Linepithema humile (Argentine ant): 105673675
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Entry
105673675 CDS
T04898
Symbol
Chc
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04142
Lysosome
lhu04144
Endocytosis
lhu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105673675 (Chc)
04142 Lysosome
105673675 (Chc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105673675 (Chc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105673675 (Chc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhu04147
]
105673675 (Chc)
Membrane trafficking [BR:
lhu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
105673675 (Chc)
Exosome [BR:
lhu04147
]
Exosomal proteins
Proteins found in most exosomes
105673675 (Chc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
ANAPC3
Motif
Other DBs
NCBI-GeneID:
105673675
NCBI-ProteinID:
XP_012224895
LinkDB
All DBs
Position
2:complement(132017..141056)
Genome browser
AA seq
1676 aa
AA seq
DB search
MTQLLPIRFQEHLQLTAVGINASNVSFNTLTMESDKFICVREKVGDTAQVVIIDMNDSAN
PIRRPISADSAIMNPASKVIALKAMKTLQIFNIEMKSKMKAHTMTEDVVFWKWISLNTLA
LVTETAVYHWSMEGDSTPNKMFERHSSLNGCQIINYRTDPKQTWLLLIGISAQHNRVVGA
MQLYSVERKCSQPIEGHAASFAQFKMEGNAEASNLFCFAVRTVQGAKLHIIEVGQPPAGN
HPFPKKAVDVFFPPEAGNDFPVAMQVSSKYDVIYLITKYGYIHMYDIESATCIFMNRISG
ETIFVTAPHEASGGIIGVNRKGQVLSVSVDEENIIPYINGVLQNSELALRMAVRNNLSGA
EDLFVRKFNMLFQNGQYAEAAKVAANAPKGILRTPATIQRFQQVPTTQGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLVQGRKQLLEKWLKEDKLECSEELGDLVKQADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVSYTPDYIFLLRNVMRINPDQGVAFAQMLVQDD
EPLADINQIVDIFMEQNMVQQCTAFLLDALKNNRPSEGALQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLSPDWLVGFFGTLSV
EDSLECLKAMLTANIRQNLQICIQIATKYHEQLTTKALIDLFESFKSYEGLFYFLGSIVN
FSQDQEVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLSDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVRGQF
STDELVEEVEKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNPERFLKENQFY
DSRVVGKYCEKRDPHLACIAYERGQCDRELISVCNENSLFKSEARYLVRRRDPDLWAEVL
LESNPYKRPLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDSSVFSD
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAINNELYEEAFAIFKKFDVNTS
AIQVLIEQVGNLDRAYEFAERCNEPPVWSQLARAQLQQGLVKEAIDSFIKADDPSAYVDV
VETAHRTSHWEDLVRYLQMARKKARESFIESELIYAYARTNRLADLEEFISGPNHADIQK
IGDRCFDDKMYDAAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFAC
VDSGEFRLAQMCGLHIVVHADELEDLINYYQDRGHFEELINLLEAALGLERAHMGMFTEL
AILYSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLAMMQ
HPTEAWREGHFKDVITKVANVELYYKAIQFYVEYKPLLLNDILLVLAPRMDHTRSVAYFT
RTGHLQLVKPYLRSVQALNNKAINEALNGLLIDEEDYQGLRTSIDAFDNFDNIALAQQLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLFRDAMEYAAESRNSEVAQELLEWFLER
