Linepithema humile (Argentine ant): 105671914
Help
Entry
105671914 CDS
T04898
Symbol
RNaseZ
Name
(RefSeq) ribonuclease Z, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhu03016
]
105671914 (RNaseZ)
Enzymes [BR:
lhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
105671914 (RNaseZ)
Transfer RNA biogenesis [BR:
lhu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
105671914 (RNaseZ)
Prokaryotic type
105671914 (RNaseZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
105671914
NCBI-ProteinID:
XP_067209585
LinkDB
All DBs
Position
4:6135622..6139314
Genome browser
AA seq
835 aa
AA seq
DB search
MTFNVRLFVHHIGKHNYCTFSPFFIKSCILQRNLFARHGSSRTMPRPTLHVLNMQRTRQK
LLEKSMKYTGNINVSLQILGTGARGTPKCVYLAAGNTRYIFNCGEGSQRLANEHKSKLVK
LEHVFVTSASWDNLGGIPGMLLTIQDVGVPKVHVHGPKGTVDIFDAIKKFVLLQALKIHE
AKCDESEPYSDGAMTVTYVSITKSNPQETEPIDVKEEVVDNTISYYDYTNSNGKRVPDRV
EKEKKISKIEKKLEKKKISNVMSYICKLHPRAGKLDFEKCMKKGVPAGPLLKQLKNNQDI
TLPDGTVVLSKDVCSPMTPGPSFIIVECPSEDYLESFVNHPAFAQHQTTTSSKDDAPYCI
IHFTPQKIMDNPRYVDWMGKFGLNTRHIVLNEENECMGTEASHKHQYKLRLLHSDIFPSL
DEESFQKKTRVRLTHRSFFYSKSTYVFLYHCILFSSQAADMPVIYRPRTLHTVHLQPELR
LDTTNEVSLHSEEYINEVFETEGFLDVLAELQTDINARTKELSIGTEYPKIVMLGTGSSV
PSKVRNTSGILLRVDEDHSMVLDCSEGTFRQIMKIYGKSETDKILKTIKAVYVSHLHADH
HIGLIGLLKERGAVTQDSLYLFAPSHIAAWLQLYHKRFEPILHRMTLISNSELFMNIHNP
NDLKYLDMYKTLNVQAVRTVYVKHCPYSYGVSVTLHNGKKIVYSGDTMPTENLVKLGQDC
DLLIHEATMEDDLIEEAKIKFHSTVSQAVEMGEKMQAKFTLLTHFSQRYSVIPHLPEAEN
GTKLDNVGIAYDNMHISLSQLPLLPLMYPALKLMFNKYYMVLEDRAAKRQNMAAK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaacgtacgcttattcgtgcatcacattggaaagcacaattactgtacgttt
tcaccattttttataaaaagctgcattttgcagcgaaacttgtttgctcgtcacggatct
tccagaaccatgccgcgtccaactttacacgtactgaatatgcaaaggacgagacagaaa
ctcttagaaaaatccatgaaatacactggcaatataaacgtatcattacaaattctgggc
accggagctcgtggtacgccaaaatgtgtttatttagcggcgggaaacaccaggtatatc
tttaactgcggggaaggatcgcagagactggcaaatgagcataaatccaagttagtaaag
ctggaacatgtgtttgtaacatctgcgtcttgggataatttaggtggtatcccaggaatg
ctcttgacgatacaagatgttggagtgccaaaagtccatgtgcacggtcccaaaggaacg
gtagatatatttgacgcaatcaagaagtttgtgttgctgcaagctctaaaaattcacgaa
gccaagtgtgatgaatcggagccatattcggatggggcaatgaccgttacatatgtttcc
attacaaaatcaaatcctcaggaaactgagcctattgatgtgaaagaggaagtagtggac
aatacaatcagttattatgattatactaattctaatggcaaacgagtacctgatagagta
gagaaggaaaagaagatatcgaagatcgaaaagaagttggaaaagaagaaaatatccaat
gtaatgtcttacatttgtaaattgcatcctcgtgcgggcaagttggactttgaaaaatgt
atgaagaaaggtgtaccagctggtcctttgttgaaacagctcaaaaataatcaggacatt
actcttcctgacggcacagtcgttttgagcaaagatgtttgctctcccatgacgccaggt
ccttctttcataattgtagaatgcccatcggaagattatttagaatcctttgtaaaccat
cctgcctttgcacaacaccaaacgacaacgtcgagcaaggatgacgcgccttattgcatc
attcatttcacgcctcaaaaaataatggataaccctcgttacgtggactggatgggcaaa
tttggtctcaacacgcgtcatatagttttaaatgaggagaacgagtgtatggggaccgaa
gcgagccacaagcatcagtataaacttcgtttattgcattctgatatattcccttctttg
gacgaagaaagctttcaaaagaaaacacgggtgagattgacacatcgaagcttcttctat
tccaaaagtacttatgtgtttttatatcactgcatacttttttcctcacaggcggcggac
atgcccgttatatatcgccccagaacccttcacaccgtccacttgcaaccggaattgaga
ctcgatacaacaaacgaagtatcgttgcattcggaggagtacataaatgaagttttcgag
actgagggtttcctagacgtgttggcggagctgcaaacggatattaacgctcgaacgaaa
gaattgtctattggaaccgaatatccaaagatcgttatgctgggtactggttccagcgtt
ccgagtaaagtcagaaacacgagcggcatactcttgcgagtggacgaggaccatagtatg
gtgctagactgcagcgagggtacgttcaggcaaatcatgaaaatctacggaaagtccgag
acggataagatcctgaaaacgatcaaggcggtgtacgtgtcgcatctgcacgcggatcat
cacatcggcttgatcggtttgttaaaggaaagaggggctgtcacgcaagattctttgtac
ctgttcgcgccgtcacatattgccgcgtggctacagctgtatcacaaacgcttcgaaccc
attctgcaccggatgacgctaatatcgaacagcgagctcttcatgaacatacacaatccg
aatgacttgaaatacttggacatgtacaaaacgctgaacgtgcaagctgtgagaactgtg
tacgtcaagcattgtccttattcgtacggcgtttctgtgacgctccacaatggaaagaag
atagtatacagcggagatactatgcccaccgaaaatctcgtgaagctcggtcaagattgc
gaccttttgattcacgaagcaacgatggaggacgatctgatagaggaagcgaagataaag
tttcactcaacggtctcacaggccgtagaaatgggcgagaaaatgcaagcaaagttcacg
ctattgacgcacttcagccaacgatactctgttatacctcacttacctgaagccgagaat
ggcactaaactagataacgtcggtattgcatacgataatatgcatattagcctgtcgcaa
ttgccactcttgcctttaatgtatccggcactaaaattgatgtttaacaaatattacatg
gtgctagaagaccgagctgcaaaacggcaaaatatggcagcaaagtaa
DBGET
integrated database retrieval system
