Linepithema humile (Argentine ant): 105673810 Help Entry 105673810         CDS       T04898                                  Symbol Sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism lhu  Linepithema humile (Argentine ant) Pathway lhu03040   Spliceosome Brite KEGG Orthology (KO) [BR:lhu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105673810 (Sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lhu03021]     105673810 (Sf3b3)    03041 Spliceosome [BR:lhu03041]     105673810 (Sf3b3)    03036 Chromosome and associated proteins [BR:lhu03036]     105673810 (Sf3b3) Transcription machinery [BR:lhu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      105673810 (Sf3b3) Spliceosome [BR:lhu03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     105673810 (Sf3b3)  Complex B     105673810 (Sf3b3)  Complex C    U2 SnRNP specific factors     105673810 (Sf3b3) Chromosome and associated proteins [BR:lhu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      105673810 (Sf3b3)     TFTC complex      105673810 (Sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_VPS8 Motif Other DBs NCBI-GeneID:  105673810 NCBI-ProteinID:  XP_012225143 LinkDB All DBs Position 8:complement(11876937..11885593) Genome browser AA seq 1217 aa AA seqDB search MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDTDNSEDSAPQQ SSLYLNIGLQNGVLLRMVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP LEYTPRKFAIHNDSAHLVVIETEHNAYTEETKQQRRLQMAEEMQEAAGADEAAVARELAE AFLSEEPNEAVFGAPRAGPGLWASMLRIMAPTTGQTYEVHRFEQNLAALCLCLVKFANQG DQLFLIVGVAKEFQLNPRVSNGGSLYTYKVNADCTSIELLHKSPLDEVPLAICPYQGRVL VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKALWDRG LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKSISGDLERT PSEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtatttgtacaatttgacgctccaacgtgctacgggcatcacgcacgcggtacacggc aatttctctggcagtaaaatgcaagagattcttgtgtctcgtggcaaatcattggagtta ttacgaccagatccaaatacaggaaaggttcacactttgttgactgttgaagtttttggc attgtgagatcactcatggcgtttagactcactggtggaacaaaagattatattgtagtc ggatcggattccggtcgtattgtgattttggaatatatctctgctaagaatatctttgaa aaagtacatcaggaaacttttggcaagagtggatgtagacgtattgttcctggtcaatat cttgctatcgatccaaaaggaagagctgttatgataggtgctatagagaaacaaaagctc gtatatatcctgaatagagatgccgaggctcgtctgacaatttcttctccgttggaggca cacaagagtaacacgctagtatatcacacagttggtgtcgatgttggttttgagaatcct atgtttgcatgtttggaaattgattacgaggaggccgacagcgatcctacaggcgatgcg gcggtgaaaacacagcaaaccctgacgttatatgagcttgatctcggcttaaatcacgtg gtgcgaaaatacagtgaaccactggaagaacacgccaactttctcgtgtctgttcccggt ggcaacgatggtccaagtggcgttctcatctgctccgagaactatctcacatacaagaat ctcggtgatcagcatgacatccgttgtccaatcccgcgtcgccgtaatgacttggatgat cccgagagaggaatgatatttgtgtgctcagccacacacaaaacgaagagcatgttcttc ttcttggcgcaaactgaacaaggcgatattttcaagatcactttggagactgatgaggac