Linepithema humile (Argentine ant): 105672019
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Entry
105672019 CDS
T04898
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105672019
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105672019
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF3730
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
105672019
NCBI-ProteinID:
XP_067208488
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Position
1:11401133..11406901
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AA seq
1191 aa
AA seq
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MDEIECNLKSENPILISYAISILNEIIKKKYDALEEKDISKIPEFKFLTSKCINHENPTV
VTSTCQGLVTLAETGLWNAKLALATLTSMCSSKNYEAIIVAISQLLTLDWRICNGCSEYT
LQLPNQHPFIIILKQNKRSGICVVNQMKQIMYDDEKCIMEHSIEILRPVFLYIICDPVST
EVVNNSKSEAWQLVIKSNKAADLQMEILLWLCTNREDICVDSNCRLIELAEISMQNGNTE
YCTALAPLIASVTIQLLECNHNPQNNFFILLRLIKSCDSHIGNLMISLMAEIILICPNVY
LSKVFRICALIVEQMSYDTIFLNVLSVPLLTWLVYKIWLCPDEFKNLLTVIKQRQTRTSS
ICDDTAAATNKILRMISRNNKYILFYTEQIRSLHSLNNDIMPWLENLSLAPIDLKYTCKL
ILCGIFLYSEEPLVVCKTWDILLNIAKQIKSFESHVMSLVNHKLTVFHDSASTLQLLKAF
PQLGSMRIITSTLQTMQNSGRPLSDVTFEFYITAIKDNPRCYRFLSNALMEKLEQNSKLN
DWRTDVVCANTIKRICESHPEHGEELVPLLSLILNRCADTNGGAASALALDAISSLCKSA
VIGIYSTWKVLARKMRTEKRTMVLESLCDLFANIPSFPFRANDDHEKFIAEIATELWRYA
IGEDTRVAEAAFKALKSYPLELVPLSTLPLDFRSDLVVPSKNAVDKSDKSEDALQYIPGS
CWIQMLKKVNRSILPAARDLLIFYIENELTGFRSRIYNWPQGEPQNFKFLPERSVIRAIG
EHLRRSDKTDSNNRCVIMECLRVFNYDYKKPLPNIKWDFLEEIMKISDEAKELSLSIVSR
HCRISQSAKSLTERFLSMHTSASKTSQLLLNEKHLVLYSHLDELFQAFQPNSLQQFLETS
IDYFIDRILQKDEKSIDLFNWIMSAYGTALKSDLILIGNRTLLSTLMERVFEMVELTPDQ
DFSIFEIYYAALMHLTVKDIERITSPNIWWTETTKKLRNAIAVRTKLAFSGNFPGTPVTW
LSEIIETAASSPEMQRHFLESMQRVQTDLRLNKSFDLASQKDWIVDFMNRIALIMSEEEN
VCTTLYLDILFVSVICLSGLDCLLPKKELLITSQDDKIRLFPLAISVLIDRQIWKSASFQ
IMKWLNYMRTNCLISDVYVPAFQSALILLRGEEDYLLQWTNYLSSKTYIDL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatagagtgtaatttgaaatcagaaaaccctattttgatatcatatgcaata
tctatacttaatgaaataattaagaagaaatatgatgcattggaagaaaaagatatttca
aagataccagaatttaaatttctcacatcaaaatgcatcaaccatgagaatcctacagtt
gttacatccacatgtcaaggacttgttacacttgctgagactggattatggaatgctaag
cttgcattagcaaccttgacatctatgtgttcttcaaagaattacgaggcaattattgta
gctattagtcagttgttaacattagactggagaatatgcaatggatgcagtgaatatact
cttcaactacccaatcagcatccatttattataattctgaagcagaacaagcgcagtggg
atatgtgtggtgaatcaaatgaagcaaatcatgtatgatgatgagaaatgtatcatggaa
catagtatagaaatattacggcctgtatttttatacataatatgtgatcccgtctcaacg
gaagtggtcaataattccaaatcagaggcatggcagcttgtaatcaaatctaataaagct
gcagatttgcaaatggagattctactctggctgtgcactaatcgagaggacatttgtgtt
gattcaaactgtagactgatcgagctcgcggagatatctatgcaaaatggaaatacagaa
tattgcacagcattggcacctctaatcgcctccgtaacgatacagctgttggaatgcaac
cataatccgcaaaataattttttcatactattgagattgattaaaagttgtgacagtcac
ataggaaatctcatgataagtttgatggcagaaataatcttgatatgtccgaatgtttat
