KEGG   Linepithema humile (Argentine ant): 105673543
Entry
105673543         CDS       T04898                                 
Symbol
polybromo
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105673543 (polybromo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhu03021]
    105673543 (polybromo)
   03036 Chromosome and associated proteins [BR:lhu03036]
    105673543 (polybromo)
Transcription machinery [BR:lhu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     105673543 (polybromo)
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    105673543 (polybromo)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_WDHD1 HMG_box_2 Zap1_zf1 IF2_N
Other DBs
NCBI-GeneID: 105673543
NCBI-ProteinID: XP_067215758
LinkDB
Position
7:22611723..22625784
AA seq 1698 aa
MVNVKMWQNVSKVKRRIIKSKSIIEKRKSNESIIKNEKHLKKLTLKSRTEKYTTMNKRRR
TSSVASRGTEDDGDDIPPEPTKRRKKLDPSDLCQQLYDVLRNQKKEDGSLLCDAFIRVPK
RRQEPGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTSPEYKDA
TELWELCINTKNRIMEDYEDPEPKGKLILKVGRLARKATRQDDAEDTSESSTNLDEETMQ
LFEDLFAAVMTATDPTDNNRPLHIMFQLKPSKKLYPEYYDVIETPIDLKTIARKIQEGAY
SSIGDMEKDLMLMCRNACQFNEPGSQIYKDAKLLKKIITAAAKRQDSGFGCNTPKIATTA
PSTRSKRGSRTMAQSLIAQTAALLDEDEESDDEEEEPAETEEADNPQWQLFQTIRTAPNN
QGVRMSADFWKLPSKRFYPDYYKMIKNPISLLQIRTKIKRGEYGTVSEVAGDMNIMFENA
KKYNVHTSRLYKCAVKLQKIMQEKVQELLEFDQDSDSDSESENSSQQPKLIKRASNLLTR
GKYKDNIPLKKRLYALVKCVIEYVCEDGRQPMLMFMEKPSKKLYPDYYQVIAEPIDMLAI
EANIKAEKYQNENELIQDFKLMFNNCRQYNEEGSLIYEDANTLERVLMDKVKELGPLPDN
PKSKSTASTPTRNVGRPKKVVPLHVQKLRTLYDTIKDYHDAKGRQLSLIFMKLPNKNEYP
DYYEVIKQPIHMEKIASTLKNNGYENLDELVSDFILMFDNACKYNEPDSQIYKDALILQR
LVLQSKLQLSEDEESVPDVSAAIQELLATIFTALYNHQDEEGRCYSDSMAELPEHDIVDG
KKVRGLSLDLIKRRLDRGVYKRLDRFQEDVFTCLERARKLSRTDSQPFEDSVELQAFFLR
TRDEATRGGDLLHSPALNYTLLDLSTQVAELKRIKQQQELNLPNEDESCDGNETKDSETN
TNTDTNNSDNGGSMSFNQEVYRAGDFAYIEPTERGMEYSVVLIERLWTNGEGQQMLYGNL
FYRPSETYHVASRKFLDKELFKSDAKVAIPFAKVAGRCCVLSVKDYFRMQPEGFLEKDVY
VCESRYSTKARAFKKIKVWNFDADHLKLIPREKPLEPKRVISVYKERLEKHKEEIAELEE
GEKLLEKERPNVILYNPEDTENTYYEQYNTCVGSVKTGDFVYVATDGGRQQIAQIDAIWS
TKDGKCYFKGPWLLMPTEVPHTPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYIC
SRPTEIPEDDIYICESLYDESKNFIKKLNQEGLKKFNHSSTVTEDEIYFFRRPINPAKVS
SDVAQTQNQVKSVTPSSAQFEMEASPLLPKLEPDVLSMGVGLGVGVGEDSMDASGPPSVG
STEAQPVLSNTQTPVSTKKKTTGKKLVTGYILYSSKMRTQITQNNPESSFGEISRIVGNE
WRKLPAGEKQAWEERAIKMNEDGGQLKGTTTVGTNAIQDVVYECCWDNCDWQFEDMTDCI
DHCIAEQNGHVQSSFANAPSDVEYQCQWRGCGRTKKSIPPFPNVQRLARHVKEVHILKSH
GRIIPPSERSRNYMPSKGPTVLPPMETETSAAATQTSNLPAAKQPEPMFVAVPPRPSRVL
HSDAYLRYIEGLNVENRYISNWDKQMNANPDNTQIPDVTKLPAEWLGNGVGNHGNVVNAL
WTLRNMMMRDVLAINKTL
NT seq 5097 nt   +upstreamnt  +downstreamnt
