Linepithema humile (Argentine ant): 105673676
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Entry
105673676 CDS
T04898
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105673676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105673676
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105673676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD40_RFWD3
DUF6617
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105673676
NCBI-ProteinID:
XP_012224896
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Position
2:157800..161072
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AA seq
886 aa
AA seq
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MVQSRIYARNRALGYISNHIPLVTRYILRRKEHLIVTCVGKEFHTYGCKHFTLLSVSGMH
ADDITCLATDTFHVYTASANNIYAWRRGTELKHTYKGHDCTVHILLPFGAHLLSVDKSST
LKVWNIKDESLLLELNFSNNVFKITTLIHPNTYLNKILLGSEQGQLQLWNIKCMKMIYTF
KGWQTSVTALEQAPAIDVAAIGLNDGRIILHNLKYDETIFELVQDWGPVISISFRTDGHP
IMATGSFGGQIVFWNLEQRMVESQLCNAHEAAVTGLKYIPNEPLLVSSSSDNSLKLWIFD
MADGAGRLLRIREGHAEPPTITRFYGNDGNYLLTAGGDSSLRLFSTITEILNKSLGRASF
NRKASKKKGHSVADPLLMPPITELASEITREKEWCNIAATHSGLGVVTTWSSHLQKMGDL
KLLPERFKGNYNASATSLCLTRCGNFVVIGYNTGHVDRFNIQSGIHRASYGDESGAHKGP
IKGVMVDDLNQTLITAGRDATIKFWDFKPRKGITTARTILTLEESVEWIRHHNESSLVAI
ALENFDIVLMDVDTRRIVRHFQGHEGRVTDACFSPDSRWLITASMDCTIRTWDIPSSHLI
DIFQVPEACISLNFSPTGEFLATAHVRNVGIFLWSNRLLYSHVSLKAITKDDTIPEMGLP
GSSVEIEKGDEDDVIAAEPDYVSPDQLDDDLITMSAVAQSRWQNLLDIDIIKKRNKPKQP
PKTLEAAPFFLPTIPSLQLRFDFSDVKTTENTETHIHSALQSLTSFGKYLQSTTNDFSLV
IEKLKAMGPSDIDFEIQSLSLNESTAESLILQFMKMLHYMMERQTDFELSQAYLAVFLKW
HATAISKNKTLRNYLRKIQKAQTRNWLTLREKLFYNLSVVQNFKKM
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagtagaatatatgcacggaatcgtgctcttggatacatcagtaatcacata
cctttggtcacgagatacatccttagaagaaaagagcatctcattgtcacgtgtgtgggc
aaagaattccatacttatggatgtaaacatttcactctgctgagcgtgtcaggtatgcac
gccgacgatatcacttgtctggctacggacacgtttcacgtatacacggcgagcgcgaat
aatatttacgcgtggcgccgagggacagagttgaaacatacttacaagggccatgattgt
acggttcatattctgctaccatttggcgctcatttgctgtctgtcgacaaaagcagtact
ctgaaggtgtggaatatcaaggatgagagtttactgttggaattgaattttagcaataat
gttttcaagataaccacactgatacatcctaacacttacttgaataagattttgctgggt
agcgaacagggccagctgcagctgtggaatatcaaatgtatgaaaatgatctatacattc
aaaggatggcagaccagtgtgacagcgttggaacaagcacccgcaatagacgtggctgct
ataggcttgaacgatggccgcattattttgcataacctgaagtacgatgagaccatcttt
gaattagtgcaagactggggtccagtgatatccatcagctttcgtacagacggccatccg
attatggcaacaggcagttttggtggccaaattgttttctggaacctggaacaacgcatg
gtagagagtcagctgtgtaatgcgcacgaggcagcagtcacaggtctgaaatatatacct
aatgaaccactgcttgtttcatcctcctctgacaactctttaaagctatggatatttgat
atggctgatggagcgggcagactcttaaggataagagaaggtcatgccgagcctccgaca
attactcggttttacggaaacgatggtaattatctattgaccgcgggtggcgattcctct
ctccggttgttctccaccatcacagagatactgaacaaaagtctgggaagagcctcattt
aataggaaagcgtcgaaaaagaaaggtcattcagtcgccgatccattgttaatgccaccg
ataactgagcttgcatctgaaataacgcgagagaaggagtggtgtaacatagcggcaact
cattccggcttgggtgtagtcaccacatggtcctctcatctacaaaaaatgggcgatctt
aagttactgcctgagagatttaaaggcaactataacgccagcgcaaccagcttgtgctta
acaagatgcggaaattttgttgtgattggttataacacgggccacgttgatagatttaat
attcaatccgggatccacagagcatcctatggagatgagagcggcgctcacaaaggtccg
attaagggggtcatggttgacgatttgaatcaaactcttatcactgctggcagagacgct
acaatcaagttttgggattttaaacctagaaaaggtataacaacggcaagaacgatattg
acactggaagaatcggtcgaatggatacgacaccataatgagagttctctcgtggctata
gctttagaaaatttcgatattgtattgatggatgtggatacaagaagaatagttcggcac
tttcaagggcacgagggacgagtaacggacgcatgtttcagtcctgactctaggtggtta
atcacagcatctatggattgcacgatacgcacttgggacataccatcttcgcatttaata
gatatctttcaggtccctgaagcttgtatatccttaaacttttctccgacgggagaattt
ctcgcgaccgcgcatgtacgcaatgtaggaatcttcttatggtcgaatcgtttgctctac
tcgcacgtttcattaaaggccattactaaagacgacacgatacccgaaatgggacttcct
ggctcttctgtagaaatcgagaaaggtgacgaggacgatgttattgccgcagagccagat
tatgtgtctcccgatcagcttgatgatgatctcattaccatgtccgccgtggctcaatcg
agatggcaaaatctgctcgacattgacatcattaaaaagagaaacaaaccgaaacagccg
cccaaaactctcgaggccgcgccgttcttcttacccacaattccgtcattgcaactgcgt
tttgatttctcggatgttaaaactaccgagaacactgaaacgcatattcattccgcctta
caaagtcttacgtcattcggcaaatatctgcaatctacaactaatgatttttcgctcgta
attgaaaaattaaaggcgatgggccctagtgacatcgatttcgagattcaatcgttgtct
ttgaacgagagtacagccgagtcgttgatactgcagtttatgaagatgcttcattacatg
atggaacgacaaacggatttcgaattatcgcaagcatacctggcagtatttctaaagtgg
catgctacagcaatatcgaaaaacaagacgctacgaaattacctgcgaaaaatccaaaag
gcacaaacaagaaattggcttacgttacgagagaaattattttataatctaagtgttgta
caaaatttcaaaaaaatgtaa
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