Linepithema humile (Argentine ant): 105672370
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Entry
105672370 CDS
T04898
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105672370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105672370
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105672370
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
HECT type E3
105672370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
SmpB
Motif
Other DBs
NCBI-GeneID:
105672370
NCBI-ProteinID:
XP_012222683
LinkDB
All DBs
Position
8:11952690..11958036
Genome browser
AA seq
1068 aa
AA seq
DB search
MYSFEGDYRRKPQQNLSGASKRDERAVLLQHAQLERLKREQQRKKHNAAVKIQAYIRGFV
IRKLVCAQMRQEFDEAQQAAGRRNLNLEELVPYLNKLLYFYHHTLDANRLIWVLQHFLKH
QKEIKLKSINSSQWLWRLRWTLCMCMRYTTEMLPDSAYSLAIPLRVLEVFTAREDTERVL
RENSYRHLESIFVYLIQHKYFEQLRKLLDEKVPPMVEATSVARTPISKCLLDMIKRPVDL
ISHVDRKESFSTLVLRELCRNIFSPKMSDPIRMFIVPALAEFRDFPYAQLIDCINRLQLE
PTINLFYCVLSLDSSNQFVSCKFEDVLTNYLQVFASLSSTIVSLNSAWSVSEQQQCQQAD
NDSDNDTKASITDQEQIDVLQHCIEMLNEQQRVNIILSAIEHSHKDPSVLLQPLCRLCHH
LLMTSKLAVHKYKLLYMLAFKPVFLKHLWTSLLSVRQTSLFSSNTPTPLLQIISRGIALS
TEDTNRIVPLLAVFCSLFSLLIATLHDTEFFLEQTSTDQTSDNRQQHAMPFTITELTMLS
GQLKSVCLGLVALAFPDTRPTMREDYKNAVLGAVPVQSQHDTQIWTHLLKVTVSLLRQLH
TRDLRRQFCPEGHWIASNITIPFEKPQNFASRQRRLRGYVPFQTLRAFTREEFEEGPPLS
ATEVRTLTLLREIPFVVPFSKRVVVFQSLIFKDKSEQQNELAHFMHGPSIQISVRRNYLY
EDAFEKLSPENEPELRRKMRVQLVNSAGLEEAGVDGGGLFREFLSELLKTSFDPNRGFFK
LTKDNMLYPNPTVQLLVDDFAKHYYFIGRILGKAIYENLLVELPFAEFFLSKIVGRQSDV
DVHHLASLDPIMYRNLLYLKSYKGDVADLGLDFTVLTDELGERRIDELKPSGANIPVTNH
NRIEYIHLMADYKLNKQIRTQCNAFKGGIGSVVPLDWLQMFNNKELQVLIAGAQIPVDVN
DLKLHTNYTGGYTANHPTITAFWKVVSEFSDHQKGQLLKFVTSCSRPPLLGFKELDPPFC
IQHAGSVDRLPTSSTCMNLLKLPEFQDEKTLREKLLYAIQAGAGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctttgaaggggactataggcgtaagccacaacaaaatctgtcaggtgccagt
aagcgggacgagagagctgttcttttacaacatgcgcaactagagagattaaagagggaa
cagcagcgcaagaaacacaatgcggctgtaaagatacaggcatatatacgtggttttgtt
attagaaagctagtatgtgcacaaatgaggcaagagtttgatgaggcacaacaggcagca
ggacgtagaaatctgaatctggaagaactggtgccttatctaaataagttgttgtatttt
tatcatcatacgttggatgccaacagactaatatgggtcttacaacactttttgaagcac
cagaaggagatcaaattgaagtcgataaattcgtcgcaatggctatggagattgcgatgg
acgctttgtatgtgcatgcgatacaccacagaaatgttaccagacagtgcgtattcactg
gcaataccgttgcgagttctagaggtgttcactgcgcgcgaggacacggagagagtactg
cgcgagaatagttaccgacacttagaaagtatattcgtttacctgattcagcacaagtac
ttcgagcaattgagaaagctgctggacgagaaagtgccaccaatggtagaggcaacatcg
gtcgctcgcacgccgatctccaaatgtctgcttgacatgatcaaacgaccggtggatctg
atttctcatgtggatcgcaaggagagcttttccactcttgtgttgcgcgaactgtgcagg
