Linepithema humile (Argentine ant): 105672218
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Entry
105672218 CDS
T04898
Symbol
Optix
Name
(RefSeq) homeobox protein SIX3 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105672218 (Optix)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105672218 (Optix)
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
105672218
NCBI-ProteinID:
XP_012222426
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Position
4:17069817..17118160
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AA seq
479 aa
AA seq
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MSAAGTTPPNATQGPIVPAPLFALPTLSFSVSQVATVCETLEESGDIERLARFLWSLPVA
HPNIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAE
KLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKRE
LAAATGLTPTQVGNWFKNRRQRDRAAAAKNSRMQQQSGQGNGNARRNLSPGPGSSSEESD
ISLGGTSPPSPSSSPPPNHQPSPVPLGSLGPLPTPSLNFRFDPTQPHFRFGHTTAFKFPP
TSFRFGPHSPQPNHPNMPGGGIFRFTESSPFQAVGPRGDPASRENAVLSLFDYRLPDPLG
LPPPRLHPHDGLLHHPHPQHQLSEGISRISEASRLSDGGLSRLSDSLSEAHSPPLMAANL
SVTGPLRVAVPSPHTPSSRGSPPPRQPTPQGQSQGQGLIRVATPPPNPKPQIHRPFSPA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgctgggaccacgccgccgaacgcaacgcaaggtccgattgtacctgctccg
ttattcgctttgccgacgttatctttttccgtcagccaggtggccacggtctgcgagact
ttggaagaaagcggcgacatcgaaagactggccaggttcctatggagcctcccggttgct
catcccaacatccaggaattaaatcagagcgaggctgttctccgggcgcgtgctatcgtg
gctttccactcgggacattaccgggagctctacgccattctagagaggcacaaattcacc
aaggactctcacggcaagctgcaggcaatgtggctggaagcgcactaccaggaggccgag
aaactccgcggccgaccgttgggtcccgtcgacaagtatcgtgtcagaaagaaatttccg
ctgccgcgaacgatctgggacggcgagcagaagacgcactgcttcaaagagagaaccaga
tcgctgctcagagaatggtaccttcaggatccgtatccgaatccgggtaagaagagggag
ctggccgccgcgacgggactcacgcctacgcaggtcggaaattggttcaagaatagaagg
cagagggatcgcgctgctgcggcgaaaaacagcagaatgcagcaacaatcaggccaaggg
aacggaaacgcgcggcgcaatctaagcccggggcctggcagcagcagcgaggagtccgac
atttcgctcggtggaacatcgccaccgtcgccgagttcctcgccgccgccgaaccatcaa
ccgtccccggtccctctcggatcactcggacctctgccaactccatccttgaatttccgt
ttcgatcctacgcaaccgcactttcgcttcggccatacgacggctttcaagtttccaccg
acgagcttccgattcggaccgcatagtccgcagcctaatcatccgaacatgccgggcgga
gggattttcaggttcacggagtccagccctttccaagctgtgggacctaggggtgatccg
gcgtcgagagaaaatgcagttctttctctcttcgattacagattgccagatccgttgggg
ttaccgccgccgagactccatccgcacgacggcctactgcaccacccacatccccagcat
cagctgtccgagggaatatccaggatatccgaagcgtcgcgactatccgacggtgggtta
tctcgcctgtcggacagcttatcggaggcccacagtccgccattgatggcggcgaatctg
tcggtcacgggtccgctgagagtggctgtacctagcccgcacaccccctcttcccgaggt
agtccgccccctcgtcagccgacacctcagggtcaatctcaaggtcagggactgataagg
gtcgccacaccgccgccgaatccgaaaccgcaaatccacagaccgttctcgcccgcgtga
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