atggttaccgagatcaaattaaagtactttgacacggtacctgtagcggcgagtatgtgc gtcctgaaaacggggttcctgtttgtcgcctcggaattcggcaaccattacctgtatcaa atagctcatcttggcgatgacgatgacgaacccgagttcagctcagcgatgccgctggag gaaggcgacactttcttctttgcaccgcgaccgctcagaaatcttgtattggttgacgaa atggacagcctgtcacccataatggcttgccaggtagcagatttggcaaacgaagacacg ccgcaattatatattgcttgcggtcgaggaccgcgatccaccctacgggtgttacgccac ggtctcgaagtttccgagatggccgtgagcgaactgcccggtaatccgaacgctgtatgg actgtgaaaagaagagttgatgaggaatatgatgcatacatcatagtgtccttcgtgaat gccacactcgtactcagtatcggcgagactgtcgaggaagtgacggactcgggttttctc ggtacaacaccgaccttgagttgctccgctttgggcgaggatgcgttggtgcaggtttat cccgatggtatacgtcacattcgagcggataagcgagtcaacgagtggaaagcgcctggc aaaaaaaccatcgtcaagtgcgcagtcaatcaacgtcaagttgtgatcgccctcacagga ggagaactcgtctacttcgaaatggatcctactgggcaactgaatgagtacacggagaga aagaagatgccatcggaagtgatgtgtatggctctcggaaatgtagctgtgggcgagcaa cgctcgtggttcttggccgttggcttgcaggacaacacagtgaggataatatcgttggat ccgtcggactgtctagcgccgagaagtatgcaagcgctaccagcagccgccgaaagtctg tgtatcgtagaaatgggcgccaaggacaccgataactctgaggattcagcaccgcaacaa tccagcttgtatctgaatataggtctgcaaaacggcgtattgctcagaatggtgctagat ccgatttccggcgatctcgcagacacgagaactcgctatctgggctctcgtcccgtgaag ctcttcagaatacgaatgcagggtaatcaggcggtgctggcgatgagcagccgatcgtgg ctgagctactaccaccagaatcgtttccacctcacgcccttatcttacgaaagtctagag tttgcgtcgggcttcagctccgaacagtgtccggagggtatcgttgccatatcgacgaat acgctgagaattttggcgcttgaaaaactcggcgccgtgttcaatcaagtcagcttcccg ctggaatacaccccgagaaagttcgcaattcacaatgactccgcacatctggtggtaatc gagacggaacacaatgcttacaccgaagaaacaaaacagcaaagaagattacagatggcg gaagaaatgcaagaggcagccggcgcggatgaggccgccgtcgctcgggaattggcggag gcattcttgtcggaagagccgaacgaggcggtttttggcgccccacgggcgggcccgggc ttgtgggcctccatgttgcgaataatggcgccgaccactgggcaaacatacgaagtgcat cgctttgagcaaaatcttgctgcgttatgtctctgtctcgtgaagtttgcgaatcaagga gaccaactatttcttattgtcggggtcgcaaaggaatttcaactgaatcccagggttagc aatggcggttccctttacacatacaaagtaaatgcggactgcaccagtatcgagctgctg cacaaatccccgttggatgaggtaccgctggccatttgtccgtatcagggtcgagtattg gtcggcgtaggtaggatgttgcgattgtacgacatgggtaagaagaagttactgcgaaag tgcgagaacaagcacatacccaacgccgtggtctcgatcaatgccattggtcagcggatt tacgtcagcgacgttcaagagtccgtatatgctgtgagatacaagcgtcaggagaatcag ttgatagttttcgcagatgacactcatcccagatggattacaaccacatgcgtgttagac tatgataccgttgccactgccgataaatttggaaacatagctgtgatacgactggcgacc ggcattaatgacgacgtggacgaggatcctactgggaacaaggctttatgggatcgaggt ttgctaaacggtgctagccaaaaagcagatacggtagcgtgttttcatgtcggagagacg gtgatgtcgctgcaaaaagcaactcttataccaggtggttctgagagtttggtctatacg actcttagcggaacggtaggcgtgctcgtaccgttcaccagtcacgaggatcacgacttt tttcaacatctggagatgcatatgcgatccgaacatccgcctctttgcggcagagatcat ctgtctttccgatcatattattatcctgtaaaaaatgtcatcgacggcgatctctgcgag cagttcaattcgatcgagcctgctaagcagaaaagtatttccggcgatctcgagagaacg ccgtccgaagtgtcgaagaaactagaggatatacgtacacgttacgcgttctaa

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