KEGG   Linepithema humile (Argentine ant): 105673270
Entry
105673270         CDS       T04898                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03030  DNA replication
lhu03410  Base excision repair
lhu03420  Nucleotide excision repair
lhu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105673270
   03410 Base excision repair
    105673270
   03420 Nucleotide excision repair
    105673270
   03430 Mismatch repair
    105673270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lhu03032]
    105673270
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105673270
Enzymes [BR:lhu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105673270
    6.5.1.6  DNA ligase (ATP or NAD+)
     105673270
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     105673270
DNA replication proteins [BR:lhu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    105673270
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     105673270
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     105673270
   NER (nucleotide excision repair)
    Other NER factors
     105673270
   MMR (mismatch excision repair)
    Other MMR factors
     105673270
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 105673270
NCBI-ProteinID: XP_012224215
LinkDB
Position
Unknown
AA seq 955 aa
MTQRRIDSFFTILSSKKENSSQDTLESNKADKQKDQVALGNGKRKRNKSSEFVSSPSKKS
DTKLKKPKTVSKTPSPIAKSHAKGATPKIKLDEASAKESKKAEKRKLKIRPNVQKKKEKD
AAVSKVEIAENTETENGKIKSKTEKKSTSSEIKSVFDETEKTKNVKKKRSRILQIVDSSD
DEDHLSLPESPQKTEDNDKETKIESLDKSNKKKKNDSDEEVDKNDSDEEVDRNGSNKKVD
KNSSDEEVNNVTSDNEEKSKSPKKESTPEKKSSKKMHSFFTSKQKDNAEDEKKGNTKSAN
QSYNPSASNYHPIDNACWKRGDKTPYSAFARTLELIEETSARLKIVEILSNYFRSVIVLS
PSDLLPSMYLCLNQLAPAYEGIELGVADTNLMKAIAQCTGRTLAQIKADVQEVGDLGLVA
EGSRSNQRTMFQPAPLTVPNMYSKLKEIAQMTGHASVTKKLDKIQTLFVACRNTEARYLI
RSLAGKLRIGLAEQSVLQALALACAMTPPEQEYPPEILNASKKMSNDRFKEKYDEIALIL
KTTYCECPNYNLIIPVLLEDGISALPSKCKLTPGIPLKPMLAHPTKGIQEVLTRFEGLKF
TCEWKYDGERAQIHVADNGQINIYSRNQENNTSKYPDIIKRFKNTCGDLVKNCVLDCEAV
AWDSEKKQILPFQILSTRKRKDANEEDIKVQVCVFMFDLLYLNDEPLVKEPFAKRRELLR
EHFKEVEGEWKFANSMDTTTMEEVQVFLDDSVKGNCEGLMVKTLEQDATYEIAKRSRNWL
KLKKDYLGGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFKEE
DLENHTKFFKDHVVPQAKSYYRFDSSHEPDHWFEPVQVWEIKCADLSLSPVHRAATGIVD
SEKGISLRFPRFIRIREDKNCEQATSAQQVADLYNNQEQIKNQTSKSKVTEEDFY
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgacgcaacgtcgtatagattcttttttcactatattatcgtccaagaaagagaattcg
agtcaggatacgttggagagtaacaaggctgacaagcagaaggatcaagttgcattagga
aatgggaaacggaagagaaacaagagcagtgaatttgtcagttctccttcaaagaaatct
gatactaaacttaagaagccaaaaacagtttccaagactccttctccaattgcaaagtct
catgcaaaaggagctactccaaaaataaagttggatgaagcttcagctaaagaatcaaaa
