Linepithema humile (Argentine ant): 105673499
Help
Entry
105673499 CDS
T04898
Symbol
Polr1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105673499 (Polr1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105673499 (Polr1A)
Enzymes [BR:
lhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105673499 (Polr1A)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105673499 (Polr1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105673499
NCBI-ProteinID:
XP_012224577
LinkDB
All DBs
Position
7:complement(22269980..22277596)
Genome browser
AA seq
1700 aa
AA seq
DB search
MFSRYYRQRMSPKHQESQHLLFSVFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPSL
GPMKNSLEVCSTCGNNDHKCPGHFGHIELPVPVVNPLFHKGLSTLLKLSCLKCFTFQVPS
YVKLLLSAKLKLLYQGRLSDLDNLNQEVTSAVSNAQDAEGQTEYVREIIDTYMQNFFNRD
RFRTTPQDCEDQNNIKSIIVQWHMYVESILKQYVRSNKTGICMACDEALPKISTLQNKIM
INNKESPKEMLSREVAHKLETVMIMPDQSKEYLRELWKNEKDFLKLIVPCLDLVDIEYPT
DVFFFEVIPVLPPIVRPVNFAKGQMIEHPQTHVYKSIIQDCLVLKNVIQTIQDGGTDHLP
QEGRLVFEQIKGLTAMEKLHNAWQALQTNVDHLMDRDMNKTSESMNCQGLKQILEKKEGI
IRMHMMGKRVNFAARSVITPDPDLNIDEIGIPEAFARKLTYPTPVTPWNVVELRRLVTNG
PNVHPGAVLVENEDGTVQAISSDNFTKREAIAKRLLAASDRTSDSFVGIKVVHRHLQNGD
ILLLNRQPTLHKPSIMAHKARVLKREKTLHLHYANCKAYNADFDGDEMNLHAPQNELARS
ESYNIANVSNQYLVPKDGTPLSGLIQDYMVSGVRLTIRGKFFSRAHYTRLVYAALPIVQE
DIILLPPTIIKPKQLWSGKQVLSTVIINIIPSHVARINLISSTKISAKEWQVETPRRWKC
GTEFQNPVTMSEAEVIIRHGELLCGVLDKTHYGATPYGLIHCIFELYGSTHATNMLSAFG
KLFQAFLQSDGFTLGVEDILITGKVDEKRKEIISNCRKIGENIQKTIVKVGDDASVNEIK
DKIEESLRSNPKFRAQLDHKYKSTLDVFTNDINKTCLLTGLFKKFPDNNLQLMVQSGAKG
STVNTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPSPRAGGFIDGRFMTGIKPQEC
FFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLVINYDSTVRDSDGSLIQFYYGEDGL
DIPNSRFLKKEQMTFLVDNKDAIMDEKLLEFLKTDNKDIIKVTKKIKKWESKNNSSLKKR
RSSGFSIYSAENASQNTSAKRRSIDNHSGRSKAALSLMKKWIKEKEEVKEAFRAQCTRCP
DPIMSKYRQDIEFGVLSERIESLMDEYLSHSSRIKKSTLRDLLSIKVMKTICPPGEPVGL
LAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASRNMKTPSMEIPFHNGLE
NLEKQAKKLKVKLTKCVLHDVLKNISISRKMEEGAHRKLVHTLTIEYLPHKYYKGEFSVR
SQDVIKCTEKIFFNNIFKQIRKLAKASKLLLHFEGEKKRSNDDDIALDQADPDESVVEST
AKRSRMDLGEMHESSDEEDAAEDADATMTKSLSRHQENQEYEDPEEDVTEIMIKEEEEEA
DSNNNANGILKNKENDEDDDDDDDNDRRKKLNNKKNKFTSGKEFVLNAYEYATHYEYDEK
KFSWCKFTFWLPLKMIKLDLPTIIRNAAKDTVLWETPRIKKAFTFQNSKDETILKTDGLN
IVEMFKYDNILNLNKLYSNDIYNISETYGIEAANRVIIREVKDVFKMYGITVDSRHLSLI
ADYMTFDGIFQPLSRKGMENSASPLQQISFESSLTFLKNATLQGKKDDILSPSSRLMLGQ
PCKSGTGAFSLLPSLPLNNV
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtagatattatagacagcggatgtcaccaaagcatcaggagtcacagcattta
ctgttctcagtcttcacagcaaatgatataaggaatttaagcgtaacaaagataagaaca
