Linepithema humile (Argentine ant): 105672155
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Entry
105672155 CDS
T04898
Symbol
shg
Name
(RefSeq) DE-cadherin
KO
K27891
DE-cadherin
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lhu04515
]
105672155 (shg)
Cell adhesion molecules [BR:
lhu04515
]
Cadherins
Cadherin related
105672155 (shg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
CADH_Y-type_LIR
Laminin_G_2
Cadherin_FAT4_N
Laminin_G_1
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
Rep_fac-A_3
DUF443
Motif
Other DBs
NCBI-GeneID:
105672155
NCBI-ProteinID:
XP_012222312
LinkDB
All DBs
Position
4:21355553..21494937
Genome browser
AA seq
1504 aa
AA seq
DB search
MIEKYVGRPGARPRFLLMQPVFVIAAYLLLHGTLATATRLRHSRHLDVRSQYQGEEVLTS
NGNHNHKPLFSNCSNYAPVVKEEEPAGTVVIQVQAEDRDPEDEGGTITYSFVTAPDEKLK
FEINNKTGLIRTTQMLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNSPV
FDKVAYTESVPQDLPIGREVMRVSATDIDDGNNSVVRYKLSPKRQDDGVYFRIDHETGVI
FLNKVIDRSPDYKFSMTATANDLGEYPKPQFSVIDLDIRVVESHKKAPAFIPRSMEPIKL
KENFNDFDASIISLKAVSNIDNSTNSDNSYLLFELVPGRTEQTNKGNTFRLESNKDTADI
KLSHTLDYESNTQYSLIVRVQNKYQLAAETVVDIEVLDVNDNIPVFRDIKKGSVLENEDP
GVPVMQVRAIDADGTSANNQVSYELDNFKDLFKIDSRTGNITTLVTFDREKEDTYNVKVI
ATDNSPSALFKTGEHNKGQQVFRIEIADKNDNAPNFTRKVYTHNSIYENANINAPVTEVK
AMDADTASPVTYRIISGNSEDSFYIEGTTGKIRVKNSLDYEKITKYNLTVLAYDGVYNDT
AQVEIFIENVNDNPPLFGQFEKNPEIDEETLVDGCITTVNAYDPDIEDRSADQHISYFIV
KDDQLPFIMIDKSGCMKLKKPLDRDPPNGYSMWTIIVMARDEDGSTTALQSLVMVNITLH
DINDNAPFLDMPYPVIWGENKDPNKVTKITELKARDYDSEKNGPPFKFRIDDSADDEILS
KFEIREMNLHARVKFDREEQKSYDIPIAITDSGMPPMTGTSTLTVIIGDENDNAMQEGSS
SIFVYNYKGEAPNTEIGRVYVNDPDDWDLPDKSFDWAPHVYHNEFYLNASNGMITLLSGT
SNGTFALKFIVTEKAYLIDSHQVYAYVNVTVKELPEEAVEKSGSVRFYGITAEQFVEPDE
SGISKKEIFQEKFASMLNTSVENIDVFTVLYSPHYNNKSLLDVRFSAHGSPYYAPEKLNT
ILAQHSKEIEKAIKADILMVNIDECLFEKIHCNNSCRNFLNTSTVPYPVYTNTSSFVSVR
AVIDPQCTCTVAEPIVCLNGGTPLGERCECPPGLEGPRCELLGIGFHGDGWAIMPSPGQA
CDESHLGLEITPYVDNGLVFYFGPINYNPKLGIQDFMALELQQGFAVLYIDYGTGTVRLD
QKQIKLTDGKSHRIDVFWKKTSIEMQVDKCTISACMSLTAPQGTNEFLNVNGPMQIGGTL
SNLAHLSSHLGWDHKPTSKGFVGCIRNMTFNGNTYNLGMPSLSRNADPGCNHGMAKAISF
GIDTNFIVAILVCVLILLILLVAVVVHRRKTDDLYKDMDDIRENIINYEDEGGGEVDTGY
DLNVLRAIYDAPPIDSKIAPVGLQGRGADEVPDICGFLDGKKESCDKDPDTNPFDDVRHY
AYEGEGNSEGDLSSLASCTDDGDLKFNYLSNFGPRFRKLADMYGEDPSDEESDGVGERES
ESWC
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaaatatgtcggacggcccggggcgaggccccggtttctcctcatgcaacct
