Linepithema humile (Argentine ant): 105672303
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Entry
105672303 CDS
T04898
Symbol
Dbp45A
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105672303 (Dbp45A)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105672303 (Dbp45A)
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
Helicases
105672303 (Dbp45A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105672303
NCBI-ProteinID:
XP_012222581
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Position
4:17203578..17205668
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AA seq
456 aa
AA seq
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MNEEIKSFSDLKLNSWLLTQCESMGLKKPTMIQQNCIPHILAGEDCIGCAKTGSGKTLAF
ALPILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKAINLKKCVIVGGMDMMVQGLE
LSKRPHIVVATPGRLVDHLDSCDTFSLQKIKFLVLDEADRLLGGHFDEQLKNIFAAVPKQ
KQVLLFSATMTDALDKVKQIASSKVFIWEEEDDAGIATVRELDQRYVLCPKDVLDSFLVE
VIRTFRATNKNGSIMIFTDTCKHCQLLSMTLNDVGFTNVALHAMIKQKERLAALNKFKSN
YVQILIATDVAARGLDIPTVELVVNHIIPNVPKEYIHRVGRTARAGRGGMAVSLITPNDI
KLLHAIEDTIGTKLTEYKVDDKEIVTILTQISVAKREAEIRLDETDFYEKKMINKRKKLI
LEGKDPDEIEELLEEQKKKRKKPKKRKNAEQTIDIK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaaataaaaagtttttcggatctaaaactaaactcttggctccttacacaa
tgcgaatctatgggtttaaaaaagcccactatgattcagcaaaattgtattcctcacata
ttagcaggtgaagattgtataggctgtgccaaaacaggtagtggcaagactcttgcattt
gctctgcctattttgcaaaaattatgcgaggatccatatggtatatttgctcttgtgtta
acaccaacaagagaattagcttttcagattgctgaccaatttgccgcaattggtaaagct
atcaatttgaagaaatgtgtaattgttggtggcatggatatgatggtgcaaggattggaa
ttgtctaaacggccacatatagttgtggctacaccaggtagattagtggatcatttggac
agttgtgatacattttccttgcagaagattaaatttctagtattggatgaggctgataga
ctgctgggtggtcattttgatgaacaacttaaaaacatatttgctgcagtacccaaacag
aaacaagtattattatttagtgccacaatgacagatgctcttgataaagtaaaacaaata
gcttccagtaaggtttttatatgggaagaagaggatgatgctggtattgctactgtaagg
gaattagatcaacgttatgtgttatgtcctaaagatgtgcttgattcatttctggtagaa
gtgattaggacatttcgtgccacaaataagaatggctccatcatgatattcacagatact
tgcaagcattgtcaactattatcaatgacgctgaatgacgttggatttacgaacgtggcc
cttcatgcgatgataaaacagaaggaacgcttggccgcgctaaacaagttcaagtccaat
tatgtacagattttgattgctaccgatgtcgcggcgagaggcttagacattcccacagta
gaactggtcgttaaccacataataccgaatgtaccgaaagaatacattcatagagttggc
aggacagctcgcgcaggtagaggtggtatggcagttagcctcataactccgaatgatatc
aaattattacacgcgattgaagacacaataggtactaaattaacagaatacaaagtagac
gacaaagaaattgttacaattttgacacaaatatcggtggcgaaacgggaagcggaaatt
agattagatgagactgatttctacgaaaagaaaatgattaataaacggaaaaaattaatc
ttggaaggcaaagatccggatgagatagaggaacttctagaggaacagaagaaaaaacgt
aaaaagccaaagaaaagaaaaaacgcggaacaaacaattgatataaaatga
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