Linepithema humile (Argentine ant): 105674152
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Entry
105674152 CDS
T04898
Symbol
Sin3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105674152 (Sin3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105674152 (Sin3A)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105674152 (Sin3A)
REST complex
105674152 (Sin3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
105674152 (Sin3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
105674152
NCBI-ProteinID:
XP_012225715
LinkDB
All DBs
Position
3:complement(19334775..19358564)
Genome browser
AA seq
1520 aa
AA seq
DB search
MKRVRGLDDVASPPAKHSSVSAGSGIGGGGGGSLEYHTSSGIGVVVPGQAVRSVTSKEMP
GSIQFGTAQTQQQYTGAIVVPTAAPSPIKQANNSTAGLSSTCGGSSINTSGGLHSGIGGG
SSHTMASQQPTSGSQNQAHTQQQSTIRHKVHSGNVTPMASTPPGGPNLGGGSGSQQFQRL
KVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVG
FNTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQP
AKAPPVLQIMQGSGNIHHTIANSITTNSLTVHAPSPPPVPVYNNSHISTAQAQAVSQALS
QADGISTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKES
GHIGGTNSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSVMFQT
NKTTSVNDHTAIVKKPIGLKTPYNNSGTIPRDLRESSGTTGLERDSRDHRERERDRSSIR
DINSGQKFGHSTGQLKRSPSFSTSTTAGNSHHIQHGPPPLKKHKVASMRDVTVTEAGKYG
TLNDYAFFDKVRKTLRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFK
DFLGYLPDSSTITTTNAANVMGVENFPNNIVRSHQERPQGDLAMEIDYTACKRLGASYCA
LPKSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELD
VVIETNASTIRVLEGVHKKINRMSQEEAQKFKLDDCLGGCSSTIHQRALKRIYGDKAVDI
IEGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND
VKALRSKSLFNEIETLYDERHEQGDDGNGDGQGNNGPHLILPYKDKSVLDDAANLLIHHV
KRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDINVAACNNSQSVTT
TSSLSGLQANRSKTPASPNTSLTPNKSETDIKVPIHALSNDPDEAYTLFMGSNNWYLFLR
LHHILCERLTKMYDRAVTLAEEESKYKQQRKESTAVALRLKPKSEIEIEDYYPAFLDMVK
NVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPICQQCMELFQRE
QRQSKESSGGGGLCATAYMRLGAELSYQRKAEKAMADENCFKIYIYKKDCKMTMELLDTE
GDETMDSGCREREREGVTVSEKWSTYVERFSAPATGQTSPKDTPALTENEPTTNHPVSSE
AARGGRGRKRKNTDISKKIDGNAWSSLGRTSAGRKPVFLYRNIKSYQKHAAKLMRGKASL
LDTNHSEKVPESADTPDIINSDETQCRFNPNSYTMFFIVHKDRFLYKQNSISRAKKCHPA
ITKRMDSKFHHWHASWVSKNGTDIQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYRQ
YNRFRVERLQSDPLTEGSCV
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcggactggatgacgtagcatcaccaccagcaaagcactcgtcagtg
agtgcgggaagtggcataggtggtggaggaggaggtagtttagaatatcacacaagcagt
gggataggcgtcgttgtacccggccaagcagttcgatctgttacatcaaaagaaatgcca
ggaagcatacaatttggtactgctcaaactcaacagcagtacaccggtgcgattgttgtg
ccaactgcggcaccgtctcctattaaacaagcaaacaactctacggcaggactaagttcc
acatgtggcggtagcagcataaatactagcggaggcttacacagcggaataggtggtggc
agtagtcacactatggcctctcaacaacctacatcgggatcacaaaatcaagcccacact
caacaacaatcgacaataaggcataaggtacactctggtaatgtaacgcctatggcttct
actccgcctggtggtcctaatctgggaggaggaagtgggtctcaacagtttcagagatta
aaagtggaagatgcattgtcttatctggatcaagtcaagtataaattcagtgatcaaccg
caggtgtacaatgatttcttagatatcatgaaggaatttaaatctcaaagtatagatact
ccaggggtaataacccgagtgagtcatctatttaaaggacaccccgaactcattgttggc
ttcaacacatttctcccaccaggttataagatagaggtacaagcgaacgaacagggatat
gcctttcaagtgtcagtcagtatgccgagtccgacagcaacacatactgccacgttatcg
cagcatcattgcacagtaaatgttggttcgcctccggtggctagtccacccacgcagcct
gcaaaagcacccccagttttacaaataatgcaagggtcgggaaatatacaccataccata
gcaaacagtattacgacgaatagtttgactgttcatgcgccttcaccaccaccagtaccg
gtgtataataattcacatattagtaccgcccaggcgcaagctgtcagtcaagctttaagt
caagcagatggtatatcaactggtggacaaacgcagcaaagtcagccggttgaattcaat
catgcgataaactacgttaataagatcaagaatcggttccaaggtcagccggacaaatac
