Linepithema humile (Argentine ant): 105673972
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Entry
105673972 CDS
T04898
Symbol
Rpn11
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105673972 (Rpn11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lhu01002
]
105673972 (Rpn11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105673972 (Rpn11)
03036 Chromosome and associated proteins [BR:
lhu03036
]
105673972 (Rpn11)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105673972 (Rpn11)
Peptidases and inhibitors [BR:
lhu01002
]
Metallo peptidases
Family M67
105673972 (Rpn11)
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105673972 (Rpn11)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105673972 (Rpn11)
BRISC complex
105673972 (Rpn11)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
105673972 (Rpn11)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105673972 (Rpn11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
105673972
NCBI-ProteinID:
XP_012225410
LinkDB
All DBs
Position
2:complement(5197299..5200048)
Genome browser
AA seq
253 aa
AA seq
DB search
MDNLPLQKVELQTDVYMVCLQHALSTENFEVMGLLIGNFECGVAKISAVIILRRLDKKKD
RVEISSEQLLKAAAEAERLTIELKRPMRVLGWYHSHPHITVCPSHVDVRTQATYQTMDHS
FVGLIFSVFSEGKESKEHEIYLNCFQSDNGEATEIPLQIVHTPDISDRCLRTMTDLSKIL
VQEEEDMAEACKDHPDVLASIHNNAVRTRALVHITDIITKPLVQTLEKRIALNKLRAMHL
QRQLQELQKIYNG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggataatttaccattgcaaaaagtggagctgcaaacagatgtttatatggtttgtttg
caacatgcattatcaacagaaaactttgaagtgatgggtttactcattggtaactttgaa
tgtggagtagctaaaatatcagctgttatcattttacgacgtttagataaaaagaaagac
agggtagaaatttcatcagagcagttattaaaagctgctgctgaagctgagcgattaaca
atagaattaaagcgccctatgcgtgttcttggctggtatcattcacacccacacattaca
gtttgtccgtcacatgttgatgttagaactcaagctacttaccaaaccatggatcacagt
tttgtgggcttaatattctcagtattttcagaaggcaaagaatcaaaagaacatgaaatc
tatttaaattgctttcaatcagacaacggtgaagccacagagataccattacagatagta
catactccagatatttcagacagatgtttaagaaccatgacagacttgtcaaaaattttg
gtacaagaagaagaagatatggctgaggcttgtaaagatcatcccgatgtccttgccagt
attcacaataacgctgtcagaacacgtgccttggttcatataacagatattattacaaaa
cctttggtacaaacactggaaaaaagaatagcattaaacaaattacgtgctatgcacctt
caaagacagctacaagaattacaaaaaatatataatggataa
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