Linepithema humile (Argentine ant): 105672586
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Entry
105672586 CDS
T04898
Symbol
mor
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105672586 (mor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105672586 (mor)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105672586 (mor)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105672586 (mor)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105672586 (mor)
PBAF complex
105672586 (mor)
GBAF(ncBAF) complex
105672586 (mor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105672586
NCBI-ProteinID:
XP_012223047
LinkDB
All DBs
Position
4:24134505..24141753
Genome browser
AA seq
1032 aa
AA seq
DB search
MLSLGPKKDGSPNAKFFESPEILTQLDGVKQWLLKNCKKNVQTDPPTNKSLATLVVQLLQ
FQEDNLGKNVSKPPMTRIPMKCFLDFKSGGGLCHILATAYRFKQEQGWRRFDFPGGKSGS
RTDRTVDMLMAAERALIQNRCMTVPSVFVRPDVDKNTATKVKEMVRKHQGNVTENEADAT
HIIYPPVDPIEEEYARPCMRRERSVLLHWYYFPDSYDTWTPLDLPWDFPEGNPANTNSRS
VYKVSATWVLDLDQYNEWMNEEDYEVDDGGQKKVHKYRLSVEDFMAQPSHPPPAKKPKRK
RSPSPPPKIGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMEDPPAEPRIVE
VVATPTNPPITGQGNATTGNSTLASTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGG
QDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALAEFFNG
KNKSKSPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINY
QVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKLLLDLEKKPTGGTG
AIGTEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDD
WNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVA
FLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQS
GIAGTGPPEPPDDTTASAATTPSVLTGAANSPHSAGPTEAKKEEQEKSKDAMDVEPSQVD
VAKKEDEAKESEEDAKSTTDPEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQL
KAAEFRARQQAHQRLAQEQQQQQQQQQQQQQQQNQQHPPWQPPGAQQQQQQPPSPQAQAQ
PQPPSHTPPQQA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttaggcccaaaaaaggacggcagccccaacgccaagttcttcgaatcaccg
gaaatactcacccagcttgatggtgttaagcagtggcttctgaagaactgtaaaaagaat
gtgcaaacagatccacctactaacaagagtttagctacattagtagtgcaacttctgcaa
tttcaggaagataatctaggcaagaatgtgtctaaaccacctatgactagaattccaatg
aaatgtttcttggattttaaatctggaggtggcttatgtcacatacttgcaacagcatat
cgttttaaacaggaacaaggatggcgaagattcgattttcccggaggaaaatcgggatct
cgcaccgatcgtacagtggacatgctaatggcagcagaacgcgctttaatacaaaacagg
tgtatgactgtgccaagtgtttttgtgagaccggatgtcgacaagaacacagctacaaaa
gtaaaagaaatggttagaaaacaccagggaaatgtcacagagaatgaagcagatgctaca
cacattatttatcctccagtggatccgatagaagaggaatatgcacgcccttgcatgaga
cgcgagagatcagttttacttcactggtattactttccagacagttatgatacatggacg
ccactggatcttccatgggattttcccgaaggaaatccggcaaatacaaattcaagatca
gtttacaaagtatcggccacatgggtattggacttggatcaatataacgaatggatgaat
gaggaagattacgaagtagacgatggcggtcagaagaaagtgcacaaatacaggctttct
gtagaagattttatggcacaaccgtctcatccgccgcccgcaaagaaacccaaacgaaaa
cgatcaccgagcccacccccgaagatcggcaaacgtaagagtagcagagcaccgtcgggt
attcaaagcgcatcgtccgcatcatcggcgacggcaccgaagaaatcgcgcggcggcgag
gaggaggaagatctgacccaaggaatggaggatccgcctgctgaaccccgcatcgtcgag
gtggtcgccacaccaacgaatccgccaatcacgggtcaaggcaatgcaacaacgggcaac
tccactttggcatccaccggtagcaaaaagcaagacagcgagcttcaaccactgaaatct
ggcaatttgaccgatctcgatgaacaaatggaaggagacaaggggagctctcaaggcggc
caagacagagaagagagagataccagtaaagaaagaggcgaaggtggcaaaggcgacgag
cctgaagacaacgtgacggagcaaacgcatcacattgtcgttcctagttattccgcttgg
ttcgattacaactctattcacaccatcgaaaagagagccttagcggaattcttcaatggc
aaaaataaatccaagtctcccgaaatttatcttgcatataggaattttatgattgacacc
tatcgactgaacccgacggaatacatcacgtcaaccgcttgcagacgaaatttggctgga
gatgtttgtgcaattatgcgtgtacacgcgtttctggaacaatgggggctcattaattat
caagtagacgcggaatcgagaccgacacccatggggcctccgccgacttcgcacttccat
gttctatccgacacgccgtccggcttggcgccggtcaatccgaatccgccgaagacaccg
caaccgtccgccgcgaagttgctgctggatctggagaagaagccgacgggtggaacgggt
gccataggcacggaggaaaaagcttcggcaggcgcgatggcgaacttcggcctgaagatc
gatcagtattcgaggaagccggctgtgctgaagaacaagcaagcagctggcgctacacgc
gactggacggagcaggaaacgcttttgctgttggagggactggagttgcacaaggacgat
tggaacaaagtatgcgaacacgtaggctcgagaacgcaagacgaatgtatcttgcacttc
ttacggctacccatagaagatccatatctggaagagggcggacccgaaggattgggaccg
ttagcttatcagccggtaccgttctcgaaggctggcaatcctgtcatgagcacagttgct
ttcctcgcatcggttgtggacccgagagttgctgcaagtgctgcaaaggccgccatggag
gagttcgcagcgataaaggaccaagtaccggccgcgttgctggatcagcatttaagaaac
gtgcaagctagcgctaattcggacggcaagttcgatccagctgctggcttggcgcagtcg
ggcatcgctggcacaggaccgcccgaaccgcccgatgacacaacggcatccgccgcgacg
actccttccgtattgacgggtgctgccaactctccccactcggcaggaccaactgaagcg
aagaaagaggaacaggagaaatctaaggacgcgatggacgtagaaccgtctcaggttgat
gtcgcgaagaaggaagacgaagcgaaagagagtgaagaagatgcaaagtcgaccactgat
cctgaagccatagaggcgaaagagaagaaggataaggttgtaagagacgctcagcttcag
tccgcagctgcagcagcgttagcagccgctgctgttaaagccaagcatttggcagcagtg
gaggaacgcaaaatcaaatcactggttgcgctactagtagaaacgcagatgaaaaagcta
gagatcaagttacgtcatttcgaggaactggaaaccacaatggagcgtgagcgcgagggt
ctcgaatatcagcgacagcagctgatcactgagcgacaacaatttcacttggaacagttg
aaggcggctgaatttagggcgcggcaacaagctcaccagcggctggctcaggagcagcag
cagcagcagcagcagcaacagcagcagcaacaacagcagaatcagcagcatccaccctgg
cagccgcctggcgcgcagcagcagcaacaacaaccgccaagtccgcaagctcaggcgcaa
ccgcaaccgccgtcgcatacgccgccgcaacaggcataa
DBGET
integrated database retrieval system