Linepithema humile (Argentine ant): 105673508
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Entry
105673508 CDS
T04898
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105673508 (Caper)
Spliceosome [BR:
lhu03041
]
Common components
Common spliceosomal components
General mRNP proteins
105673508 (Caper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
Nup35_RRM_2
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
105673508
NCBI-ProteinID:
XP_012224610
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All DBs
Position
5:complement(21174091..21183246)
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AA seq
539 aa
AA seq
DB search
MRGVSESSPTRAMAEDLDVEAMLEAPYKKGEQDSSSKDKSSKENGSSRKSSGKSKHRSRS
RSRSRDRDRRDKDRRDRDRDRDRDRERDRDRGDRGDRGDRRRRSRSRDRRDRDRDRENDR
DRDRRDRDRDRDRRRKRSLTPLTLPRARPPFGKGHSPLGINDELTPEERDARTVFCMQLS
QRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGV
PIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQ
LIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLD
TDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMTQPQPPPQAAPPIAT
QCFMLSNMFDPQKIFVAVISSETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVY
VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgtttcagagagctcgccgactcgcgcgatggcggaggatttggatgtcgaa
gccatgctggaggcgccatataaaaagggggagcaggactcctcctccaaagacaagtcc
tccaaggagaatgggtctagccgaaaatcgtctgggaaaagcaaacatcgctcacgttct
cgttcaagatctcgggatcgcgatcgccgagacaaagatcgacgggatcgtgacagggac
agggatcgggaccgggaaagggatcgcgatcgcggcgatcgcggtgatcgcggtgatcgt
cggcgcagatcacgatcacgagacaggcgagatcgggacagagatcgtgagaatgatcgg
gacagggacaggcgggacagagatcgggatcgagatagaaggagaaagagatcgttgaca
ccgttgactcttcctagagctcgaccgccgttcggcaaaggtcacagtccccttggcata
aacgatgaattgactccagaagaaagagatgcccgaaccgttttttgtatgcaactaagt
caacgaattcgtgcgcgtgatttggaggaattcttctcgagcgtcggtaaagtgcaggat
gttagattaattacatgtaataagacacgaagattcaaaggcattgcctacgtggaattt
aaggatccagaaagtgtgacgcttgctcttggtttgtctggtcaaaaacttcttggagtg
cctattgtagtacagcatacacaagctgaaaagaatcggatgggaaactcgatgccaaat
ttaatgcctaaaggacagacgggtcctatgcgattatacgtcggatctttacattttaat
attacagaagatatgcttcgtggaatcttcgagccatttggaaagatagataacatacaa
ttaataatggatcctgagacgggccgtagcaaaggttatggattcttaacattcagaaat
gcggacgacgcgaagaaagcgttggagcaattgaatgggttcgagctcgccggtcgacct
atgaaagtcggaaacgtaacagaacgaaccgatctgattcaagggccatcactgcttgat
accgacgaattggatcgtagtggtatcgatcttggagcgactggcagattacaattgatg
ttcaaattggcggaaggtaccggcctggaaattcctcccgcagcagctaacgctttaaat
atggcaccagtcatgacacagccacagccaccacctcaagccgcgcctcccattgcgaca
cagtgctttatgttatcaaacatgtttgacccacaaaaaatttttgtcgctgttatttcc
agcgagacgaaccctaactgggcgaaggagatccgcgatgacgttattgaggagtgcaac
aaacacggcggcgtactacatgtgtatgtggaccaagcgtcgccgcagggcaacgtctac
gtgaagtgtccatcgatcgcgaccgcggtagcggccgtgaactcgttgcacgggcgatgg
ttcgccggccgcgttataactgccgcctacgtgccggtggtgaattaccactcgttgttc
ccggatgcgatgaccgcgttgcaactgctggtgccgagcgcgccgcgaagagggatgtga
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