KEGG   Linepithema humile (Argentine ant): 105671715
Entry
105671715         CDS       T04898                                 
Symbol
Smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lhu  Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lhu03041]
    105671715 (Smu1)
Spliceosome [BR:lhu03041]
 Complex B
  Other components
   Complex B specific factors
    105671715 (Smu1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_IP5PC_F Mala_s_1-like PROPPIN WD_LRWD1 WD40_like VPS8_N LisH_WDR26 DUF7165 zf_topless
Other DBs
NCBI-GeneID: 105671715
NCBI-ProteinID: XP_012221535
LinkDB
Position
2:complement(30446558..30449065)
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSTSFDTTIRIHGLKSGKTLKEFRGHGSFVNEVVFSPD
GHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSVHTLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcaattgaaattgaatctgccgatgtgatcagattaatacagcaatatttgaaagaa
tcaaatcttgtaaagacactgcaaactttacaggaggaaacaggtgtgtcactgaacact
gtcgacagtgtggatggatttgttgctgacataaataatggccattgggacacagtttta
aaagctatacaatcgttaaaattacctgacaagaagcttatagatctgtatgaacaggtt
gttctagaattgattgaactaagagaattaggtgcagcacgttccttattaagacagact
gatcctatgattatgatgaagcaacaagaacctgagagatatattcatttagaaaatcta
cttgcgcgttcgtattttgatccacgcgaagcatatcccgatggaagcacaaaagaaaaa
cgaagagcatacatagcaactgctcttgctggcgaagtgtcagtggtaccttccagcagg
ttgctcgctctgttgggacaagcattgaagtggcagcaacatcaaggtctgctaccgcca
ggaaccacaatagatttgttcagaggaaaagcagcggttcgcgatcaagaagacgagaaa
tatccgacacaactttcaaagcagatcaaatttggccagaagtcgcatgtggagtgcgca
cgtttctcgccagacggtcagtacttggtgaccggttcggtggacggttttatcgaagtg
tggaactttacgactggcaagattaggaaagacttgaagtatcaggcgcaagacaacttt
atgatgatggagcaagcggtgctgtcgatgtcgttcagccgcgacagcgagatgttggcg
ggcggcggtcaagacggtaagatcaaggtctggagagtgcagagcggtcagtgcttaaga
agattcgaaaaggcgcattcgaaaggagtgacctgtttacagttcagcagagacaatagt
caaattctatcgacttcatttgacacaactataagaatacatggccttaagtcgggaaaa
acgctcaaggaattccgcggtcacggttcgttcgttaatgaggtcgttttttctccagac
ggccataacataatcagcgcctcgtcggatgggactgtaaaaatttggagcttaaagact
accgaatgcataggcacttacaaatcattaggagccgccgatctcacagtgaacagcgta
catactcttccacgaaatccggagcactttgtcgtgtgcaatcgttccaataccgtagta
atcatgaacatgcaaggacaaatagtgagatccttctccagcggtaaacgagaaggtggc
gactttgtatgcacggtggtgagcccgcgcggcgaatttatctactgcgtcggtgaagat
ctcgtgctgtactgtttctccacgtcgtcgggaaaactcgagagaacgctcaatatacac
gaaaaggacgtgatcggcttggcgcatcatcctcatcaaaatttattatgctcgtacagt
gaggatggtttgttgaaattgtggaagccgtaa

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