atggtcaatgtaaaaatgtggcaaaatgtcagtaaagtgaaaagaagaataattaaaagt
aaatctataatcgaaaagagaaaatcaaacgaatctataataaaaaatgaaaagcattta
aagaaattgactttgaaatcaagaactgaaaaatacaccacgatgaacaagcgtcgtaga
acgtcgtcagtggcgagtcgcggcaccgaggacgacggcgacgatattccacctgaaccg
acgaaaaggaggaaaaaattagatcctagtgacttgtgccaacaattgtatgatgtactt
cgtaatcagaagaaggaagatggatcgttgctgtgtgatgctttcatccgtgtgcctaag
cggaggcaagaaccaggatattacgaagtcgtttctaatcctatcgatcttctgaaagtg
cagcaaaagctgaaaactgatgagtatcgtgatatggatgatcttgctgctgatattcag
cttatggtgaataatgcaaaagctttttatatgcgcacgtctcctgaatataaagatgca
actgagttgtgggagttgtgtataaatactaaaaatcgtatcatggaagattacgaagat
ccagaacccaagggaaagcttattctaaaagttggaagattggcgcgcaaagcgacgaga
caagatgatgcagaagatacttctgagagttctacaaatcttgatgaagaaactatgcag
ctatttgaagatttgtttgcagcagttatgacagcaactgatcctactgacaataacaga
ccccttcatatcatgtttcaacttaaaccatccaaaaagctctaccctgagtattacgat
gttattgagacgccaatcgatttaaaaactatcgcaagaaagattcaggagggtgcatat
agttcaatcggtgatatggaaaaagatttgatgctcatgtgtcgcaacgcttgtcagttt
aacgagcctggttcccaaatctacaaagatgccaaactcctgaagaagataattaccgcg
gccgcgaagagacaagacagtggatttggctgtaacacccctaagatcgccacgaccgcg
ccatcgacgagaagcaaaagaggtagtcgcactatggcgcaatcgttgatcgcgcaaact
gcggcattacttgacgaagatgaggagagtgacgatgaggaggaagaacccgctgagact
gaagaagctgataatccacagtggcaactatttcaaaccatccggacagctcctaataat
caaggtgtgcggatgagcgcagatttttggaagcttccatcaaagagattttatcctgat
tactataagatgattaagaatcctatatctttattacaaatacgtacaaaaattaagaga
ggcgaatatggtactgttagtgaagtagctggagatatgaatatcatgtttgaaaatgct
aagaaatataacgtacatacttctcgactgtacaagtgtgcagttaaattacaaaaaata
atgcaagagaaagtacaagaacttctagagtttgaccaggattccgattcggatagcgaa
tctgaaaatagctcgcaacagcctaaattaattaagcgtgcttcgaatctactgacacga
gggaaatacaaagacaatataccgctgaagaagagactgtacgcgttagtcaagtgtgtc
atagaatatgtttgtgaggacggtcggcagcctatgttgatgtttatggagaagccttcc
aagaaactgtatcctgattattaccaagtgatagcggagcccatagacatgctggcgatc
gaagccaatattaaagcagagaagtatcaaaatgagaacgaattgatacaagattttaag
ttgatgttcaataattgtcgccaatataatgaggaaggttcattgatttatgaggatgct
aatacattagagagagttttgatggataaggtgaaagaattgggacccttgccggataat
cccaagtcgaaatccaccgcgtcaacgccaactagaaacgttgggagaccgaaaaaagta
gtaccccttcacgtgcaaaaattgcgaactttatacgacacaattaaagactaccatgac
gcaaaagggagacaattgtctctgattttcatgaaattgccgaataaaaatgagtatcca
gattattatgaagtgataaagcagcctatacacatggaaaagatcgcgtccactttaaag
aataacggatacgagaatctggacgagctggtatccgattttatattaatgttcgacaac
gcttgcaagtataatgagccggactcacaaatatacaaggacgccttgatactacaaaga
ttagtgttgcaaagtaagctgcagctgagtgaggatgaggaaagtgttcccgacgtttca
gctgctattcaagagttactagcaacaatattcacagcgctttacaatcaccaggatgag
gagggcaggtgttactccgattctatggcagaacttccggagcatgatatcgttgatggc
aaaaaggtacgaggattgtcattggacttgattaaaagaagattggatagaggagtttat
