Linepithema humile (Argentine ant): 105673624
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Entry
105673624 CDS
T04898
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105673624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105673624
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105673624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ApeC
Motif
Other DBs
NCBI-GeneID:
105673624
NCBI-ProteinID:
XP_012224820
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All DBs
Position
7:22628824..22630638
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AA seq
281 aa
AA seq
DB search
MDLQYKTIHPVKYLQDHLEQGVRPDNRKFLSFRPVSINVSSIVQADSSAIFKLGDTTAVC
GIKAELAVPKSDTPDHGYIVPNVELSPLCSSKFRPGPPSEQAQVLSKLIDIILSNSTALD
LKDLCICKGNLVWVLYCDIVCLNYNGSVIDACTGAVIAALKTLKLPEVNYNKETKVTVVC
AENKIQLTVKTLPVSTSFALFENQLLIADPTDEEEDLSSGRFSIVMDDEEEICYIHKPGG
IPISTNLLFKALEMAKTRAKLIRSLIDAAISTLKVNMETDD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaatacaaaacaattcatcctgtaaaatatttacaggatcatcttgaacaa
ggtgttcgaccagacaacagaaaattcttatcatttcggccagtaagcataaatgtgtca
tcaattgttcaggcagacagttcagcaatattcaagttgggtgacacaactgcagtttgt
ggcattaaagctgaactagctgtaccaaaaagtgatactccagatcatggttacatagta
ccaaatgtggaattgtctcctctgtgttcctccaagtttcgtccaggcccaccgagcgaa
caggcacaggttctttctaaattgatagatatcatattgagcaattcaacagcgcttgat
ttgaaagatctgtgtatctgtaaaggaaacttagtatgggtcttatattgcgatattgtg
tgtttaaattacaatggttcagtcatagatgcttgcaccggagcagtaattgctgctctc
aaaacattgaaactacctgaagtgaattataacaaggaaacaaaagtcactgttgtatgt
gcagaaaataaaatacagctgactgtgaaaacgctaccagtatctacgtcgtttgcttta
tttgagaatcaattgttgatagctgatcctacagatgaggaggaagatttatcatcagga
agattctctatcgtgatggatgatgaggaagaaatttgttatatacataaacctggtgga
atcccaatctctaccaatttactttttaaggcattagaaatggcaaaaacgagagcaaag
ttaattagatcattaatcgatgctgctatatcaacactgaaagtaaatatggaaacagat
gattag
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