aatatattttcgcctaaaatgtcggacccgattcgcatgtttatcgtgccggcgttggcg
gaattcagagactttccctatgctcagttgatcgattgcattaaccggctccagctggag
cctacgataaatctgttttactgcgttttatcgttagattcgtccaatcaatttgtatcg
tgcaaattcgaagatgtgctgacaaattacctgcaagtatttgcgtctctcagctcgact
attgtgtcgttgaacagcgcatggagcgtctcagagcagcaacaatgtcagcaggcagat
aacgactcagacaacgataccaaggctagtataactgatcaggaacagattgacgtcctg
cagcattgcatcgagatgctgaacgagcagcagcgtgtgaatatcatactatcggcgatc
gagcacagtcataaggatccctccgtgctgttgcaaccgttgtgcagactgtgtcatcat
ctactcatgaccagcaagttggccgtgcacaagtacaagctgctctacatgctcgctttt
aaaccggtgttcctcaagcatctgtggacgagtctgttgtcagttcgccaaacgtcgttg
ttcagcagcaacactcccacacccctgctgcagatcatatcgcgcgggattgcactctca
acggaggacaccaacaggatagtcccgctactggcggtgttttgttcattatttagcctg
ctgatcgcgacgctgcacgacaccgagttcttccttgaacaaacctccacagaccagacg
tccgataatcgacagcagcacgctatgccatttaccattaccgaattgacgatgctgtcc
ggccaactgaagagcgtctgcctaggtctggtggcactcgcattccctgacacccggccc
acaatgcgcgaagactacaagaatgccgtgctgggcgctgtacccgttcaatcccaacac
gacacgcaaatctggacgcatctgttaaaggtgacagtgagtcttctacgacaattacac
acgcgcgatctcaggcggcaattctgcccggaaggccactggatcgcatctaacatcacc
attccgttcgaaaaaccgcagaactttgcgtcgcgccaacgtagactccgcggatacgtc
ccttttcaaactctacgagcctttacacgggaggaatttgaggaaggaccgccgctatca
gcgacagaagtgcggacgctgactctactgcgcgagataccgttcgttgtaccgttcagc
aaacgcgttgtggtgtttcaatcgctgatcttcaaggacaagtcggagcagcagaacgaa
ctcgcacattttatgcacggtccgtcgatacagatatccgtaaggcgcaattatctatac
gaggacgcatttgagaagctctcaccggagaacgagcctgaattgcgacgtaagatgcga
gtacagttagtaaacagcgcaggtctagaggaagccggtgttgacggcggtggtcttttt
cgggaatttctatccgagttactcaaaaccagcttcgatcccaatcgtggtttcttcaag
cttaccaaggacaacatgttgtatccgaatcctacagtgcaattgctggttgacgatttc
gcgaagcattactatttcattggcagaatcctggggaaggccatctacgagaatttattg
gttgagctgccgttcgccgaattcttcctatcgaagatcgtcggccgtcagtcagatgta
gacgtgcaccatctagcctccctcgatcccatcatgtatcgcaatctgctctacttgaag
agctacaagggcgacgtggcggatctcggactcgattttactgtgctgaccgatgagctg
ggcgagcgccggatagatgagctgaagccgagcggcgccaacattcccgtgacgaatcac
aatcgcatcgagtatatccatttgatggctgattacaagctgaataagcaaatccgcacg
cagtgcaatgcgttcaagggcggtattggtagtgtggtaccgctcgattggctacagatg
ttcaataataaagagctgcaagtgctgatagcgggtgcgcagattcccgtggatgtaaac
gacctcaagctgcacacaaactataccggcgggtacacggccaatcatccgaccatcacc
gccttctggaaggtcgtcagcgagttcagtgatcaccagaagggccagctgttgaaattc
gtcaccagctgtagccgtcctcctctcctaggatttaaagaacttgatccaccgttctgc
atccagcacgctggcagtgtggaccgtttgccgacctcgagtacctgtatgaacttgctg
aagcttcccgagtttcaagacgaaaaaacactgcgcgaaaaacttttatacgcgatacag
gctggcgcaggcttcgagctcagttag
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