GSKDCFAACLFHCYDLLHPDVILELSWRHHILHFAMPYLIQVAREYITKVDKLEEAESRR
IEETDHQEHKPMIMPEPQLMLTAGPGMMAPGYAPQNVYGTPAQVYASTAAYQGYGM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctactacccataaggtttcaagaacatcttcagcttacagctgtggggatt
aacgccagcaatgtcagctttaatacacttacaatggaatctgacaaatttatttgtgtt
agagaaaaggtcggtgatactgctcaggtagtcattatcgatatgaatgactcggccaat
cctattagaagaccgatttctgctgattctgcaattatgaatccagctagtaaagtcatt
gctcttaaagctatgaaaacactgcaaattttcaacattgaaatgaaatcaaagatgaaa
gctcatacgatgacggaagatgtagtcttttggaaatggatatcgttgaacacattggca
ctggtaacggaaaccgcagtgtatcactggtccatggaaggcgattcgacaccgaataag
atgttcgaacgacattcatcgttgaacggctgtcagattatcaattatagaacagatcca
aagcaaacatggctattattgatcggtatttcggcgcaacataaccgagtagtcggtgct
atgcagctgtattcagtggaacggaaatgctcgcagccaattgaggggcacgccgcctct
tttgctcagttcaagatggagggaaacgcggaagcgagcaatctattttgttttgccgtt
agaacagttcaaggagcaaagcttcatattattgaagtcggtcaaccacccgcgggtaac
catccatttcctaaaaaagcggtggacgtgttctttccacccgaagccggaaatgatttt
cctgtcgcgatgcaagtcagctcgaaatacgatgtcatatatttaatcaccaaatatggt
tatatacatatgtatgatatcgagtctgcgacttgtatatttatgaatcgtatctcggga
gaaactatcttcgttaccgctccgcacgaagcttccggcggtataattggagtaaatcga
aagggccaagttttgtccgtatccgtggatgaggagaatataatcccctacatcaatggg
gtactgcagaattcagaattggcattaagaatggccgtgagaaacaacttgtcgggagcc
gaagacttgtttgtaagaaaattcaacatgctcttccaaaacggtcaatacgcggaggcg
gccaaggtcgcggctaacgctcccaaaggaatactcagaacgcccgcgacgattcaacga
tttcagcaagttccgactacccaaggtcaaacgtcacctcttctacagtactttggtatt
cttctggatcagggacagctgaacaagtacgaatcgttggaactatgtcgaccggtacta
gttcagggacgtaaacaactgttggagaagtggctgaaggaagacaagttggagtgcagc
gaggagctgggagatctggtgaagcaagcggatcctacgttagcgctcagtgtttacttg
agagccaacgttcctaataaggttatccaatgcttcgcggagaccggtcaattccagaag
attgttctctacgccaagaaagtctcgtatactcccgactatatatttctcttgcggaat
gtcatgaggattaatcccgatcagggtgtggcgttcgcacagatgctggtccaagacgac
gaaccattggccgatatcaatcagatcgtcgatatatttatggagcaaaacatggtgcag
caatgcacggcattcctactggatgcgctcaagaacaatcggccgagcgagggtgcctta
caaactcgcctcttggagatgaatttaatgtctgctccgcaagtggccgatgctatcttg
ggtaatcaaatgttcactcattacgacagggctcacgtcgcgcagctgtgcgagaaggct
ggcttattgcaacgtgcgctcgaacactacacggatttgtacgacattaaaagagcggtg
gtgcatacgcatttgctttcgcccgattggcttgtaggcttcttcgggacattgtccgtg
gaagattctctcgaatgtttgaaggccatgttgacggctaacataagacagaatttgcaa
atctgcatacaaatcgcgaccaaatatcacgaacaattgacgactaaagcgctgatagat
ttatttgagagtttcaagtcttacgaggggttgttttactttttgggatccatcgtgaat
ttcagccaggatcaggaggtgcatttcaagtatatccaggcggcgtgcaagaccggtcag
atcaaggaagtggagcgtatatgtcgagagagcaactgttacaatccggaacgcgtaaag
aattttttgaaagaggcgaagctatcggatcagttgcccttgataatcgtgtgcgaccga
tttgattttgtacacgatctcgttctctacctttatcgcaataacttgcagaaatatatc
gagatatacgtgcagaaggtaaatccatcgcgtctaccggtggtcgtgggtggtttgtta
