Linepithema humile (Argentine ant): 105672939
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Entry
105672939 CDS
T04898
Symbol
Atg17
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105672939 (Atg17)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lhu01009
]
105672939 (Atg17)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105672939 (Atg17)
03029 Mitochondrial biogenesis [BR:
lhu03029
]
105672939 (Atg17)
Protein phosphatases and associated proteins [BR:
lhu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105672939 (Atg17)
Membrane trafficking [BR:
lhu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105672939 (Atg17)
Mitochondrial biogenesis [BR:
lhu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105672939 (Atg17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
DUF6664
Motif
Other DBs
NCBI-GeneID:
105672939
NCBI-ProteinID:
XP_012223640
LinkDB
All DBs
Position
6:22643911..22670571
Genome browser
AA seq
1463 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERDCGVVAAHQVLLMSGGECLEPTARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTVCARAHLA
QQCCGLAREQTKICERLVHDQHLQQQGWAAVVANLEDITQMFQSRAEQFQQAFVLYLAER
QQHMELLDNFSADLGTLAKIPILPALRAQAEGLLSLDDQPSHSSESASEDSGEVLSLLRW
ISAKDNQSSLEQVADQCSRGLEQFDERLMQALKAEVNTAIDNANKQEMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRATNLGDASVLPDLCTSHRRQLVVMLQNHNQLR
DIRRRCTKAKEELSVNIYQRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APQMYISAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNELPKLTVDDMESLRSQLPDLALAISTPNLNSITQFFLSKS
FTEGSTDDNKEKDATSASTDIPAKEQDRARVPMLSDRGGFESETDTEEFEKIGQAGVDAT
KPSVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTTRSSTSSEPGSFQFP
SLSVASERPAQLSPLTECVENGAADSSVCLLRSGASGLSNYRDVLPLEEQHSLSPNPPSL
TRSSVMCDGQHQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQHQA
IVSLLQENLGNTREEVERLRSILKTMKAVVREELTSVRNELAILRDQSNDGKSLTEMTER
VRVALSLYSQDCDSRLQEREQELTIEHEFKMADIKKLMQNHEEEICTLKRNLLEKETELA
EHERLVATMRQKLEDEQMEKRNLQSRLHQQLEDYSRILEQTRLDKEEAVKKTNDERFLEI
TSLTNSLAQCQKRIQELEENLATAHSDQERIVKETTDKFQMEYKTELETIRSRFKLMAAS
TMERSPSDSSLEKIERTDVIELVNHEAILAQAKEDMKVESAMALRTAIEKERADCMAKLD
NELRLAKEVVEEKNREIDLYRVRTAALMEQGKHYKNTIDRLIEEFEFKSDIQQILKEKMK
NLETDKARLESEESAERTVLEQNENIVYPIEAAACKDPSYDRLTASQVGLQEVFKDVDTD
KYDVEVSESKKVRLEAGDDDLTRLSRRLESLENDNKRLSCELKTIRASKVVAEAKVETLR
TDKIRLEIELLNERTKSIFGVESMPTESRDKEMNASVAIVTDLTSSRDQATSPEPSRRPS
SKSASTLIRLHPSFPAYINKKVAEKMDKMVQQGIASVTSCNAGDVVLVFWDAVHGNYAVY
QESSTLYFLHSDYVGALDIEMNPNSSRRCVLAEVIDKEYCHARKQENRYHVPRGTKFYRV
RAKPRDGRALIDETGSMSKSQLP
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgctttacatatttcacgttgataccggcaccaccatcactttcgacatcaagctggct
ttacaaagtgtcagtcagctgatggaggcgattgagagggactgtggcgtggtagcggct
catcaggtgctgctcatgagcggaggcgagtgcctggaaccgactgcacgcgtgtgttcc
tactcagctggaaccgacacgaatccgatctatctatttagcaaggccgccattgagagc
agcttaccgcccacaccgagtatagattacggttccgatgtcgacctccagactcagatc
gacgcctcactggctatgccagccacttatcaaaccgtttgtgctcgtgctcatttagct
caacaatgttgcggtctagcgcgagaacaaacaaagatctgcgagaggctggttcacgat
cagcatcttcaacaacaaggttgggcagcggtagttgcaaatctcgaggatatcacgcaa
atgtttcaatcccgagccgagcaatttcaacaggcctttgtcctgtacctcgccgaaagg
caacaacatatggagctccttgacaacttcagcgccgatctcggtaccctcgcaaaaatt
cctattctaccggccttacgagcgcaagctgagggcctgctgagtctggatgaccagcct
agtcattcgtccgagtccgcgtcggaggactccggggaagtgctaagcctacttcgatgg
atctcagcgaaggacaatcagagcagcctagagcaagtggcggatcagtgctcgcgcggc
ttggaacagtttgacgaacggttaatgcaggccctgaaggccgaagtaaacacggccatc
gacaacgctaacaagcaggagatgaaggagatcaagggtttgggcgagagattgttcgcc
ctggaacagttgatggtgcagaccaaaaggctcgttcacgagcaaggcgagctggctcag