aaacggtttttggagatattacatacgtatcaaaaagagcagcgaaatttaaaggaatcc
ggccatataggaggtacaaattctggtgctacaggaggaacaaaacacttaacagaagca
gaagtttatagccaagttgctaagttatttgaaaatcaagaagacttgctcgctgaattt
ggacaatttttgccagatgctacaaatcagcaaagttcgttgtctgtcatgtttcagact
aataagacgacatcggttaacgatcatacggcaattgttaagaaaccgattggacttaaa
acaccttacaacaattccggaactattccgagagatcttcgagagtccagcggtacaacc
gggttggaacgcgatagtcgggatcacagagaacgagaacgagatagatcgagcataaga
gatataaacagcggtcagaaatttggacatagtacagggcaattaaagaggagtccgtca
ttctcgacttcgacgacagcagggaattctcatcacatacaacatggaccaccgccttta
aaaaagcacaaagtggcttcgatgcgtgacgttaccgttacggaagctggaaaatatggc
accttgaacgactatgctttcttcgacaaggttcgaaagacgcttagatcgcaagaggtt
tacgaaaattttcttcgatgtctcgtactttttaatcaagagatagtatcgaaatctgaa
cttgttcaattggtgacaccattcctcggtcgttttcccgaactactacgctggttcaaa
gatttcctcggctacttacctgattcgtccactattacaacgacaaacgcagcaaacgtg
atgggtgtggagaatttcccgaataatatcgtgcggagtcatcaagaacggccgcaaggt
gacttggcgatggaaattgattatacagcgtgcaaaagattaggagcgtcgtattgcgca
ttgccgaaatcatacattcaaccaaaatgtagcggcagaacgcaattgtgtaaggaagtt
cttaacgatacctgggtttcgtttccaacttggtcagaagacagtacatttgtaacgtca
aggaaaactcaatacgaagaatttatatatcgatgcgaggatgaacgtttcgaattagac
gttgtcatagaaaccaatgcgtcaacgattagagtgcttgaaggagttcataaaaaaata
aatagaatgagccaagaagaagcacaaaagtttaagcttgacgattgtttgggtggttgt
tcttccacaattcatcaacgagcgttaaagaggatatatggtgataaagctgttgatatt
atagaaggtctcaagaaaaatcctgtagtagctgtgcctgttgtgctccgtcgattgaaa
gccaaggaggaagaatggcgggaggcacaaaagggattcaataaaatctggcgagaacag
aatgagaaatattacttgaaatccttagatcatcagggaattaacttcaaacaaaacgat
gtaaaagcattgagatctaaaagtttattcaatgagattgaaactttgtacgacgagagg
cacgaacaaggtgacgatggtaacggtgatggccagggaaacaacgggccgcacctcatt
ttgccatacaaggacaaatctgtactagacgatgctgctaatcttctaatccatcatgtt
aagcggcagaccgctattcacaaagaagacaaacaacgaataaaacttttattgaagcat
ttcatacctgatctctttttccatccacgacaagaacttagcgatgacgagagagacgag
gacgatgaaaaagaagatataaacgtggcagcatgtaataattctcaatctgtgacgact
acttcatcgttgagtggtttgcaagctaatagaagtaaaactcccgcgtcgccaaatacg
tctttaactcccaacaaaagtgaaactgatatcaaagtacccattcatgctctttcgaac
gatcccgatgaggcgtacacgcttttcatgggtagtaataattggtacctctttttgagg
ttacaccacatactttgtgaaagattaactaaaatgtacgacagagcagtcaccctcgca
gaagaggagtcgaaatataaacagcaacgaaaagaaagtacagcggtcgctctgagatta
aaaccaaaaagtgaaattgaaattgaggactattatcctgctttcttggacatggttaaa
aatgtccttgatggtaatatggaaagtacagcgtacgaggatacgttacgagagatgttc
ggtatacatgcctatatagcctttactctcgataaagtcgtaacttatgctgtgagacaa
ttgcagcacttggtctcagatcctatatgtcaacaatgtatggaattattccaaagagag
caacgtcaatctaaagaaagcagcggaggcggtggattgtgtgctacagcgtatatgaga
ctaggagctgaattgtcatatcaacgcaaagctgaaaaggcaatggcggatgaaaattgt
ttcaagatatacatatacaagaaagactgtaaaatgacaatggagttgttagatacggag
ggtgacgaaacgatggatagcggctgtagagagagagaaagagaaggcgtcacagtctct
gagaagtggtcgacgtacgttgagagattctctgcacctgcaactggtcaaactagtcca
aaagacactcctgccttaacagagaatgagccgacgaccaatcatcctgtgagtagcgag
gcagcaaggggggggaggggcagaaaacgcaagaacactgacattagcaagaagattgac
ggaaacgcttggagttctttaggcaggacttcagctggacgtaagcctgtttttctctac
cgtaatattaaatcatatcaaaagcacgctgcgaaattaatgagagggaaagcatcttta
cttgacaccaaccattcggagaaagtcccagaatcggccgatactccggacattattaat
tctgatgaaacgcaatgtagatttaatcctaatagttataccatgttttttattgttcat
aaggacagatttctttacaaacagaactccattagtcgtgctaaaaagtgccatccagcc
ataacaaagcgtatggattccaagtttcatcattggcatgcatcgtgggtgtctaagaat
ggtacagacattcaacatcgattgtgtcaagattggctaatgggacgatatgagaattta
attcctcataggacacgagtaataacggataatgatcaaacacgttctccctatcgacaa
tataatcgttttcgagtagaacgcttacaatctgatccattgacagaaggatcatgcgtc
taa
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integrated database retrieval system
