Linepithema humile (Argentine ant): 105673039 Help Entry 105673039         CDS       T04898                                  Symbol Vps39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism lhu  Linepithema humile (Argentine ant) Pathway lhu04140   Autophagy - animal lhu04142   Lysosome biogenesis lhu04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lhu00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     105673039 (Vps39)    04140 Autophagy - animal     105673039 (Vps39)    04148 Efferocytosis     105673039 (Vps39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lhu04131]     105673039 (Vps39) Membrane trafficking [BR:lhu04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     105673039 (Vps39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C VPS18_solenoid_2nd Clathrin TPR_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Zn-C2H2_12 B129_C2H2-zf Motif Other DBs NCBI-GeneID:  105673039 NCBI-ProteinID:  XP_012223795 LinkDB All DBs Position 5:complement(10401691..10405526) Genome browser AA seq 879 aa AA seqDB search MHDAYEETSILNITVQIESMAAYDDNLLIGTREGHLLMYNVPTVFDDSHKLELLRHSKNF NKKRINQIEVVPEYNLLIILTDNIVCIHDLNSPNFQQICQLPKTRGATLFTLDIQSTQSL TGERNTVVRLCVAVKRKLQLYYWKAKRFEEFNDFELTVQDIPRQLSWCGETLILGFRGLS YTIFDLSGKPKELFPTGKSPEPSITKLSDSSFVLGKDSQSFIMDTKGELVQHNSIKWSDT PNAIAWDEPYLLGIVHDKLEVYTLEGCLHIQTIKDLNKARLIYRCKQGKVFVASISQIWC IKAIDVTLQIRTLLEQNQFQLALKLTNLSDITDEEKAKQTYKIQTLYAHHLFYNKRFQEA MDLFLKLGTDPYEVIRLFPDLITPSTNTHELSEPAPSLPKLQDHDLEKGLRALIVFLTEV RHKLMAKDKDLNKEKNGVSGEKNLTVVATEQLLKIIDTTLLKCYLQTTDALVAPLLRLNH CHLAEAEKTLLMHQKYPELIILYQTKGQHKKALELLEKHAKENDSSLKGTERTIQYLQHL GKDHMDLILKFAGWVLTEDPEQGLRIFMEDIQEVEHLPRPKILDYLLRLHKDLVIQYLEH VVHVWEDNNPLFHNVLIHQYKEKCLASMNANATPAEKETSQHIRQKLQQFLEKSPYYTPE TILVHFPFDSLFEERAVILGRIGRHQQAISIYISLLNDIPRAIQYCQNVYTRYQNQDRAE KQKQTDNADEVYVLLIQQLLKPDNEGVLMAGCNPEIQRTAQPDLEMALRLLEEHASKINP MKALEVLPDSVPIGRIKHFLEVSLQNNLNARRRTQVLKGLLYAEHLQVQEQRMHYESQSV LMTEYNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRKG NT seq 2640 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgcttacgaggaaacatctatactaaatattacagtacaaatcgagtctatg gccgcttatgatgacaatttattaataggcacgagagaaggtcacttgcttatgtacaat gttccaacagtctttgatgatagtcacaagttggaattattacgccacagtaaaaatttt aacaagaaacggatcaatcagatagaagttgtgccagaatataatttattgattattcta acagataacattgtgtgcattcatgatttaaattcgccaaactttcaacaaatatgccaa ttaccaaagactcgtggcgctacgctatttactctggatattcagtcaactcagagtttg acaggagaaagaaatactgtagtacgtttatgcgttgctgttaaacgtaaattacagctg tattattggaaggcaaaacgatttgaggaatttaatgattttgaattaactgtacaggat atacctcgtcaattatcatggtgtggtgaaacattaatattaggatttcgtggattgtcc tacactatttttgatttaagtggtaaacctaaagaactttttcctactggtaaatctcca gaacctagtataaccaaattatcagacagttcttttgtattgggaaaagattcccaatca tttatcatggacacaaaaggagaactggttcagcataattctataaaatggtcagacacg cctaatgcaatagcatgggatgaaccttatttacttggtattgtgcatgataaattggag gtatatacgctagaaggatgtttacatattcagacgattaaggatctaaacaaagcaaga cttatatatcgatgcaaacaagggaaggtctttgtggcgtctattagtcagatttggtgt atcaaggcaattgatgttactttgcagattaggactctgctggagcaaaatcagtttcaa ttggcgttaaaattaactaatttgtcggacataacggatgaggagaaagccaaacagacg tataaaatacaaacgttatacgcgcatcatctgttctacaacaagcgattccaagaggca atggatctgtttttgaaattgggaactgatccatacgaagtaataagactgtttccagat ttgatcacaccgtcgaccaacacacatgaactcagcgaaccagcacctagcttgccaaag ttgcaagatcatgatttagaaaagggcttacgtgcattaatagtctttctaactgaagtt agacataaattaatggcaaaggacaaagatctaaataaagaaaagaatggagtaagtgga gaaaagaatttaacagtagtagctacggaacagcttctgaaaattatagataccaccctt ttaaagtgctatttgcagactaccgacgcgttggtggcgcctttacttagactgaatcat tgtcatttagcagaagccgaaaaaactttactgatgcatcagaagtatccagaactcatt atattgtatcaaaccaaaggacaacataagaaagcattggagctactggagaagcatgcg aaagaaaacgattctagtctgaaaggtactgagaggaccatacagtatttgcaacatctc ggcaaggatcatatggacctcattctgaagtttgctggatgggttttaaccgaagatcct gaacaagggcttagaatatttatggaagatatacaggaagtggaacatttacccagacca aagatattggattacctccttcgtttgcacaaagacttagtgatacaatatctggaacat gtggtgcacgtttgggaagataacaatccattatttcacaatgttttgatacatcagtac aaagagaaatgtctagcctctatgaatgcaaacgcaacaccggcggaaaaagaaacctcg caacatattcgacaaaagttgcaacaatttctggagaaatcgccgtattacacgccagaa acgatactagtgcatttcccgtttgacagtttgttcgaggaacgtgcggtcatactcggg cgaattggtcgccatcaacaagctatatcgatatatattagtctcttaaatgatataccg cgtgcaatacagtattgccaaaatgtatatacaaggtaccagaatcaagatcgtgcggag aaacaaaagcaaacggataatgctgacgaggtgtatgtcttgctaattcaacagttattg aaacctgataacgagggagttttaatggctggttgtaatccagagattcagagaacggca caaccagatttggaaatggctctgcgactgttggaagagcacgcttcaaagataaatcct atgaaagctctggaggttttgccagattccgttcctattggtagaataaaacattttttg gaagtcagtctgcagaataacttgaacgcaaggcggagaactcaggtcctcaaagggtta ctttacgcggaacatttacaagtgcaggaacaacgaatgcattacgagtcgcagagcgtt ctcatgacggaatacaatatatgtccagtttgtaagaaacggtttggcaaccaaagcgct tttgcgagatatcccaatggcgacatagtgcattactcgtgtcaagatcgcaaaggataa

DBGET integrated database retrieval system