gtcttcgtcatcgctgcctatttgctgctccacggaactcttgcgactgcaacgagattg
aggcactcgagacacctggacgtgagatcgcagtatcagggcgaggaggtattaacgtcc
aatggaaatcacaaccacaagccgctgttctccaactgctcgaattatgcgcccgtggta
aaggaggaggaaccggctggcacagtggtgatccaggtgcaagccgaagatagagatcct
gaggacgaaggaggtaccattacgtacagtttcgtgactgctcccgacgagaagctgaaa
ttcgagatcaataataagacaggtctcatcaggacgactcagatgctcgatagggacgag
cccgccagagagaaagaggcttacctcacggtactcgcgaccgacaatggaaggccgcag
ctggatgacgtgtgcacatttaaggtcactatcgaagatgtcaacgacaattcgcccgtc
ttcgataaagtggcatatacggaatctgtgccgcaagatttacccatcggccgcgaagtc
atgagagtttccgcaaccgatatcgacgatggcaacaattccgtcgtacgatataagctg
tcacctaagagacaggatgatggtgtatactttcggatcgaccacgagaccggtgtcata
ttcctcaacaaagttatagaccggagtccagattataaattcagtatgacggccaccgct
aatgatcttggcgaatatccaaaaccccaattcagtgtcattgatcttgacatacgggtt
gttgaatcgcataagaaagcgccagcttttataccgaggtcaatggagccaattaaactg
aaggagaatttcaacgattttgatgccagcattatcagtttaaaagcagtttccaacatt
gacaactcaactaattcagacaattcgtatctactctttgagcttgttcctggtagaacg
gaacagaccaacaaggggaacactttcagattggaatccaacaaggacacagcggatatc
aagctctctcacaccctggattacgaaagtaacacccagtattcgttaatagtacgagta
caaaataagtatcagttggccgccgaaacggtagtcgatatcgaagttctcgatgtaaat
gacaacattccagtcttccgtgatattaaaaaaggaagcgtgttagagaacgaagaccca
ggagttcctgtgatgcaggtgcgagcaatcgacgctgatggaacgtccgccaataatcag
gtcagctacgagttggataactttaaggacctcttcaaaatcgattcccgaactggcaat
attacgacattagtgacgttcgatagagagaaggaggacacatacaacgtcaaagtaata
gcaacggataattctccgagtgctttgttcaaaactggcgaacacaataaagggcaacag
gtgttccgaatcgaaattgccgataagaatgacaatgcacctaacttcactcgaaaggtg
tacacccataattcgatttatgagaacgcaaatattaatgcgcccgtgactgaagtcaag
gccatggatgccgatacagcaagtcctgtcacgtacagaatcatatcggggaacagcgaa
gatagtttctacatcgaaggcacaacgggaaagattcgcgtgaaaaattcgttggattat
gaaaagatcaccaaatataatttgactgtattagcgtacgacggtgtgtacaacgatacg
gcgcaagttgagatttttatcgaaaatgttaacgacaatcctccacttttcggacagttc
gagaaaaatccggaaatagatgaagaaacattagtagatggctgtatcaccactgtgaac
gcttacgatccggatatcgaagataggagtgccgaccagcatatctcctactttatcgtt
aaagacgatcaactaccttttataatgatcgacaaatctggttgtatgaagttgaagaag
ccattagatcgcgatccgccgaatggttattcaatgtggactattatcgtaatggcaaga
gacgaagacgggtcgaccaccgctttacaaagtttggtaatggttaacatcactctccat
gatataaatgacaacgcaccatttctcgatatgccttaccccgttatttggggtgaaaac
aaggatcctaacaaagtaactaagataaccgagctgaaggcacgagattacgattctgag
aaaaatggaccaccattcaaattccgaattgacgatagcgcggatgatgaaattctatcc
