Linepithema humile (Argentine ant): 105672659
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Entry
105672659 CDS
T04898
Symbol
U3-55K
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105672659 (U3-55K)
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
Other 90S particles
105672659 (U3-55K)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
EIF3I
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
KNTC1_N
Cytochrom_D1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105672659
NCBI-ProteinID:
XP_012223162
LinkDB
All DBs
Position
4:complement(19227431..19230396)
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AA seq
470 aa
AA seq
DB search
MSFFIRNGGRGSGTKKRKFNGHLGKTFTTQSTSKQSKKTKKFVPDDDESIASTDEELAEE
NLRDDTYKYEDETDEEEETAQEKHLRLAKQHLKEIEEKEKNRVEFDESTVSKRLREEYLE
EKGRLRKTVAVCYVGHNELVTLKCKEHKTSITCICLSNDGHILYSGSKDGSLVKWSVKDK
VKLKAIKGNRGKTKDGMKSIRCLAISTDNKFLVVGDDGCKDIKIFSGDSLDHIKNLQGHR
DLVTGLVFRKGTHTLYSASEDRSVRVWNLDDMAYVESLFGHQNKITSIDALSRERAITSG
GYDGTIRIWKIVEESQLIFNGHNNGHSIDVVKLINEENFISGGEDGQLCVWGCLKKKPLC
SVVEAHGIDETNGQPMWISSIATLLNTDLVASGSRNGVVKLWQCGEGFRSLNLLFEVKLA
GFINSLAFTPDGNHLIAGVGTEHKNGRWWRIPEAKNATVIIPLIVSKQKT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttcataaggaatggtggccgaggaagtggaacgaaaaaacgcaaatttaat
ggccatcttggtaaaacatttacaactcaatctacatcaaagcaatcaaagaaaacaaag
aaatttgtacctgacgatgatgaaagtatcgctagtacagatgaggaactcgcagaagaa
aatttaagagatgacacatataaatatgaagatgaaactgacgaagaagaggaaactgca
caggaaaaacatttaaggcttgcaaaacagcatctgaaagaaattgaagaaaaagaaaaa
aatagggtagaatttgacgagagcacagtttcaaaaagattacgtgaagaatatttagaa
gaaaagggtcgattaaggaaaactgtagcagtatgttatgttggtcataatgagctagtt
acattgaaatgtaaagagcataaaacatctattacttgcatttgtctttccaatgatggc
catatattatattcgggatccaaggatggcagtttagtaaaatggtcagtaaaagataag
gttaaattaaaagctattaaaggaaatagagggaaaacaaaagatggaatgaaatctata
agatgtttagccattagcacagataacaaatttttggtagtaggagatgatgggtgtaaa
gatataaaaatattttctggcgatagcctcgatcatataaagaatttacaaggtcataga
gatcttgtgaccggattggtattccggaaaggtactcacacattatattccgcgtctgaa
gatagaagtgtaagagtttggaatttagatgatatggcttatgttgaatctttattcggg
catcaaaacaaaatcacatctattgatgcgctttcacgagagcgtgctatcacgagcggt
ggttatgacgggactattaggatatggaaaatagttgaagaatcgcaattgatatttaat
ggacataacaatggtcatagcatcgatgttgttaaacttataaatgaagaaaatttcatc
agtggtggagaggatggacaactctgcgtttggggatgtctgaagaagaagccattgtgt
tcagtagtagaggcgcatggaatagacgaaaccaatggtcaaccaatgtggatttcaagt
atcgcaacattgttgaatacagatttagtagcatcaggatcacgaaatggcgttgttaaa
ttgtggcaatgcggcgaaggctttagatctttaaatctcttgtttgaagttaaattagca
ggtttcataaattcgctcgcttttactcccgacggaaatcatctcattgccggtgtaggt
actgaacataaaaacggtagatggtggcgaataccagaagcaaagaatgctactgttatt
ataccattaatagtaagtaaacaaaaaacataa
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