Linepithema humile (Argentine ant): 105671691
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Entry
105671691 CDS
T04898
Symbol
vas
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105671691 (vas)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105671691 (vas)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105671691 (vas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
105671691
NCBI-ProteinID:
XP_012221478
LinkDB
All DBs
Position
4:complement(26380859..26385664)
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AA seq
696 aa
AA seq
DB search
MAMVEEWGNDDVDFSQSLNTSTFEEGHAPSRGKGRGTILYDNDSIRHVGGNQSYNEKTDD
HQENYDDNTQNEDYENNRYNGNNGNRFGGNSRRQGNDKPRYGNNRGDDDGNDRKWQGNRD
RNDSRRNRNDNGETEDNGYGGNYQNDKRDRPRRDRDDNRGERGERGGRGGYGRNRGNGDS
GGYNENDNEDRGGRRRNGGNFKEDNDEGEPKKREIYIPPEQPDDENSLFGNDVSMGINFD
RYDDIEVKVTGENAPHPIRVFDEAGLRSILVENIKKSGYKKPTPVQKYAIPIIMNGRDLM
ACAQTGSGKTAAFVVPIIHTLLENPTDLIKTSTSCEPQVIIVSPTRELTRQIYEQAKKFS
LGSILRVEMAYGGTSCNHQTNKILQGCHILVATPGRLLDFIGRDKVKLSSLRFFVLDEAD
RMLDMGFLPDIEKIVDHETMAPVENRQTLMFSATFPCEIQELASRFLRNYLFLAVGIVGG
ACADVEQNFYQASGQSEKRKLLKELMEKQNQMGSLEGTLVFVEQKRHTDFIAAFLSESNF
PTTSIHGDRLQREREEALADFKRGKMSILVATAVAARGLDIKNVAHVINFDMPKTIDEYV
HRIGRTGRVGNRGKATSFFDLNTDMPLTGDLVKILKQANQPVPDWLGSGGGSRTFAPGRF
NKFGGEDIRGSNNAYGETYDVIGSAPPVQEEPEEMW
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtggaagagtggggaaacgatgatgtggatttttcgcagtcattgaataca
tctacgtttgaggaaggtcatgctccaagtcgcggcaaaggacgtggcacgattctatac
gacaatgactcaattcgacatgtgggaggaaaccaatcctacaatgaaaaaacggacgac
caccaggaaaattatgacgataatactcagaatgaagattacgagaataatagatataat
ggtaataacggcaatagatttggaggaaacagtaggcgacaaggcaatgataagccacgt
tacggaaataacagaggtgacgatgatggaaatgatcgcaagtggcaaggcaacagagat
agaaacgatagtagacgaaacaggaacgacaacggcgaaactgaggacaatgggtacggc
ggaaattaccagaacgataaaagggacaggccaaggagagatagagatgataatagaggt
gaaagaggtgaaagaggtggaagaggtggttatggtagaaacaggggtaacggcgatagc
ggtggttacaatgaaaacgacaatgaagacagaggaggacgcagaaggaacggcggtaat
tttaaagaagacaacgacgaaggtgaaccaaaaaaaagagagatttacattccgccggag
caacctgatgacgaaaattccctgtttggaaatgacgtgtcgatgggaataaactttgat
agatatgatgacattgaggtaaaagtaactggtgagaatgcaccacacccaatacgtgtt
tttgatgaagccggtttgagaagtatcctggtggaaaatattaagaaatcgggctataaa
aagcctactcctgtccagaaatacgccattccaattataatgaacggtcgtgatttaatg
gcttgcgcacaaacaggttctggtaaaactgcagcattcgtagttcctattatacacact
ctattggaaaatcctacagatttaattaaaacgtctacttcctgcgaaccacaagtaatt
attgtatcgcctacacgtgagcttacccgacagatttatgaacaagctaagaaatttagt
ttaggctcaatcttgcgtgttgaaatggcttacggaggaacatcatgtaatcatcaaaca
aataagattcttcaaggttgccatattctagtcgccactccaggcagattgttggatttt
attggaagagataaggtcaaactctcttctttgcgattctttgtattggatgaggcagat
cgaatgctagatatgggctttctacctgatatcgaaaagattgtggaccatgaaacaatg
gcacctgtagaaaatagacagacacttatgttctctgccactttcccgtgtgaaatacaa
gaattggcaagtcgatttttgcgcaactacttattcctcgcagttggaattgtgggtggt
gcgtgcgctgatgtagaacagaacttctatcaagcatctggccagtctgagaaacgaaaa
ttgttgaaagaactgatggagaaacaaaatcagatgggaagtctcgaaggtactttagta
tttgtcgagcagaagagacatacagactttattgctgctttcttgtccgaaagtaacttt
ccgacgactagtatacacggcgacagattgcagagagaacgagaagaagctttggccgat
tttaaacggggcaaaatgtcaatcttggtagctacggcagttgccgcgcgaggcttggat
attaaaaatgttgctcacgtaattaatttcgatatgccaaaaacgatcgatgaatatgtt
catagaattggacgaacaggccgagtaggaaatcgtggaaaagcaacttcattctttgat
ttaaatacggacatgcctcttactggcgatttagttaaaattttgaagcaagctaatcaa
ccagtacctgattggctgggatctggaggcggtagcagaactttcgcaccaggaagattc
aacaagttcggcggagaagatatcagaggaagtaataacgcatatggtgaaacatatgat
gtcattggttctgcgcctcctgtacaagaagaaccagaggaaatgtggtag
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