gacgtcgactgctcggaggacatcattaagaatctgatactggtggtgcgcggacaattt
tccaccgacgaactggtcgaggaggttgagaagagaaaccggctgaaactcttgctgccg
tggttggaatctcgtgttcacgagggttgcgtagaacccgccactcacaacgcgttagcc
aagatttacatcgatagtaacaacaatcctgaaagatttctcaaagagaatcaattttac
gacagtagagtcgtcggcaagtattgcgagaagcgcgatccccatttggcttgcatcgcg
tacgaacgtggccagtgcgatcgcgagctgataagcgtgtgcaatgagaatagtctgttc
aagagtgaagctagatatttggtgagacgcagagaccctgatctttgggcggaagtactt
ttggagagcaatccgtacaagcgaccgttgatcgatcaagtggttcaaactgccctgtcc
gaaacgcaagatcctgaagatatatcggttaccgtcaaagctttcatgacggccgacttg
cccaacgaattgattgaacttctcgaaaaaatagtgctggacagcagtgtgttcagcgat
catcgtaatttgcaaaatctcttgatactgacagctatcaaagccgatcgtacgcgtgtc
atggagtatattaatcgcttggacaattacgatgctccggatatcgccaacatcgccatt
aacaatgagctctacgaggaagcttttgccattttcaagaagtttgacgtcaacacatca
gctattcaggttctgatcgaacaagtcggcaatttggatagagcttacgaatttgcagaa
agatgcaacgagccgccggtgtggtcgcaactcgccagggctcaattacagcagggtttg
gttaaagaagcgatcgacagttttatcaaagcggatgatccatcggcatacgtggatgta
gtagaaactgcacataggacttcacattgggaagatttagtccgctatctccaaatggct
cgtaaaaaagcacgcgaatcgtttatcgagagcgaattgatatatgcgtacgcgcgaacc
aatcggcttgcagatctcgaggaatttatatctggtcctaatcatgctgacatacaaaag
atcggcgatagatgcttcgatgataaaatgtacgacgctgcgaagctcctatacaacaat
gtatcaaactttgcgcgtttagctataacactggtccatctgaaagaatttcaaggtgcc
gttgatagcgcgcgaaaagccaactcgacgcgtacttggaaagaggtttgcttcgcttgc
gtagatagcggtgaatttcgattggcccaaatgtgcggcctgcacatagtcgtacacgct
gacgaactcgaagacttgatcaattactaccaagatcgtggacatttcgaggaactgatt
aatcttctggaagctgctttaggactcgaacgagctcatatgggaatgtttaccgagcta
gctattctctacagtaaatataagcctcaacgaatgagagagcatctggaactcttctgg
tcgcgtgtcaatataccgaaagtgctacgcgcggcggaacaagcgcatttgtgggccgaa
ttagtgtttctctatgataaatacgaggaatacgacaacgcagtcctcgcgatgatgcaa
catcctaccgaagcttggcgagaaggtcactttaaagatgttattactaaagtagcaaac
gtcgagctctattataaggctatacaattttacgtggagtataaaccccttttgctaaac
gatatattgctcgtgcttgctccacgtatggatcatactagatcagtggcatactttacg
agaaccggccatctacaactagtgaaaccatacttgagatcggttcaagctctcaataac
aaagctatcaatgaagcgttgaatggcttgctgattgatgaggaggattatcaaggtctc
cgaacatcaatcgatgcgttcgataattttgataatatcgcgttagcccaacaactcgag
aaacatgaattgatcgagtttagaagaattgccgcttacttgtacaagggaaataataga
tggaagcaatctgtggagctttgcaaaaaggatcgactattcagggatgctatggaatac
gcggcggaatcgcgaaattcagaagtcgcccaagaattgctcgagtggttcctggaaaga
ggctctaaagactgcttcgcagcatgtctatttcattgttacgatttacttcatccggat
gttatcttggagctttcatggagacatcacattttacatttcgcaatgccgtatcttata
caagttgcgcgggaatatattacaaaggttgataaattagaagaggccgaaagtcgacgc
atcgaagaaactgatcatcaagagcataagcctatgattatgccggaacctcagctaatg
ttgactgcaggaccaggaatgatggcaccaggctacgcacctcaaaacgtatacggtacg
cctgcacaagtgtacgcgtccaccgcagcctatcaaggttacggtatgtga
DBGET
integrated database retrieval system
