Linepithema humile (Argentine ant): 105673247
Help
Entry
105673247 CDS
T04898
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105673247
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
105673247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
zf_CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
105673247
NCBI-ProteinID:
XP_012224176
LinkDB
All DBs
Position
6:complement(2015976..2026271)
Genome browser
AA seq
682 aa
AA seq
DB search
MTVAGKRYVDCTVLGAGSMPDAEDSSYDSDYEAEDSATTTTTTTTTTARRSRAESQLSST
AHPDVSRTTSDTLAAEFAEYVTIQGPSPTQNPGYTARVEFALKLGYTERLVQAALQKLGP
DPGQNELLAELIKLGAACSPKFSDGPEETDGALDADVGADEDGGTILVASTTANAISSTD
LRPVVVDGSNVAMSHGNKEVFSCRGIKICVDWFRARGHKEITVFVPKWRKEASRPDNPVV
DQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSNDNYRDLAQENP
EFRKVVEERILMYSFVNDRFMPPDDPLGRSGPTLENFLKIAPKKIDPAPPCPYAKKCTYG
NKCKFRHPERGPHPHKSVTERLVEHAQRHLQARGPSLSLPLPSTTTSVSPQHLPLCKARS
VAPPGVVQPLSSVSKSRSVENVTSDLSATSPAMYSQQMAPAQNPQGYHSVASWTAPRVSN
PEPEPANMHRKLQRQLTLNPVYDPRLYQLRRYHHHHQQQQQQPQQAGQPPQQQQQQSVIS
PPCSSMQHRPLTRRASNESSYLVTPMSWDHSDCLQHHQHVTRIASAPDSYRAWPPHNTAL
VPPSRVQRLGTSDPQLNLQPSSPSTSLHVPWGTQVQDVRRRLHYHLANIFPEEQVQTVMA
LHPHETDPQQICAAILAMFPKN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgctggaaagaggtatgtggactgcacagtgctgggtgcgggcagtatgccg
gacgccgaggattcctcgtacgacagcgattacgaagccgaggattcggcgacaacgacg
acgacgacgacgacgacgacggcgcggcgttcgcgtgccgagtcacagctatcttcaacg
gcgcatccggacgtgtctcgcaccacgtctgacaccctagcggctgagtttgcggaatat
gtcaccatccaaggaccgtcgcccacgcaaaacccaggttacaccgctcgcgtggaattc
gctctgaagctgggctacaccgagagactggtgcaggcagccttgcagaagctaggcccg
gaccccggccaaaacgagctgctggccgagctgatcaagctcggcgccgcttgctcgccg
aaattcagcgacggtcccgaagagaccgacggcgcgctggacgccgacgtcggcgccgac
gaggacggcgggacgatcctggtggcctcgacgacggcgaacgcaatttcgtcgacggat
ctgaggccggtcgtcgtcgacggcagcaatgtcgccatgagtcacggcaacaaggaagtg
ttctcctgccgcggcattaagatctgcgtcgactggttccgcgccaggggtcacaaggag
attaccgttttcgtgcccaaatggcgaaaggaggcctcccgaccggataacccggttgtg
gaccaggaaatcctgggggagctcgagagggaccgtttgctggtgttcacgccttccaga
ttggtaggcggaaaacgcatggtttgctacgacgaccggtacatcctgaaactggcggcg
gagatagacggcattgtcgtcagcaatgataattatcgagacttggcgcaagaaaatccc
gagttcagaaaggtcgtcgaggagagaatcttaatgtacagtttcgtcaatgatcgattt
atgccgccggacgatccgctcggtaggagcggacctaccttggaaaacttcctcaaaatc
gctcccaagaagatcgatccggcgcctccgtgtccttacgccaagaaatgtacatatgga
aacaagtgcaagttccggcatcccgagagaggcccgcatccacacaaatccgtgacggag
cgtctggtggaacacgctcagcgtcacttgcaagcacgtgggccgagcctgagtttgccg
ctgccatccacaaccacatccgtctctccgcaacatttgccgctctgcaaggccaggtcg
gtcgcgccaccgggcgtcgtccaacccttgtcgtccgtctcgaagagcagatcagtggaa
aatgtcacatctgacttgtccgcaactagtcctgctatgtatagtcagcagatggctccg
gcgcagaatccgcaaggctaccactctgtagcgagctggaccgcgccgagagtgagcaat
cccgagccagaaccggcgaacatgcatcgtaaactgcaacggcaattgactctgaatccg
gtgtacgatccgcgactttatcaactcaggcgataccatcatcatcatcagcagcagcaa
caacagccgcagcaagctggccagccgccgcaacagcagcaacagcagtccgtcatcagc
cctccgtgctccagtatgcagcatcgaccgttgacgagacgtgccagcaacgagtcatcg
tatctagttactcccatgagctgggaccactccgactgccttcagcatcatcagcacgtg
acacgcatcgcttccgccccggattcttacagagcgtggccgccacacaacactgccctg
gtgccgccgtcgcgggtgcagagactgggcacatcggatccccagctgaatctgcaaccg
tcgtcaccgtccactagcctgcacgtgccttggggcacgcaggttcaggatgtccgacgt
cgcctgcattatcatctcgccaacatcttccccgaggagcaggtgcaaactgtgatggcg
ctccatccgcacgagaccgatccccaacagatttgcgccgccattctggcgatgtttccc
aaaaattag
DBGET
integrated database retrieval system
