Linepithema humile (Argentine ant): 105671533
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Entry
105671533 CDS
T04898
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105671533 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105671533 (Herc4)
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105671533 (Herc4)
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
HECT type E3
105671533 (Herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
105671533
NCBI-ProteinID:
XP_012221195
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Position
3:complement(20373973..20382145)
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AA seq
1073 aa
AA seq
DB search
MARSRKLSTYECDLAEKRIKLTVDKMFCWGSTIHGELGLGGIEDENIFMPREVDFSETNN
IEQIACGENYTVALTKDGKVYSCGNNDYGQLGHEKARKRLQLIPGLDAFVFKKVECGNCH
TMAVNEWGQLFSWGCNLNGQLGLNSVDCTERTPRMVRALGTNVIIQIACGVEHSIALTND
GDLFAWGSNKEGQLGLGIHTVTEIKPKKISTLAAVPIAFVACGGYHTIVISKSGAVFSWG
RNTFGQLGLNDTQQRNLPCQLRTLRNAKVCYATCGEEFSAFLTLDGGVFTCGAGMYGQLG
HGNNTNEILPRQVMELMGSTVTQIACGKRHTLALVPSRGKVYAWGLGGAGQLGNRAARSA
TTPQVVLGPWSSPSGSSMLLDLYYTSQIDCVVRHIFSGGDHCFATIGPKKDNIEPDDCRI
LGSTSKILTVTEEKIVDCQKVSSGSQVNHDLMTYLETVFKSQASINGSFLLANDAHYGCS
SKHHGVDIDDAIKLFGMISELENNTIQELIYTCITDSLIPSFAISPPDVESLRVYLTLPL
YHRFANLSHYSSLQTPFCKALLRLKAEASKVVGIWWSAAPEYYFERLVRIYKSVVLHFVK
QSTADKVVTWNESLQSALNLLRLLYKLNVSAGMRLPYETFHLSELSQYIDVNRDYLKWMS
DDQFTYHKIYFCNYPFLFDAEAKTTLLETDQAIQMQSAMHEAATRVVRDIMFGTTNSNIQ
QYRQFVILNVSRNNLVSDALTQLQQYDSSELKKPLRVKFNEEEAEDVGGVKKEFFMLLLR
EILDPKYGMFKEYEETRTIWFSSDSLEDGVMYFLIGLLCGLAIYNFIIIDLPFPLALYKK
LLREPVGLNDIKQLSPIIAKSLHSILDYQEPDFEEVFCLNFEITRDVFGEQKRFEFFPDG
SKVPVTLKNKQQYVDFYVDYILNKSVETHFQMFNKGFHKVCGGRVLELFHSHELMALLVG
NENYDWEELEKNATYKDGYSKDDPTIVFFWQVFHELPLEEKKKFLLFLTGSDRIPIQGMK
AIKITIQPMTDDRFLPAAHTCFNLLDLPRYQTRERLKYKLLQAIQQNLGFSLV
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatctaggaaactctcgacgtatgaatgtgatctagcagaaaaacggattaaa
ttaacggtcgacaaaatgttttgttggggcagtactatccatggagagctgggtctgggt
ggtatcgaagatgagaatatctttatgcctcgtgaagtggatttctcagaaactaataac
atagagcaaattgcatgtggagaaaattatactgtagctcttactaaagatggaaaagta
tattcttgtggtaataacgactatggacaacttggacacgagaaagcaaggaaaaggtta
caactgatacctggcttggacgcatttgtattcaagaaagtagagtgtggcaactgtcac
acaatggctgtgaatgagtggggacaactttttagctggggttgcaacttaaatggtcaa
ctaggattaaatagcgtggattgtacagaacgtacaccacgtatggtaagagcattgggt
acaaatgtaataatacaaattgcatgtggcgtagagcattcgattgccttaaccaacgac
ggagatttgtttgcctggggtagtaacaaggaaggacaactaggattaggaattcataca
gttaccgaaataaaacctaaaaagatatccactttagctgccgtaccaattgctttcgtc
gcatgcggaggataccatactatagtcatatcaaaatcaggagcagtattttcatgggga