aaaaggttagatcggttccaagaagacgttttcacctgcttggagagagcgcgaaagtta
tcgcgcacagattcacagccgttcgaagacagcgtggagcttcaagcgttttttctacgt
actcgcgatgaagctactcgcggaggggacttgctgcattcgccagcgttaaattataca
ctcctggatttgtcaacgcaggttgcggaactcaaaagaataaaacaacagcaggaattg
aatctgccaaatgaagatgagagctgcgacggaaatgagacaaaagactctgaaacaaac
accaatacagacacgaacaacagtgacaatggaggatctatgagtttcaaccaggaagtg
tacagagccggcgactttgcgtacatcgagcctactgaaaggggcatggaatatagtgtg
gttctcatagaaaggctttggactaacggagagggccaacaaatgctgtacgggaattta
ttttacagaccgagcgaaacgtatcacgtggcgtcgcggaagttcctggacaaggaactg
tttaagagtgacgccaaggtggcgataccatttgccaaagtagcaggcagatgttgtgtt
ctaagtgtaaaggattattttcgaatgcagccggaaggattcctcgagaaagatgtttac
gtatgcgaatcgcgttactccacgaaagccagagccttcaagaagatcaaagtttggaat
tttgatgcggatcacttgaaattaatcccgcgagagaagccgttggaaccgaagcgcgtg
atttctgtatataaagagcgattagagaaacacaaagaggaaatcgccgaattggaggaa
ggagagaaactgctggaaaaggaaagacctaatgtgatattgtataatccggaagatacg
gaaaatacatattacgagcagtacaatacgtgcgtgggatcggtgaaaacaggcgatttc
gtttatgtagcgacagatgggggcagacagcaaatagcacaaatcgatgctatatggtcg
accaaagatgggaaatgttatttcaaaggcccctggttgctaatgcctacagaagtgcca
catacacctacaaaattattttataagcaagaactgtttttatccaccgtagatggtact
catcccattgtagctattgttggaaagtgtgccgtccttgattacggagaatacatatgt
agcagaccgacggaaatcccagaggatgacatatacatttgcgagtcgctgtacgatgaa
agtaagaactttataaagaaactcaaccaggaaggtttaaagaagttcaaccattcgtcg
acggtgaccgaagacgagatctacttcttccgtaggcctatcaatcctgccaaagtttcg
agcgatgtggcacagacgcaaaatcaagtcaagtccgtcacgcccagctcggctcaattt
gaaatggaagcgtcaccattgttaccgaagctggaacccgatgtactaagcatgggggta
ggattaggagtaggagttggggaggacagcatggacgctagtggtccaccatccgtggga
tctacggaagctcaaccggtgctctccaatactcaaacacctgtgtcgactaagaagaaa
acgacgggtaagaaattagttacgggctatattttgtattcgagtaaaatgcgaacgcag
attacacaaaacaatcctgaatcgtccttcggagagattagcagaattgttggcaacgag
tggcgaaaactgccggcaggggagaagcaagcctgggaagagcgggcgatcaagatgaac
gaggacggcggccagctgaaagggaccactacggtgggcacaaacgccatacaggatgta
gtgtacgagtgctgttgggataactgcgactggcagttcgaggacatgaccgactgcatc
gatcattgcatcgcggagcaaaacggtcatgtacaatcgtcattcgcgaacgctcctagc
gatgtggaatatcagtgtcaatggcgtggctgcggtagaacgaagaaatccattccgccg
ttcccaaatgtacagagactcgcgagacacgtcaaagaagtgcacattctcaagtcccac
ggacgtataatacctccttccgaaagaagcagaaattatatgccttcaaagggaccgacg
gtattgccaccgatggaaacagaaacttcagcagccgcaactcaaacgagcaatttacct
gccgccaagcaaccagagccaatgtttgtcgcagtaccgccgagaccgagccgcgtattg
cattccgatgcctatttgaggtacatcgaaggattaaacgtagagaatcgttacatatca
aattgggataagcaaatgaacgccaatccggataatacacaaatccccgatgtaacaaag
ctgcccgccgagtggttgggcaacggcgtgggcaatcacgggaacgtcgtgaacgcatta
tggacactcagaaacatgatgatgcgggatgtgttggccatcaataaaactttatag

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