ttgtccaaggtttttaggatatgtgcacttatcgtcgagcagatgtcgtacgacacaatt
tttttaaacgtattatctgtacccttgttgacgtggttggtttacaagatatggttgtgc
cctgacgaattcaaaaacctgctcaccgtaataaagcaacggcaaacaagaacgagcagt
atttgtgatgatactgctgctgctacaaacaagatactgcgtatgattagccgcaataac
aagtacatcctattttacacagaacagatacgcagtctgcattctctgaacaacgatatt
atgccgtggcttgagaatctatcgcttgcaccgatcgatctaaaatacacttgcaagctg
atattgtgcggcatttttctgtatagcgaggaacccctcgtggtgtgcaaaacttgggac
attctcctgaacatagcgaagcagatcaagtccttcgagtcgcatgtgatgtccttggtg
aatcacaaattaacagtgtttcacgacagcgcttcgacgttgcaattattaaaagccttc
ccgcaactcggttccatgcgcatcatcaccagcacgttgcaaacgatgcagaacagcggg
aggccgctgagcgacgtcacattcgagttctacataacggcgataaaggacaatccccgc
tgctatcgtttcctatccaacgccttgatggagaaattggagcagaatagtaaattgaac
gactggcgcacggacgtggtgtgcgccaatacaatcaagcgcatatgcgaaagccatcct
gagcacggcgaggaactcgtgccgttgctatcgcttatcttgaatcgatgcgccgatacg
aatggcggtgcggccagcgcacttgcgctcgacgctatctcgagtctgtgcaagagtgcg
gtgataggtatctactcgacttggaaggtgctggcgcggaagatgcgcacggagaagcgc
acgatggttctggagagcctgtgcgacctcttcgcgaacatcccctcctttccgtttcgc
gcgaacgacgaccacgagaagtttatcgccgagatcgcaacagaattgtggcgctacgcg
atcggcgaggacacgagggtcgcggaagcggcgttcaaggcgctgaaatcctatcccttg
gaactagtacctctaagcacactgcctctggatttccgatcggacctcgtggtaccttct
aaaaatgcggttgacaaatctgacaagtccgaggacgcgctgcagtacataccgggctct
tgttggatccagatgctgaagaaggtgaacaggagcatcctgccagcggccagggacttg
ttgattttctacattgagaatgaactaacgggtttcagatcgcgaatatataattggccg
caaggagaaccgcagaacttcaagttcttaccggagagaagcgtgataagggctatcggc
gagcatttaagacgaagcgacaagacggactcgaacaatcggtgtgtaataatggaatgt
ctgcgcgtattcaattacgactacaagaaaccgctgccgaacataaagtgggacttcttg
gaggaaattatgaagatatcggacgaggccaaagagcttagtctgtcgatcgtgagccgt
cactgtcggatctcgcagtcggcgaaatcgctgacggaacgtttcttgtcaatgcacacg
tccgcgtcgaaaactagtcagttgttgctgaacgagaaacacttggtgctttattcgcat
ctggacgagctgttccaggcatttcagccgaatagcctgcaacaattcctcgaaacatcg
atcgattatttcattgatagaattttacagaaggacgagaagtcaatcgatttattcaac
tggattatgtctgcgtacggcaccgctttgaaaagcgatctgatactcataggaaatcgc
acgttgctatctactttaatggaaagagtatttgagatggttgaattgacgcccgaccaa
gatttctcaattttcgagatatattatgcagctttgatgcacttgacagtcaaagatatc
gagagaataacatcgccgaatatttggtggacagaaacgacgaagaaactgagaaacgcc
atcgctgttcgaacgaaattagcattcagcggcaattttcctggcacaccggtcacttgg
ttgagcgaaattatcgaaacagctgcaagtagtcccgagatgcagagacacttcctggaa
agcatgcagagagtgcagactgacttgagattaaataaatcctttgatctagcatcgcaa
aaagactggattgtggacttcatgaatcgcatcgcgcttataatgtcggaagaggaaaat
gtttgtacaactttgtacttggacattttgttcgtctcggttatctgtttatccggcttg
gattgcttgttgccgaaaaaggagctgttaattacttcgcaagacgataaaataagattg
ttcccattagcgatctctgtgctcatcgacagacaaatttggaaatcggcatctttccag
attatgaagtggttgaattacatgaggaccaattgcctgatatctgatgtgtacgtacct
gcatttcaaagtgcattaatattattgaggggcgaagaagactatttgttacaatggact
aattacttatcatccaagacttatattgacttgtaa
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