Linepithema humile (Argentine ant): 105672969
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Entry
105672969 CDS
T04898
Symbol
sno
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105672969 (sno)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105672969 (sno)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105672969
NCBI-ProteinID:
XP_012223695
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Position
6:complement(22919922..22930984)
Genome browser
AA seq
1364 aa
AA seq
DB search
MATKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAGIASIKEEKPSTDLPTDSV
EKAQGALSVLNQKFGNKIPGGLVTKTATPGYEMVRVGGSQGNANAPGFVNANQLNQMNQL
TGGYGGFPSGLASLAGFNPAAFLQSGVDINALMGSFMGMSGMNMGVNPFVQLLNQSGMHP
ANWSGKSVPQMWMNAGDPTKMMQPNIPEEEEVDDEDMGVAETYADYMPTKLKLGRKHPDP
VVETASLSSVEPTDVWYKVSIPEESIRSGALSALQLESITYASQQHEHLLPDGTRAGFLI
GDGAGVGKGRTIAGIIFENYLKARKRAIWVSVSNDLKYDAERDLKDIGASKIEVHALNKF
KYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCGEDFDGLIIFDEC
HRAKNLCPTGSSKPTKTGLTVLEIQNKLPKARVVYASATGASEPRNMAYMVRLGMWGEGT
PFPEFNDFIAAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKDFTKIY
DHSVRLWVQAMQRFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKVKHAVAVAR
EAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPDRNRIQ
RLLGLEPPKLKLEDYDVDAGGSGGKRKPVRQAAQRASKKVRAWSSEEDEISDEDRNGAHS
SGSEFKLTGSESEDDHHTDEESNVSSDFNPFFSDSDSDTDPWDRRKKKGKKQKKPAKKRL
STQDKIQSMLVHKQSSNRNKRNGDTAVGGSMNSMDGGVPHNQAPPRDAIEKACSMKEQLL
LQIESLGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTEDGAIQYESRSEVDVPLET
LNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSADRAIQQFG
RTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSQFNIDN
KYGRAALEATMKTIMGYEAPLVPPPQDYRGDFFKDVADALVGVGLICNSENTPGVLTLDK
DYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIITQAKKTGRFDMGILDLGTSGENVHR
VKLYRFLRKHATGKAPTELHVVHVERGMSWAEATGKCSELTGSKEGFYLSHQIRNGKQTA
ILAIAVDGGKKKTESKKDQLYMVHRPNTGLQLRQESLGELEKKYKKVSADEAEPHWTQQY
EASVNTCSHAYWSGNCKNTTLGIDCEVGLRRRSYNVLAGSVLSVWSRVENVLAARSGHNS
KMQVVRLRTDEGLKIVGTLIPKSCMEALRQALSSDAENTEELAL
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaaaagtatgatgatggcgttagtgatgatactagtgggagtgactttgat
gatgaagaagatccagataaaattgaagtgcctggaggaggtaaagatcttgcaaccgct
gctggaattgcaagtatcaaggaggaaaaaccttccacagatttgccaacagattctgtg
gaaaaagcacaaggggcgttaagtgtattaaaccaaaaatttggcaataaaattcctggt
ggtttagtgactaaaacagcaacacctggttatgaaatggtgcgtgtaggaggctctcaa
ggcaatgcaaatgcaccaggctttgttaatgcaaatcaattgaatcaaatgaatcaatta
actggtggatatggcggttttccatctggtttagcttctcttgcaggattcaatcccgct
gcttttttgcaatcaggcgtggacataaacgctttgatgggtagcttcatgggtatgtct
ggaatgaacatgggagttaatccttttgttcagcttctaaatcaaagtggaatgcatcct
gctaattggtcaggtaagtctgtgccacagatgtggatgaatgcaggtgatccgaccaaa
atgatgcaaccaaatataccggaagaggaagaagtcgatgacgaagatatgggtgttgcc
gagacttatgctgattacatgccaacaaaattgaagcttgggcgaaagcatccggatcca
gttgttgaaacagcgtccttatccagcgtcgagccgacggatgtttggtacaaggtgtct
ataccagaggagtcaatacgatctggtgcgctctctgccctccaactggagtccatcaca
tacgcttctcaacagcacgaacacttgctgccggatggtactcgcgccggatttctgatc
ggtgatggtgcaggtgtcggcaaaggcagaactatagccggcataatattcgaaaactat
ttgaaagctcgaaaacgtgccatttgggtatcagtgtcgaacgatctcaaatatgacgcc
gagcgcgatttgaaagatataggtgcatccaaaatcgaagttcatgcattgaataaattc