cgaaacaccttcggacaattaggactaaatgatacgcaacaaagaaacttgccttgccaa
ttgcgtactttacgaaatgctaaagtatgctacgcaacctgcggagaagaattctctgct
tttctgacactggatggtggagtgttcacatgcggcgctggaatgtacggccaattagga
cacgggaacaatacgaatgaaattttgccgcgacaagtcatggagttgatgggcagtaca
gtaacacaaattgcctgtggtaagaggcacacgttggctttagtgccgtcacgaggtaaa
gtttacgcgtggggtctcgggggtgctgggcaactcggtaatcgcgccgcgcgaagtgcc
acaacgccgcaagttgtacttggaccgtggtcctcgccgagcggatcatcgatgctgctc
gacttgtactacacttcccagattgattgtgtcgttagacatattttcagcggcggcgat
cattgttttgccaccatcggcccgaaaaaagataatatagagccagatgactgtagaata
ttaggatcaacctccaaaattcttacagtgacagaagagaaaatagtcgattgtcaaaaa
gtttcatcaggctcgcaagttaatcatgacttaatgacatatctagaaactgtattcaaa
agtcaagcatctataaatggttctttcttactcgccaatgatgctcattacggctgctcg
agtaagcatcacggtgttgatatcgacgatgcgattaaattgttcgggatgatctcggaa
ttggaaaacaacacgattcaagaactgatttatacgtgtatcactgacagtttgataccg
tcttttgccatatctccgccagacgtggaatccttgagagtgtacttaacgttgccactc
tatcaccgttttgcgaatctgtcgcactacagttctctgcagacgcctttctgcaaggcc
ctactgcgcttaaaggcggaggcttctaaggttgtaggtatatggtggagcgcagctccg
gaatattactttgaaagactggtcaggatttacaagtctgtggtgctgcacttcgtaaag
caatcgacagcggacaaggttgtcacgtggaatgaaagtctacaatctgctctaaatcta
ttgcgattattgtataaactaaatgtctcggcgggtatgcgactgccgtatgagactttt
cacctgtcggagttgtcgcagtatattgatgtcaaccgcgattatctcaagtggatgtcg
gatgatcagtttacctaccataaaatatatttttgcaattacccttttctattcgacgcc
gaggcgaaaaccacgttactggaaaccgatcaagctatacagatgcaatccgcgatgcac
gaagcggcaacacgggtcgttagggacataatgttcggcacgaccaattcaaacatccag
cagtacagacaatttgtaattttgaacgtgtcgcggaataatttagtctccgacgctctg
acgcaattgcagcagtacgattccagcgagctgaagaaaccgcttagagttaaatttaac
gaggaggaggccgaagatgtgggcggcgtgaaaaaggaattcttcatgcttctgctgcga
gagatcctcgatcctaagtacggtatgtttaaagaatacgaggagacaaggacaatctgg
ttcagctcggactcgttggaggatggagttatgtattttctaatcggcctcctctgcggc
ttggctatttacaatttcataatcatcgatttaccgtttccattggccttatacaaaaaa
ctgttgcgagaaccggtcggattgaatgatatcaagcagttgtcaccgataatagccaaa
agtcttcacagcattctcgactatcaagaaccagattttgaggaagtattctgcttgaat
tttgagataactagagatgtgtttggcgaacaaaaacgtttcgaattctttccggacggt
agcaaagttcctgtaacattgaaaaataagcaacaatacgtagacttctacgtggactac
atattgaacaaatcggtggaaacacatttccaaatgttcaacaagggttttcacaaagta
tgcggcggaagggtgttggagctgttccacagccacgaattgatggcgctgttggtcggc
aatgaaaattacgattgggaggaattagaaaaaaatgccacttataaagacggttattcc
aaggacgatcccactatcgtgttcttctggcaagtttttcatgaactaccgctagaagag
aagaagaaatttttacttttcttaacgggtagtgacagaatacctatacagggtatgaag
gctatcaagatcacgatacagccgatgactgatgaccggtttttgccagccgcgcacacg
tgctttaacctgctcgatctgccgcgttatcaaacgcgcgaaagattaaaatacaagtta
ttacaagctatccaacaaaatctaggattttcgctcgtgtaa
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