KEGG   Linepithema humile (Argentine ant): 105673781
Entry
105673781         CDS       T04898                                 
Symbol
Syx1A
Name
(RefSeq) syntaxin-1A isoform X4
  KO
K04560  syntaxin 1A
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    105673781 (Syx1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lhu04131]
    105673781 (Syx1A)
Membrane trafficking [BR:lhu04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    105673781 (Syx1A)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 PoNi_N Spectrin_Anc-1_2 Lzipper-MIP1 Vac_Fusion PhrC_PhrF ETRAMP Spectrin_Anc-1 SBP_bac_4HB DUF6584
Other DBs
NCBI-GeneID: 105673781
NCBI-ProteinID: XP_012225089
LinkDB
Position
5:21402541..21471915
AA seq 293 aa
MTKDRLAALVAAQSDDDDVADDVSVNVGAPDDFMTEFFAEVEEIREMIDRIQTNVEDVKK
KHSAILSAPQTDEKVKLELEDLMSDIKKTANKVRAKLKVIEQNIEQEEHTNKSSADLRIR
KTQHSTLSRKFVEVMTEYNRTQTDYRERCKGRIQRQLEITGRTTTNEELEEMLEQGNPAV
FTQGIIMETQQAKQTLADIEARHADIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYH
VEHAVDYVQTATQDTKKALKYQSKARRKKIMIMICLAVLGVVVATTIGGYFGL
NT seq 882 nt   +upstreamnt  +downstreamnt
atgaccaaggatagattagcagccctcgtcgcggcccagtcggacgacgacgatgtggcg
gacgatgtgtccgtcaacgtcggggcgccggatgatttcatgacagagtttttcgcggag
gtggaggaaatccgcgaaatgatagataggatccagacgaacgtggaggatgtgaagaaa
aagcacagcgccattctctctgcgccgcagaccgacgagaaggtgaaactggaactcgaa
gacctgatgtccgacatcaagaaaactgctaacaaagtgagggctaagttaaaggtgata
gagcagaacatcgagcaggaggagcacacgaacaaatcgtcggcggatctgaggatacgc
aagactcaacactcgacgttgtccaggaagttcgtcgaagtgatgacggaatacaatcgg
acacagaccgattacagggagcggtgtaaggggagaatacaacgacagctcgaaatcacg
gggagaacgaccactaatgaggagctcgaggagatgctggagcaaggaaatccagccgtc
ttcacgcaagggatcatcatggaaacgcaacaagcaaaacagacccttgcggacatcgag
gcgcgtcacgctgacatcattaaactcgaaaactccatcagggagctacacgacatgttt
atggacatggctatgttggtggagagtcagggcgagatgatagatcgcatagagtaccac
gtggaacacgcggtggattacgtgcagacggccacgcaggacaccaaaaaagcactcaag
tatcaaagcaaagcccgacggaagaagatcatgatcatgatttgcctcgccgtattgggc
gttgtcgtcgccaccaccatcggtggatacttcggactgtga

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