aaatacgcgaaaatttcgtcagccgtgaacggcaacgtgaaaaaaggagtgatctttagc
acatattctgcattaattggtgaatcatcgcaaagtggcggaaaatacaaaagccggtta
aaacagttgttgcaatggtgcggcgaagatttcgatggtctgattattttcgatgagtgt
catcgggcgaaaaatctgtgccctactggaagttcaaaacctactaagacaggattaacg
gtcttggagatacaaaataagcttccgaaggctagagttgtatatgccagtgccaccggt
gcttctgaacctcgcaacatggcctacatggtacgacttggcatgtggggcgaaggtaca
cctttcccagaattcaacgattttatcgccgccgtggagaaacgtggtgtcggcgcaatg
gaaattgttgctatggatatgaagctgcgtggcatgtacattgctcggcaattaagtttc
cacggtgtggccttcaagattgaagaagtgcctctttccaaggatttcacgaagatttac
gatcattcagtgcgactgtgggtgcaagcgatgcaaaggttccaagaagcggcggaattg
atagatgcagaaaaccgcatgaagaagacaatgtggggccagttctggtcgtcgcatcaa
cgtttcttcaagtatctctgtatagccgcgaaagtgaagcacgcggtggctgtggctcgt
gaggcggtaaaatgcggcaaatgcgtggtgatcggtctgcaatccactggcgaagcgcgc
actctggagcaattggaacgcgatgacggtgaactcagtgactttgtttctaccgcaaag
ggtgttttgcaaacgttagtggaaaaacactttccggcgcccgatcgcaatcgtatccag
cgtcttctgggcttggaaccacctaagctcaagttagaggattacgatgtggatgctggt
ggttctgggggtaaaagaaaaccagttcggcaagctgcacaacgtgcgtcgaagaaagtg
cgcgcttggtcgtcggaagaggacgaaatatcagacgaagacagaaatggtgctcacagt
tccggctccgagtttaaattaactggcagcgaaagcgaggacgatcaccataccgacgaa
gagagtaacgtcagttccgattttaacccattctttagtgacagcgactctgacactgat
ccttgggacaggcgaaagaaaaaaggcaagaagcaaaagaaacccgcgaaaaagcgtttg
agtacacaggataagattcagtcgatgttggtacacaaacagtccagcaacagaaacaaa
cgcaacggcgacacagcagtcggcggatccatgaacagcatggacggcggtgtgcctcat
aatcaggcaccccctagggatgccattgaaaaagcttgtagcatgaaagagcagttgtta
ttgcaaatagaaagtcttggcgagcgattgccgccaaacacactagatcaattgatagac
gagctcggcggacccgagaacgtcgcggagatgacaggtagaaagggtcgcgtcgtgcaa
acggaagatggtgcaatacaatatgaatccaggtcagaggtggacgttcccttagaaacc
cttaacttgacggaaaaacagaggtttatggacggagagaaaaccgtagcgatcatctcc
gaggcggccagtagcggtatctcgttacagagcgacaggcgagcgaggaatcaaatgcga
cgtgtgcatatcacgctcgagttgccgtggagcgcggacagagcgatacagcagttcgga
cgaacgcatcgatcgaatcaggtgaacgcgccggagtatatatttcttatatcggatctg
gccggagaaaggcgattcgcttcgatcgtcgcgaagcgtctggagagcctgggcgcgtta
acgcacggtgatcgtcgtgcgacggaaactcgagatctctcgcagttcaatatcgacaac
aagtacggtcgcgcggcgctggaagcgacaatgaagaccataatgggatacgaagcgccg
ttggtgccgccgccgcaggactatcgcggtgatttcttcaaggacgtggccgatgcgctg
gtgggcgtcggtttgatttgcaacagcgagaatacaccgggcgtgctcactcttgataag
gattataataacatgtcaaaattcttgaatcgcatcctcggcatgccggtcgatttgcag
aatcgtctgttcaagtatttcaccgatacgctcaacgccattatcacgcaagccaaaaag
actggtcgcttcgacatgggtatccttgatctcggtacgtcgggagagaacgtccacaga
gtgaaactatatcggttcctgcggaagcacgcgacgggcaaggcgccgacggaactgcac
gtagttcatgtcgaacgcggtatgagctgggctgaagccacgggcaagtgctcagagctt
accggatccaaggagggcttctatttgagccaccagatccgtaatggcaagcagacggcc
attctcgcaatcgcagtggacggcggcaagaagaaaactgagagcaagaaggatcagctt
tatatggtgcacagacccaacacgggacttcagctacgacaggaaagcctaggtgaatta
gagaaaaaatacaagaaggtgagtgcggatgaggcggagccacactggacgcagcagtac
gaggcctccgtgaatacgtgttcgcacgcgtattggagcggcaattgtaaaaacactacc
ctcgggatagactgcgaagtggggctgagaagacgttcctataatgtattagccggttcg
gttctgagcgtttggagccgcgtggagaatgtgctcgctgcacgatcaggacataattct
aagatgcaggttgtacggttgcggacggacgaagggctgaagatcgtcggcacgcttatt
ccaaagtcttgcatggaagcgttgcgtcaagcactttcctctgacgcagagaacacggag
gaactggcgttgtaa
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