ggtttcctacagaatcagaatcgtgctaccaatctgggtgacgcgagcgttctgcctgat
ctctgcacctcccatcgccgacagttggttgtcatgctgcagaatcacaatcagctgcgc
gacatccgtcgtagatgcaccaaggcgaaggaagagctctcggtgaatatctatcaacga
ctcaagtggatcatgtacgtagagaacaagatggtggaagtgggcaacaagctgatcata
tatcacgagagtctaaagcggttgaggaggcacctggaggtgcttcagcaaatccacttg
gctccacagatgtacataagcgcggtggtcgaggtggtcagaaggcgcactttctcacag
gcttttctcgtgtgggcgagtaacctcgcgtgtcagttgctgacggttcacagcgaggag
ctggcgcgtaggcgagaatttcagagcaaattcgacggccatttcctcaacacccttttc
cccggtctggaagacacgccgccgccgttcgcgacgcaggcgccttccgttttcgacaac
gaactacccaagctgaccgtggacgacatggaatcactgagatcacagcttccggatttg
gcgctcgcaatctccacgccaaatttgaatagcatcacacaatttttcttatccaagagc
ttcaccgaaggcagcaccgatgacaacaaggaaaaagacgccacgtcggcgagcactgac
attcccgcgaaggaacaagatcgggctagagtgccgatgttatccgacaggggtggcttc
gaatccgaaactgatacggaggagttcgagaagatcggtcaggccggcgtggacgcgact
aaacccagcgtgttcgacggggcgaaacaaaagcggcaaaagcaattggaggttggtgcc
tctcgaagcgtgtcccctgcttcctcgacctcaactaacgtctccccgctaaactcgaaa
gtcgcggatctaacaacgcgttcgtccacgtcaagcgaacccggctctttccaatttccc
agcctgtccgtcgcaagcgagcgcccggcgcagctgagtccgctgaccgaatgcgtggaa
aacggcgccgccgactcttccgtttgcttgctccgtagtggtgcgagcggcctctccaac
tatcgcgacgtcctgccgctcgaggagcagcattccctcagcccgaatcccccttccctg
acacggtcctccgtcatgtgcgacggccagcaccagcatcagcatccgttatccggtagc
ggcggtagcagtccctctgtcggcgtgggcgctaccgacttcatgggtaccgagttttac
atggacgagtccctacccagcagcctcagcgagcatcccgccgacggccagcatcaggct
atcgtatccctccttcaggagaatcttggtaacacgcgtgaagaggtggaaaggttgcgt
tccattctgaagactatgaaggcagtcgtacgcgaggaactgacttctgttcgaaacgaa
ttggcgattttgcgagatcagtccaacgatggtaagagcctcactgagatgacggagcgc
gtccgagtggcgttatctttgtactcgcaggattgtgatagtcgtttgcaagagcgcgaa
caagaactcacgattgaacacgagttcaagatggcagatattaagaaactaatgcagaat
cacgaagaagaaatatgcacgctgaaacgaaatcttttagaaaaagagacagaattggcg
gagcacgaacggttagtggccacaatgcgtcaaaagctggaggacgaacaaatggaaaag
agaaatttgcagagtcgtctacatcagcaacttgaggattactcaaggatattagagcaa
acgcgtttagacaaagaagaagctgtgaaaaagacgaatgacgagagattcctcgaaatc
acttccttgacgaattctctcgcgcaatgtcagaagcgaattcaagaactggaagagaat
ctggccactgctcacagtgatcaagaaagaatagtgaaagagacaactgacaagttccaa
atggaatataaaacagaattagaaactattaggagtcgtttcaagctaatggctgcttcc
accatggaaaggagtcccagcgattctagtctagaaaaaattgaacgaacggatgttatc
gagcttgtgaatcatgaggcgattctagcgcaagcaaaggaagatatgaaagtagaaagc
gccatggcacttcgtaccgctattgagaaagagagggctgattgcatggcgaaattggat
aacgaattaagattggcgaaagaagtggtcgaagagaagaacagagagatagatctgtac
agagtgagaacggctgcattgatggaacagggcaagcattacaagaacacaatagaccga
ttgatcgaagaatttgaattcaaatctgatatacagcaaatattgaaggaaaagatgaaa
aatcttgaaacggacaaagcacggctagagagtgaagaatctgcagagcgaacggtctta
gaacaaaacgaaaacattgtgtatcccatagaagctgcagcatgcaaggacccgagttac
gatcggttgactgccagtcaagtcggtttgcaggaagtcttcaaggatgtcgataccgac
aaatacgacgtcgaagtctcagaatcgaagaaagtacgattggaggctggtgacgacgat
ttgactcggctgtccaggcgacttgaatctctcgaaaacgataacaaaagattatcctgc
gagttaaagacgatacgcgcgagtaaagtagtggccgaagcgaaggtggagacattaagg
acggataagattcgtttggaaatcgagttgctgaacgaacgaaccaagagtatatttggc
gtcgagtcgatgcctacggaaagtcgcgacaaggaaatgaatgcatcggttgcgatagtt
acggacttaacttcaagtcgagaccaggctaccagtccagaaccgagtcgacgaccatct
tccaaatcagcttccacccttatacgcttgcacccttcttttcccgcctacataaataag
aaagtcgcggaaaagatggacaagatggtgcaacagggaattgccagtgtcaccagttgc
aatgcaggcgatgtagttctcgttttttgggatgcagtacacggcaactacgcggtgtat
caggaatcttcgactctttattttcttcattcagactatgtgggcgcactggacatagag
atgaacccgaacagttctcggaggtgcgttctcgcggaagtgatcgacaaagaatattgt
catgcaagaaagcaggaaaatcggtaccatgttccacgtggtacaaaattctacagagtg
cgcgctaaaccacgagatggacgcgcactgattgacgagacgggttcgatgtcgaaaagt
caactaccgtaa
DBGET
integrated database retrieval system
