KEGG   Linepithema humile (Argentine ant): 105672586
Entry
105672586         CDS       T04898                                 
Symbol
mor
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105672586 (mor)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhu03021]
    105672586 (mor)
   03036 Chromosome and associated proteins [BR:lhu03036]
    105672586 (mor)
Transcription machinery [BR:lhu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     105672586 (mor)
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    105672586 (mor)
   PBAF complex
    105672586 (mor)
   GBAF(ncBAF) complex
    105672586 (mor)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM SWIRM-assoc_3 SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 BRCT_2
Other DBs
NCBI-GeneID: 105672586
NCBI-ProteinID: XP_012223047
LinkDB
Position
4:24134505..24141753
AA seq 1032 aa
MLSLGPKKDGSPNAKFFESPEILTQLDGVKQWLLKNCKKNVQTDPPTNKSLATLVVQLLQ
FQEDNLGKNVSKPPMTRIPMKCFLDFKSGGGLCHILATAYRFKQEQGWRRFDFPGGKSGS
RTDRTVDMLMAAERALIQNRCMTVPSVFVRPDVDKNTATKVKEMVRKHQGNVTENEADAT
HIIYPPVDPIEEEYARPCMRRERSVLLHWYYFPDSYDTWTPLDLPWDFPEGNPANTNSRS
VYKVSATWVLDLDQYNEWMNEEDYEVDDGGQKKVHKYRLSVEDFMAQPSHPPPAKKPKRK
RSPSPPPKIGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMEDPPAEPRIVE
VVATPTNPPITGQGNATTGNSTLASTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGG
QDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALAEFFNG
KNKSKSPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINY
QVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKLLLDLEKKPTGGTG
AIGTEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDD
WNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVA
FLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQS
GIAGTGPPEPPDDTTASAATTPSVLTGAANSPHSAGPTEAKKEEQEKSKDAMDVEPSQVD
VAKKEDEAKESEEDAKSTTDPEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQL
KAAEFRARQQAHQRLAQEQQQQQQQQQQQQQQQNQQHPPWQPPGAQQQQQQPPSPQAQAQ
PQPPSHTPPQQA
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgctgtcgttaggcccaaaaaaggacggcagccccaacgccaagttcttcgaatcaccg
gaaatactcacccagcttgatggtgttaagcagtggcttctgaagaactgtaaaaagaat
gtgcaaacagatccacctactaacaagagtttagctacattagtagtgcaacttctgcaa
tttcaggaagataatctaggcaagaatgtgtctaaaccacctatgactagaattccaatg
aaatgtttcttggattttaaatctggaggtggcttatgtcacatacttgcaacagcatat
cgttttaaacaggaacaaggatggcgaagattcgattttcccggaggaaaatcgggatct
cgcaccgatcgtacagtggacatgctaatggcagcagaacgcgctttaatacaaaacagg
tgtatgactgtgccaagtgtttttgtgagaccggatgtcgacaagaacacagctacaaaa
gtaaaagaaatggttagaaaacaccagggaaatgtcacagagaatgaagcagatgctaca
cacattatttatcctccagtggatccgatagaagaggaatatgcacgcccttgcatgaga
cgcgagagatcagttttacttcactggtattactttccagacagttatgatacatggacg
ccactggatcttccatgggattttcccgaaggaaatccggcaaatacaaattcaagatca
gtttacaaagtatcggccacatgggtattggacttggatcaatataacgaatggatgaat
gaggaagattacgaagtagacgatggcggtcagaagaaagtgcacaaatacaggctttct
gtagaagattttatggcacaaccgtctcatccgccgcccgcaaagaaacccaaacgaaaa
cgatcaccgagcccacccccgaagatcggcaaacgtaagagtagcagagcaccgtcgggt
attcaaagcgcatcgtccgcatcatcggcgacggcaccgaagaaatcgcgcggcggcgag
gaggaggaagatctgacccaaggaatggaggatccgcctgctgaaccccgcatcgtcgag
gtggtcgccacaccaacgaatccgccaatcacgggtcaaggcaatgcaacaacgggcaac
tccactttggcatccaccggtagcaaaaagcaagacagcgagcttcaaccactgaaatct
ggcaatttgaccgatctcgatgaacaaatggaaggagacaaggggagctctcaaggcggc
caagacagagaagagagagataccagtaaagaaagaggcgaaggtggcaaaggcgacgag
cctgaagacaacgtgacggagcaaacgcatcacattgtcgttcctagttattccgcttgg
ttcgattacaactctattcacaccatcgaaaagagagccttagcggaattcttcaatggc
aaaaataaatccaagtctcccgaaatttatcttgcatataggaattttatgattgacacc
tatcgactgaacccgacggaatacatcacgtcaaccgcttgcagacgaaatttggctgga
gatgtttgtgcaattatgcgtgtacacgcgtttctggaacaatgggggctcattaattat
caagtagacgcggaatcgagaccgacacccatggggcctccgccgacttcgcacttccat
gttctatccgacacgccgtccggcttggcgccggtcaatccgaatccgccgaagacaccg
caaccgtccgccgcgaagttgctgctggatctggagaagaagccgacgggtggaacgggt
gccataggcacggaggaaaaagcttcggcaggcgcgatggcgaacttcggcctgaagatc
gatcagtattcgaggaagccggctgtgctgaagaacaagcaagcagctggcgctacacgc
gactggacggagcaggaaacgcttttgctgttggagggactggagttgcacaaggacgat
tggaacaaagtatgcgaacacgtaggctcgagaacgcaagacgaatgtatcttgcacttc
ttacggctacccatagaagatccatatctggaagagggcggacccgaaggattgggaccg
ttagcttatcagccggtaccgttctcgaaggctggcaatcctgtcatgagcacagttgct
ttcctcgcatcggttgtggacccgagagttgctgcaagtgctgcaaaggccgccatggag
gagttcgcagcgataaaggaccaagtaccggccgcgttgctggatcagcatttaagaaac
gtgcaagctagcgctaattcggacggcaagttcgatccagctgctggcttggcgcagtcg
ggcatcgctggcacaggaccgcccgaaccgcccgatgacacaacggcatccgccgcgacg
actccttccgtattgacgggtgctgccaactctccccactcggcaggaccaactgaagcg
aagaaagaggaacaggagaaatctaaggacgcgatggacgtagaaccgtctcaggttgat
gtcgcgaagaaggaagacgaagcgaaagagagtgaagaagatgcaaagtcgaccactgat
cctgaagccatagaggcgaaagagaagaaggataaggttgtaagagacgctcagcttcag
tccgcagctgcagcagcgttagcagccgctgctgttaaagccaagcatttggcagcagtg
gaggaacgcaaaatcaaatcactggttgcgctactagtagaaacgcagatgaaaaagcta
gagatcaagttacgtcatttcgaggaactggaaaccacaatggagcgtgagcgcgagggt
ctcgaatatcagcgacagcagctgatcactgagcgacaacaatttcacttggaacagttg
aaggcggctgaatttagggcgcggcaacaagctcaccagcggctggctcaggagcagcag
cagcagcagcagcagcaacagcagcagcaacaacagcagaatcagcagcatccaccctgg
cagccgcctggcgcgcagcagcagcaacaacaaccgccaagtccgcaagctcaggcgcaa
ccgcaaccgccgtcgcatacgccgccgcaacaggcataa

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