aaggcagaaaaaagaaaactgaagattcggcctaatgtacagaaaaagaaggaaaaagat
gcagcagtaagtaaagttgagatagcagaaaatactgaaacagaaaatggtaaaattaaa
agtaaaacagaaaagaaatctacatcttcagaaataaaatctgtatttgatgagacagaa
aaaacaaagaatgtaaagaagaagcgaagtaggatacttcagatagtagattccagcgat
gatgaggatcatttatcattaccagaaagcccccaaaaaactgaggataatgataaagag
acaaaaattgaaagcttagacaagtctaataaaaagaaaaagaatgattcagatgaggaa
gttgacaagaatgattcagatgaggaagtagacagaaatggttcaaataagaaagtggac
aagaatagttcagatgaggaagtaaacaatgttacttcggataatgaagagaaaagcaaa
agcccgaagaaggagtctacgcctgagaagaagtcatctaagaaaatgcacagctttttc
acgtctaagcaaaaagacaacgcagaggatgaaaaaaagggcaatacaaaaagcgccaac
cagtcttacaatcctagcgcatctaactatcatccgatagacaatgcatgttggaaacga
ggcgataaaactccgtatagcgcatttgcacgcactttggaactcatcgaggagacaagc
gcaaggctgaagatagtagaaatattatcgaattactttcggtctgttatagttctgagc
ccctcggatctcctgccaagcatgtatctgtgccttaatcaattagcgccggcatacgaa
ggaattgaacttggagtcgctgatacaaacttgatgaaggcgatagcgcagtgtaccggt
agaaccctggcgcaaattaaagccgatgttcaagaagtcggcgatttaggacttgtagcg
gaaggtagcagatctaatcagagaactatgtttcaaccggcgccactgacggttcccaac
atgtactctaagctaaaggagatcgctcaaatgacagggcacgcgtctgtaacgaagaag
ctggataaaattcagacgttgtttgtggcgtgccgtaataccgaggcgagatacctcatc
agatcgttagccggaaagcttcgcattggattggcagagcaatctgttttgcaagctttg
gctctggcttgtgctatgacaccaccagaacaagagtatccaccagagattctgaacgcg
agcaaaaaaatgtcgaacgaccgcttcaaggagaaatacgatgaaatagcgcttatactg
aaaacaacatattgtgaatgtccgaattacaacctcataattcctgttctactggaagat
ggaattagtgccttaccgagcaagtgtaaactcactcctggaatacctttgaaacctatg
ctggcgcatcctactaagggtattcaggaagttctgacgcgattcgagggtttgaaattc
acgtgcgagtggaaatatgacggagagagagcacagatacacgttgcggacaacggccag
atcaatatctacagcagaaatcaagagaacaataccagcaagtatccagatattatcaaa
cgttttaagaacacttgcggcgatctggtcaagaattgcgtactcgattgcgaggcggtc
gcctgggatagcgagaagaagcaaatcctaccgttccagatactcagcacgagaaagcga
aaggatgccaacgaagaggacatcaaagtgcaagtgtgcgtgttcatgttcgatctgttg
tatctaaacgacgagccgttggtgaaggaaccattcgcaaaacgtcgcgagttgttgaga
gagcactttaaggaagtggagggcgaatggaagttcgccaacagcatggatactacgacg
atggaagaggtgcaagtctttctggacgattctgtgaaaggaaattgcgaaggtctgatg
gtgaaaacattggagcaggacgcaacgtatgagatcgcgaagcgatcgagaaactggctg
aagttgaagaaggattatctgggcggcgtcggcgatacacttgacgtggttgtaatcggt
ggttacattgggaagggaaagaggaccggcacttacggtggcttcctcctggcttgttac
gatcaggaaaacgaggaatatcagagcatttgcaaaattggtacaggcttcaaggaagaa
gatcttgagaatcacactaaattcttcaaggatcatgtagtaccccaagctaaatcgtat
tatcgcttcgacagcagccacgagccagatcactggttcgagcctgttcaagtgtgggag
atcaagtgcgcagatctctccctttcgcccgttcacagagcggctactggaatagttgat
tcggagaagggaatatctttgagatttccacgatttatcaggattcgcgaggataagaac
tgcgaacaggccacctctgctcagcaagtagcggacttgtacaacaatcaagaacagatc
aagaatcaaacgtcgaaatcgaaagttacagaggaggatttctattaa

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