Linepithema humile (Argentine ant): 105672043
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Entry
105672043 CDS
T04898
Name
(RefSeq) WD repeat-containing protein 20 isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lhu04990
]
105672043
Domain-containing proteins not elsewhere classified [BR:
lhu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105672043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_HPS5
eIF2A
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
105672043
NCBI-ProteinID:
XP_012222156
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Position
1:complement(11840389..11851656)
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AA seq
671 aa
AA seq
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MAVQLDGGGKEDLKTQFVTREGTYKLMTLSEYSRPNRVGYTNSQGSASVRVSFVTLPDPA
DPTGAQGLGDRMCFNFGKELYVYVYRGVKKAVDLNKPVDKKLYKGTNPTCHNFNQTTATA
DSAPLLVGFSTGQIQLIDPIKKELSKLYNEDRLIDKSKVTCIKWVPGSNNLFLVSHSSGQ
LYLYNEELLCGNTAPHYQSFKSGDGYAIYTCKTKSTRNPLYRWVIGAEGSCINEFAFSPC
GTNLAVVSQDGFLRVFQYNTMELVGSARSYFGGFLCVCWSPDGRYVVVGGEDDLVTIWSF
HEKRVVARGQGHHSWVSVVAFDPYTTSYGDHDPDFSGSDDETTMPHNNHNHFHEKSHRLS
TTSQGGGGVHSNRNSCGSELRMSGGTCYRLGSVSQDTQLCLWDITEDVLRQPVCAKQRPS
AAGSTSGTLSSSGTFNSGNGTATANHHSNSNAKHNNSNNVNYKENASGNNETSNNSTGTN
AAVATVNSLTQRLAGLGFGERKGDNHKRNFSLTMRGGTGATAAAANNSTTTVVQNNGGDK
ASTGSSTNTTSSSLNNSVGGGLVGGTGNKKVSSVMDDPMRLIGTAWCPRFDECPVLEPLV
CKKLAHERLTELVFREDCFVTACQDGYVYTWARPGHMVGPLTISSTLHRPSHHHSNNPYT
SNINSMRCNDL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagctggacggaggagggaaggaggatctgaaaacacagtttgtcacgcgg
gagggcacgtacaaactgatgaccctgtcggagtactcgagaccgaaccgggtcggctac
accaacagccagggcagcgcgtccgtcagggtgtccttcgtcacgctgccggacccagcg
gatcccacgggcgcgcagggccttggcgaccgaatgtgcttcaacttcggcaaggagctc
tacgtctacgtctaccgcggtgtcaagaaggctgtggacttgaacaaaccagtggataaa
aaattgtacaaagggactaatccgacctgccacaattttaatcaaacaacagcgacagcg
gatagtgctccactgctggtgggattttccacaggacagatacagttgatcgatccgata
aagaaggaactcagcaagctgtacaatgaggataggttgatagacaagagcaaagtgaca
tgcatcaaatgggttcccggctcaaacaacctgttcctggtatctcacagctccggccaa
ttgtacctctataacgaagagttgctctgcggcaacaccgcgccgcattaccaatcgttc
aagtcgggtgacggatacgccatatacacctgcaagacgaagtctaccaggaacccactg
taccggtgggtgattggcgcggaaggttcttgcataaacgagtttgcctttagtccgtgc
ggtacgaacttagccgtggtatcccaagatggatttctgcgcgtatttcaatacaatacc
atggagttggtgggctcggcgaggagttacttcggtggctttttgtgcgtgtgctggtcg
ccggacggacgttacgtggtggtgggcggcgaggacgatttggtgaccatctggagcttc
cacgaaaagcgcgttgtggcgcggggacaaggccatcacagttgggtgagcgtagtcgcc
tttgatccgtacactacgtcgtacggtgatcacgatcccgactttagcggctcggacgac
gagacgacgatgccgcacaataatcataatcacttccacgagaagtcgcaccgtctgtcg
acgacctcgcagggcggcggtggcgtccactcgaaccggaactcctgtggctcggaactg
agaatgtcgggcggtacatgctacaggttaggcagtgtatcccaagatacccaattgtgc
ctgtgggatatcacagaggacgtactgaggcagccggtgtgcgccaagcagaggccctcc
gcggcgggcagcaccagcggcactctgtcatcctcgggtacgtttaacagtggcaacgga
acggcgacggcgaaccatcattcgaactcgaatgctaaacacaataattcgaataacgtt
aattacaaagagaacgcgagtggtaataacgaaactagtaacaatagcacgggcacgaac
gccgcagtggcgaccgtgaactcgttgacgcagaggctagcgggtcttggtttcggcgag
cgtaaaggtgataatcacaagagaaactttagcctcactatgcgaggcggcactggtgcg
acggcagcggcggccaacaacagtacgacaacggtcgtgcagaacaatggtggcgacaag
gcgagcaccggcagctcgacgaacacgacgagtagtagtctgaacaacagtgtcggtggg
ggtttagtaggtgggacgggcaataaaaaggttagttccgtgatggacgatcccatgagg
ttgatagggaccgcctggtgtcccaggttcgacgagtgcccggtcctcgagccgctggtg
tgcaagaagctggcgcacgagagactgactgaattagtgtttagggaagattgcttcgtg
acggcgtgtcaggacggatacgtgtacacgtgggcgaggcccggccacatggtaggtcct
ctcacgataagcagcaccctgcacaggccatcacaccatcatagcaacaatccctacact
agtaatatcaattccatgcgatgtaacgacctctga
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