ccattatcttttaacattcttggacatccattgaaaggtggattgtatgatccatcctta
ggtccgatgaaaaatagtttagaagtttgcagcacatgtggaaataatgatcacaagtgt
ccaggtcattttggacacatagaactaccagtgcctgttgtcaatccattatttcacaag
ggcctgtctacgttactcaaattgtcatgcttaaaatgtttcacttttcaagtaccatcg
tacgtcaagctgttattgtccgcaaaattaaaattgctttatcaaggaagactcagtgat
cttgataatttaaatcaagaagtgacatctgcagtatcaaatgctcaggatgcagaagga
caaacagagtatgttcgtgaaataattgacacttacatgcaaaacttctttaacagggac
agattcaggactacgcctcaggattgtgaggatcaaaacaacataaagagcatcattgtg
caatggcatatgtatgttgaaagcatacttaaacaatatgtcagaagcaacaaaacggga
atatgtatggcttgtgatgaggctctaccgaaaatttcaacactgcaaaataaaataatg
ataaacaacaaagagtctccgaaagaaatgctgtctcgtgaagtggcgcataaattggag
acagtaatgattatgcctgatcagtccaaggaatatctgcgagaattgtggaaaaatgag
aaggatttccttaagctaattgtaccctgcttagatttagtagacattgaatatcctact
gatgtattcttctttgaagtgatacccgtgctaccgccaatcgtgcgaccagtaaacttt
gctaaaggtcaaatgatcgagcatcctcaaacgcacgtctacaagagcatcatacaagac
tgccttgtcctgaaaaatgttatacaaacgattcaggacggaggcaccgatcacttgcct
caagagggtcgacttgtctttgaacaaataaaaggacttacagcgatggaaaagctgcat
aacgcttggcaagcattgcagaccaatgtggatcatctgatggatcgcgacatgaataag
acctcggaatctatgaattgtcagggcttgaagcaaattctcgagaagaaagaaggtatc
atcagaatgcacatgatgggcaaaagagtgaactttgccgcacgttcggttattacgcct
gatcctgacttgaacatcgatgaaattggcatccccgaagctttcgctcgcaaattaacg
tatcctacacctgtgacaccgtggaacgtcgttgaattgcgacgattagttacaaacgga
cccaatgttcatcccggcgcggttctggtggaaaatgaagacggaacggtgcaagcgatt
agtagtgacaattttacgaagagagaagctattgcgaaacgtcttttagcggcaagcgac
aggaccagcgactctttcgtcggcattaaagtggtacatcgacatcttcaaaacggcgac
atactgctgttgaacaggcaaccgacattgcacaaaccgagtataatggctcataaagca
cgtgttctcaagagagaaaaaacgttgcatctccattacgcgaactgcaaagcttacaat
gccgattttgacggcgacgaaatgaatttgcacgcgccacaaaacgaattagccagaagt
gaaagttataacatcgctaatgtatccaatcagtatctcgttccgaaggatggaactcct
ttaagtggccttatacaggattacatggtgtccggagtgcgattaacgatcaggggtaaa
ttcttttcaagagcgcattatacgcgattggtttacgccgcactgccgatagtgcaagag
gatataattctactaccaccgaccattatcaagccgaaacagctgtggtccggcaaacaa
gttctgtcaacggttatcatcaatataattccctcgcatgtagcacgaattaatttaatt
tccagcacgaagatcagcgcgaaggagtggcaagtggagacaccacggcgttggaagtgt
ggaacggaattccaaaatccggttactatgtcggaagccgaagttataatacgacacgga
gagctgctgtgcggagtgctggataaaacgcactacggcgcgactccttacggtctaatt
cattgtattttcgagttatacggcagcacgcacgccaccaatatgttaagcgcattcggc
aaactgttccaggcgtttctgcagtctgacggattcactctcggcgtcgaagatattcta
ataaccggcaaagtcgacgagaagcgcaaagagattatttctaattgtaggaaaatcgga
gaaaatatacaaaagactatcgtaaaggtgggggacgatgcatccgtgaatgaaattaag
gataaaatagaggaatctttacggagcaacccaaaatttcgcgcgcagctcgatcacaag
tacaagagcacgctggacgtttttacgaacgacatcaacaaaacgtgtctgttgacagga
