Linepithema humile (Argentine ant): 105672375
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Entry
105672375 CDS
T04898
Symbol
mys
Name
(RefSeq) integrin beta-PS isoform X1
KO
K05719
integrin beta 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04145
Phagosome
lhu04512
ECM-receptor interaction
lhu04820
Cytoskeleton in muscle cells
lhu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
105672375 (mys)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105672375 (mys)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105672375 (mys)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105672375 (mys)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105672375 (mys)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105672375 (mys)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhu04147
]
105672375 (mys)
04515 Cell adhesion molecules [BR:
lhu04515
]
105672375 (mys)
04090 CD molecules [BR:
lhu04090
]
105672375 (mys)
Membrane trafficking [BR:
lhu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105672375 (mys)
Exosome [BR:
lhu04147
]
Exosomal proteins
Proteins found in most exosomes
105672375 (mys)
Cell adhesion molecules [BR:
lhu04515
]
Integrins
Integrin beta subunits
105672375 (mys)
CD molecules [BR:
lhu04090
]
Proteins
105672375 (mys)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
105672375
NCBI-ProteinID:
XP_012222690
LinkDB
All DBs
Position
8:12004575..12010980
Genome browser
AA seq
849 aa
AA seq
DB search
MQTMFGSLRWLIISGVLVAGLLASFVQANYPPPERLTGMNPCISKQTCHECIQTPHCAWC
AAPKFPEKRCFLPNINTKIFATCPSEYTWNPDNVFSMLRHRNLTKGGYAIGGGGIGGGYG
SIESSYSNFSSSSSSSSHFHKESSSGSGSRRQEAVQMWPQEVNLKLRINEAYRMSFAYSQ
AEDYPVDLYYLMDLSKSMEDDKKKLSDLGQLLVESMSKITSNFRLGFGSFVDKVVMPYVN
TVPKSLIEPCDGCAAPYGYKNIMTLSQDTSKFAGLVRNASVSGNLDAPEGGFDAIMQAIV
CRNQIGWREKARRLLVFSTDAGFHYAGDGKLGGIIKPNDGLCHLDTSGLYTHSSLQDYPS
ISQINLKVKQNAINIIWAVTEEQINVYKRLTKHVEGSFAGKLSDDSSNVVELIREQYDAI
SSSVEMKDTASSAVKVKYFSSCLGTGPAIETSKCDGLKVGTKVEFIAEIEVTSCPANRSE
WKQKFDIYPVGINETLTVNLEMLCDCECEREGHMYEEKSSECNGVGTLKCGVCECYDGFF
GKRCECSPHQELTGFDKHFQSCRPDNASLVDCSGRGTCACGQCECEERENPEEIISGHFC
ECDNFSCDRDQGKLCSDHGTCECGQCVCNAGWTGPSCNCRSSNDSCIAPGTTNGILCSGH
GDCVCGECICHEEGNTRYSGKHCNKCPTCPSRCEELKPCVQCQMYGTGNYSDAEECARNC
KEFVPEGVETVIVDVDNDEVPCFGTDEDDCKYNFVYYYNETNCLQVRAQNERECPPQVYM
LGIVLGVIAAVVLIGLALLLLWKLLTTIHDRREFARFEKERMMAKWDTGENPIYKQATST
FKNPTYAGK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgatgttcggcagcttgagatggctgattatatcaggagtgttagtggcaggc
ctactagcctcattcgtccaagccaattatcctcctccggagagattaactggcatgaat
ccttgtatcagtaaacagacatgtcatgaatgcatacagacaccacattgcgcttggtgt
gcagccccaaaattccctgaaaaaaggtgctttcttccaaatatcaataccaagatattt
gcaacatgtccttccgaatatacatggaatccggacaatgtcttcagcatgctacgacat
cgtaacttgacaaagggtggttatgctattggtggtggtggaattggaggagggtatggc
agcattgaaagctcgtactccaacttttcatcttccagttcatcctcctcccattttcac
aaggagagttcaagtggaagtggaagcagaagacaggaggctgtgcagatgtggccgcag
gaagttaatctgaaactaagaataaacgaagcttacagaatgtcttttgcttactctcaa
gcggaagattatcccgtggatctgtactaccttatggatctgagcaagtccatggaggat
gataagaagaaattatccgacttgggacaattattggttgagagcatgagcaagatcacg
agcaatttccgtctgggtttcggtagttttgttgacaaagtcgtaatgccatatgtcaat
acagtgccaaaatctcttatcgaaccatgtgatggttgcgcggcgccttatggatacaaa
aacattatgacactttctcaagacacgagcaaatttgcgggacttgtgcgtaatgcatcc
gtgtctggcaacctggatgcgcctgagggtggtttcgatgcgattatgcaggcgatagtt
tgtcggaatcagataggttggcgcgagaaggcacgtcggctgctggtgttctcgacagac
gccggttttcattatgcaggcgatggcaagctgggcggcattatcaagccgaacgatggc
ttatgccacctggacaccagcggtctgtacacccattcatccctgcaggactacccaagc
atctcacagatcaacttgaaagtgaaacagaacgcaataaacatcatatgggcggtcacg
gaggagcagatcaacgtctacaaaagattgacgaaacacgtggagggctccttcgccggt
aaactgtccgacgattccagcaacgttgtggaattaattcgcgaacaatatgatgccatc
tctagctcggtggagatgaaggacactgccagcagcgcggtcaaggtgaaatatttctcg
agttgtttaggcaccggaccggcgatcgagacgtcgaaatgcgacggcttgaaagtcggc
acgaaggtcgaattcatcgcagagatcgaggtcaccagttgtccggccaacagatcagaa
tggaagcagaagtttgacatttatccagtcggtattaacgagactcttacggtgaatctg
gagatgctatgcgattgtgaatgcgaacgcgaaggccacatgtacgaagagaaatcgtcc
gagtgcaacggtgtaggcacgcttaaatgcggcgtttgtgaatgctacgacggattcttc
ggcaaacgctgcgagtgcagtccacaccaggagcttaccggctttgacaagcatttccaa
tcgtgccgacccgataacgcttcactcgtggactgctccggccgcggtacatgtgcctgc
ggtcagtgcgagtgtgaggaacgagaaaatccagaggagataatatcgggacatttctgc
gagtgcgacaacttttcttgtgaccgcgaccaaggcaagctttgctcggatcacggcact
tgtgaatgtggccagtgcgtctgcaacgccggttggactgggccgtcctgcaactgtaga
tcctctaatgattcctgcattgcgccgggaaccacaaatggtatcctctgctcgggccac
ggtgattgcgtttgcggagaatgcatctgtcacgaagaaggcaacacccgatactccggc
aagcactgcaacaaatgcccgacctgcccgagccgctgcgaggaattgaagccttgcgtg
cagtgtcagatgtacggcacgggtaattatagcgatgcggaggaatgcgcgagaaactgc
aaagagtttgtgccagagggtgtggaaacagtgatcgtcgatgtggacaacgacgaggtg
ccatgcttcggcaccgatgaagacgactgcaagtacaattttgtttactattacaacgag
accaactgcctccaggtgcgagcgcaaaacgagcgcgagtgcccaccgcaggtttatatg
ctcggaatcgtgttgggcgtgattgcggcagtggtcctgatcggactggcgttattactg
ctgtggaagctgctgacgaccatacacgacagacgggagtttgcacggttcgagaaagag
agaatgatggccaagtgggacacgggagagaatccgatctacaagcaagcgacttccacg
tttaagaatccaacatacgctggaaaataa
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