aagttcgagatccgcgaaatgaatctccatgcgcgagtaaaatttgatcgggaagagcag
aaaagctacgatataccgatagcgattacggatagcggcatgccaccaatgactggtact
tcaacactcactgtgattattggcgacgaaaatgacaatgccatgcaggagggttcgagt
tctatattcgtttacaattacaaaggagaagctcctaatacagaaattggacgcgtttat
gttaatgatccggatgattgggacctgccagataaatctttcgactgggctcctcatgtt
tatcataatgaattttatctaaatgctagtaacggcatgatcactttactgtcgggcaca
tcaaatggcaccttcgcattgaagtttatcgttactgaaaaagcctatcttatcgattcg
catcaggtatacgcgtacgtgaacgtcaccgttaaggaacttccagaagaggctgtggag
aaatccggttccgtgcgattttatggaataactgcggaacagttcgtagaacccgatgag
tctggcattagtaagaaggaaatattccaagagaaatttgcttccatgctaaacacatcg
gtcgaaaatatcgatgtgttcactgtgctttattcacctcattacaacaataaaagtttg
ctcgatgtccgattttcggcacacggcagtccgtattacgctcccgagaagctaaatacc
attttagcgcaacattcgaaggaaatcgaaaaagcgataaaggcggatattctaatggtg
aacattgacgagtgtctattcgagaagattcattgtaacaattcgtgccgtaatttcttg
aataccagtactgttccatatcccgtttataccaataccagctcgtttgtcagtgttaga
gcggttatagatccgcagtgtacctgcaccgtagcggaacctatcgtctgtttgaacggt
ggtacacctcttggagaacgatgcgaatgtccgcctggtttagaaggaccgagatgcgaa
ctattgggtatcggttttcacggagacggctgggctattatgccgtcgcccggtcaagct
tgtgacgagtcacatttggggttggaaataacgccatacgtggacaatgggctagtattt
tatttcggtcctataaattacaatcctaaacttggaattcaagattttatggctttagaa
cttcagcaaggctttgctgtgttatatatcgattatggaacgggaactgtaagattagat
cagaaacaaatcaaattaacagacggcaagagtcacagaatagacgttttttggaagaaa
acttctatagagatgcaggtcgataagtgcaccatatccgcttgcatgagtctcaccgca
ccgcaaggaaccaatgaatttttaaatgttaacggcccgatgcaaatcggtggtacattg
agcaatttagcgcacttgtcgtcacatttaggctgggatcataaaccaactagtaaagga
tttgtcggctgtatacgcaacatgacattcaatggaaacacgtacaatttgggtatgcca
tcgctatctagaaatgcagatcccggttgcaatcacggcatggcgaaagccatctcattc
ggcattgatacgaacttcatagtagccatattagtatgcgtgctaatattgttaatatta
ctcgtggcggtagttgttcatagaaggaaaacggacgatttgtataaggatatggatgac
attagggaaaatattattaattacgaggatgaaggaggcggtgaggttgatacaggatac
gacttaaatgtgttgagggctatttacgatgcaccacctatcgattcgaagatagctccg
gttggcctgcagggtcgaggagccgatgaagttccagacatttgtggtttcctagatggt
aagaaagaaagctgcgacaaagatcccgatacaaatccattcgatgatgtaaggcactac
gcttacgagggagagggcaattcggaaggcgatttatcgtcgttagcatcctgtactgac
gatggagatctaaagttcaattatctgtcgaattttgggccaagattcagaaagttggca
gatatgtatggagaagacccaagtgacgaagaaagtgacggagtcggtgaacgagagagt
gaaagttggtgttga
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integrated database retrieval system