ctcttcaaaaagtttccagataacaacttgcagcttatggtgcaatccggcgcgaaagga
tccacggttaacactatgcagatatcgtgtctgctcggacagagcgaattggaaggtaaa
agaccgccgttgatgattagtggaaaaagcttatcaagcttcccagcgtacgatccgtca
cccagagcaggcggtttcatcgacggcagatttatgaccggcatcaagccacaggaatgc
tttttccattgcatggcagggcgtgaaggtcttatcgatactgcggtgaaaaccagtcga
tctggttacttgcaaagatgtctcgtgaagcatctggaaggtttagttatcaattacgat
tcgacagtcagagattctgacggcagcttgattcaattttattacggagaggacggcctc
gacatacccaactcgcgtttcttaaaaaaggagcagatgacgttcttagttgacaacaaa
gacgccattatggatgaaaagttgttggaatttttgaaaacagataataaagacatcata
aaagtaacgaagaagatcaaaaagtgggaaagtaaaaataattcctccttgaaaaaaagg
aggagcagtgggttcagcatatactccgcggagaatgctagtcagaacactagtgcaaag
agaagaagcatcgataaccacagtggaagaagcaaggcagcgctatcgcttatgaaaaag
tggataaaagagaaggaggaagtgaaagaggcgtttcgagcacaatgcaccagatgtccc
gatccgataatgtccaagtacagacaagatattgaattcggcgtactgtcggaacgaata
gaaagcttaatggatgaatacctttcccattcgtcgagaataaaaaaatccaccttaaga
gatttattatccataaaagtcatgaagactatttgtccacctggtgaaccggttggtctt
ttagcagcgcaatctataggtgaaccgtccactcaaatgactttgaacacgttccatttt
gccggacgtggtgagatgaacgtgacgctgggtattcctagattacgcgagatcctgatg
ttggcatcgaggaatatgaagactccaagcatggaaatacccttccacaacggcctggag
aatctcgaaaagcaagcaaagaagctgaaagtaaaattgacgaaatgtgtcttgcacgac
gtgttgaaaaatatttcgataagtaggaaaatggaagaaggtgcacacaggaaattagtg
cacactctaacgatcgaatatcttcctcataaatattataaaggagagttttccgttcga
tcgcaggatgtgatcaaatgtacggaaaaaatctttttcaataatatatttaaacagatt
cgaaaacttgcgaaagcgagcaaacttttattgcatttcgaaggggagaaaaaacgatca
aacgatgacgacattgcgttggatcaagccgatcctgatgaatcagtagtggaaagtacc
gcaaaaagatcgcgaatggatttaggtgagatgcatgaatcatctgatgaggaagacgct
gcggaagatgctgatgcaacaatgacgaaatcactatcacgtcatcaagagaatcaagag
tacgaagatccggaagaagatgtgactgagattatgattaaagaagaagaagaagaagcg
gatagtaataataatgcaaatggaatcttaaagaacaaggaaaatgatgaagacgatgac
gacgacgacgataatgatagaaggaagaaattaaataacaaaaaaaataaatttactagt
ggaaaggagtttgtcttaaatgcgtacgaatatgccacgcattatgaatacgatgagaaa
aaattttcatggtgtaaatttacattctggttaccacttaaaatgatcaaattagatttg
ccaacaataatcagaaatgcagcgaaggatactgttttatgggagacaccgcgtatcaag
aaagccttcactttccaaaacagcaaagatgaaacaattcttaaaacagatggtttaaac
atagtggaaatgtttaagtatgataacatacttaatttaaacaaattatattccaatgac
atttataatatctctgaaacatatggaattgaagctgcaaacagagtcattataagagaa
gttaaagatgtttttaaaatgtacggcattaccgtcgattctagacatttatccttaatc
gcggattacatgacgtttgatggtatattccaaccactcagtagaaaaggaatggagaat
tctgcctcgccattacagcaaataagcttcgaaagttcgctaacttttttgaaaaatgcg
acattgcaaggaaaaaaggacgatatattatcaccctccagtaggctgatgttaggacaa
ccgtgcaaatctggtactggagcattctctctattgccatcgttgccattgaataatgtg
taa
DBGET
integrated database retrieval system
