgatacaattacgaccgataatccaaaaaaattgacaaat
gttttgttatctcctatctcgtcgtttccgaacaaaccgtcgcaaatagtaaagccccaa
attaccgcgaagacgcccagctctcatcattgtgacatccttctggaaacaattgagacc
acttttccagctgatctgacaccttctaaaagagcgacacagcaaaggagacctactagt
acattaatcgcgacatcgcccatcagttcttcgttaaatatcgattcgttgcactcgacg
agttcggggctgacaacgtggccattgaaaaacaaactaaacgataccaaaagaattaca
gacgtttctcgtacaccagttaaaacaacccagcaagaggatgcggcacaagttttacca
gcaaaagatgaaaagagatcgatcgtgacaaaaacaaattcgagatgcgcgtatctggac
gaagtcgcgcgggaggaagaaagattgataaacgcgttgaaaacaggtgccgtcatcaca
gaggaacccgaaagaacggctatacgcaatagacaaaaaccggccatcaagcgcgagaaa
ccgaaagttgaatcggtcaagcaaattattattggaagccataattctcatagaactagc
tcaatagtatctagctctgcaatatccagttcgccagcgagtgcatccaatagcgccgtc
atcgtaagtcatattccgttagttaacgaatcgaagtcgctcagcaaggatgatttatcg
actatgtcagcggtggattacgctaaggttagataccaagctgctcaacagaatcctcct
acacagcagaggctcgaggaacaacgggcttccagtcattcgtacaattcaaccacagag
caattggtttctagcgcaaaaacaaaatttgaaatggagatacaaaaggataaggacatt
aaggattcagacaaggattcggtgacgtctaaatggggaccgagaatcactcctttgcgg
ccacgtctcgagcaaacagtacctcatccggaattgactaaccaacagaaacagcatata
agagcagcggccgcggcgacaatgggcaacaatcctgtgagaccatttcttaccaggggt
tctgtggcagagcgcgtacttatctttgagaaatgcccgagcgaattgctattggacaag
cgtggtccacggcaaccggccattaacatgtggagaagtggccacgaggtgcagagcaaa
gctcagacttatacgagagaaaagactcaacaaaagaatttgccgccacatacaacttta
cagagacaggtcaaagccaatagaaatgtttacataccgagattttattttcctggagga
aagccagttcctctctcacaattggaaatgaccgtctcgaagattaccgcagcctttcaa
agtttatcgaattgtcgtgctactcgcgtgcaattttgtaccatcacaaaggcttgtgac
ttgcccttatattggaaagtaccgcttttcttagcggcggacggtgaacagaaaggatac
gtcgagatgaatgctttcttggaattttggaaagaactaacaactactcatcacgatgca
gctagtaaatttgtcagaattgtcactcgagcacttcggagcaatatccttccagaggat
ttaattccactcgtacaggacgtagtggaaacgcatccaggattgacatttttaaaagaa
gctacggaattccattcccgttatgtgcacacggtgattgccaggatattttattgcgtg
aaccgaaattggagcggcaagatttcagtcgcggaattaagaaggagcaatctgctggca
gtgatcgccgtgcttgaacacgaggaagatatcaatcaagtcaccgcctactttagctat
gaacatttctatgtgatatattgcaaattctgggagttggatcgcgatcacgaccttttc
atagataaaatggatttaacaaggcacaacgatcatgcgttatcgacccgaatgatcgaa
aggatatttagcggtgctgtaacaagaggtagtaggataaagggcagtaataatacgcaa
caaccagaagataagatgagttatacggagtttgtgtggtttcttctcagcgaagaagat
aaaaatcatccaactgctattgaatattggtttagtacgtgttataatttttcgtcgata
gatgcatggatctcgatggcgatggttatttgtcgatgtacgagttggaatacttttatg
aagagcaattacatcgaatggaagcgattggtctggaaacattgcctttcgaagactgcc
tttgtcagatgttggatatga
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