Linepithema humile (Argentine ant): 105674347 Help Entry 105674347         CDS       T04898                                  Symbol Col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism lhu  Linepithema humile (Argentine ant) Pathway lhu04382   Cornified envelope formation lhu04512   ECM-receptor interaction lhu04518   Integrin signaling lhu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lhu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105674347 (Col4a1)    04518 Integrin signaling     105674347 (Col4a1)  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     105674347 (Col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     105674347 (Col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lhu04147]     105674347 (Col4a1)    00536 Glycosaminoglycan binding proteins [BR:lhu00536]     105674347 (Col4a1) Exosome [BR:lhu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    105674347 (Col4a1) Glycosaminoglycan binding proteins [BR:lhu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105674347 (Col4a1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  105674347 NCBI-ProteinID:  XP_012226018 LinkDB All DBs Position 1:606215..630164 Genome browser AA seq 1994 aa AA seqDB search MTQLGLRFVATAVCLAGIASAQYNSTWSQKPPPVVPLDTARGDIHIGKPTNGSDDDGNSE WNYNTGFTDEGDYDTERRNYNSTGHHSPDERTRWNIHRNRSDPYDPRWYHRNRASQSGYD NRYPESGSSSGSRTDENRPDPGHSDGFDTYSGAGESERGGGSYNYQGGSSDPYGGSDPYG SRDPYGSRDPYGSRDPHRGGYGAGGADSYGRRTDDGRGGGRGDPYGGGRGSGDSHGGGRG SGDAYGGGRGSYGNYGEDNENYPSNFQVVPMPGAPRNCTGSGCCVPKCFAEKGSRGPPGI VGPQGPKGQRGFPGAEGLLGPKGEKGDPGPQGPHGAKGDRGKMGMPGFPGINGVPGIQGS PGSPGLPGRDGCNGTDGQPGHHGLPGEPGPRGYKGPQGSKGDKGQPAYAGAFPVGQKGEP GMDGVRGPPGPPGVQGDRGFSGLKGEQGPYGAPGVPGPKGAKGNMGLGFEGIKGEKGVKG EQGLPGTTAPIMPFEGTSEVTGPPGEQGLRGDKGEMGPEGQKGEPGFIGDHGIPGGPGHK GEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGIDGLEGLSGRPGKKGEPGQDGPMGVPGLR GPPGPPGGGKGRPGPPGPKGPRGFPGPTGPRGTDGFPGDPGPRGPIGLQGGPGLPGIPGP EGFPGEKGGKGEPGLTGFPGGPGPRGFDGPPGPAGPRGPPGEKGLSIMGPKGIDGTPGFD GEKGQKGERGYGGVRGRPGDSLDGIPGIPGAPGEKGEAGVAGRDGLPGIPGAIGEKGDIG GRCIDCIPGLRGVKGDRGADGIPGLTGPRGPPGERGFPGESGVDGLPGAIGPPGPSGKDG IPGSPGPQGEPGTPATVTYNMLRLEKGDKGVRGELGRQGPPGPEGPAGEKGRPGFEGFPG LKGTPGDRGFPGQDGVPGRPGTPGRKGEKGLSIKGESGESGRPGSPGQKGEPGLYGSKGE PGQCPPLNTIKGFKGDRGLTGDKGEPGSPGEDGLPGDRGLQGFSGPPGAGGPIGAPGPVG PRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGDKGEPGISVKGSPGLAGPQGE KGEKGLPGPPGKEGPDGYPGLPGFAGEKGEIGAPGINGLPGAFGEKGDTGPVGPPGPPGV AGLPGTDGSKGEPGLPGEPGRSGLPGFPGAKGDRGEPGIDGPKGYPGRRGLPGTPGRPGV DGPPGIKGEHGDQGSPGFPGLPGMEGKPGRPGISGLKGDQGLPGASGLPGLIGYEGIKGD IGLPGLPGRKGEPGQVSEKGQKGEPGMPGIRGPQGPPGRDGIDGAKGEPGRPGIGRDGLP GLKGESGAPGRDGLPGLQGQKGDTGVRGFPGMKGDLGPSGVSGEPGPPGIDGLPGEIGDV GSPGSPGFPGLDGEIGSPGRPGLDGVKGDRGLPGLVGLPGIPGAFGDKGDRGPPGPTIQI KGEKGEPGIPGFPGGPGEKGDQGLLGIAGYDGEKGDRGLPGLEGEPGPHGAPGPKGEQGP SGIPGVSGITIKGEKGLPGLPGKHGRDGFPGRIGEKGELGLPGLPGPKGDAGPYGPIGPQ GGKGDQGPPGLTGPPGRDGAPGLAGVPGFTGDKGSKGDQGLPGLYGAPGQKGESGPPGPN GLDGPPGERGERGWDGVNGLPGPVGEKGDRGYPGAVGLAGIIGYAGLKGDKGDDCIEPPM GPKGDRGYPGPAGPPGPSGEKGLPGPPGFPGLDGIKGAQGFIGPAGPPGLPGLPGPVGAS GLPGLQGPVGSPGLIGEPGAPCETTPDYLTGILLVKHSQSQSVPVCEAGHIKLWEGYSLL YTDGDERAHSQDLGYAGSCVRKFSTIPFLFCDVNNVCQYASRNDRSYWLSTNSPIPMMPV EETAIEEYISRCVVCEVPANVIAVHSQSISIPECPAGWTGLWIGYSFVMHTGAGSQGGGQ SLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIEDGQQFRSPEKQTLKAGNL RSRISRCQVCIKNT NT seq 5985 nt NT seq  +upstreamnt  +downstreamnt atgacccagttgggattgcgattcgtcgcaaccgcagtttgcctggccgggattgctagt gcgcaatataattccacatggtcgcagaaaccgcctccggtcgtgccgctggacacagca cgaggtgatattcatatcggaaagcccacaaacggtagcgatgacgatggtaattcggaa tggaattacaacactgggttcacggacgaaggagactacgatacggaaaggcggaactac aattctactggtcatcacagtcccgacgagaggactcgatggaatattcacagaaacagg agcgatccttacgatcctcgatggtaccatcgcaatcgagcatcgcagagcggctacgac aataggtatcctgaaagtggcagttcctcaggatccagaactgacgaaaatcgaccggat cccggtcacagcgacggattcgacacgtatagcggcgccggcgaaagtgagcggggagga ggatcctacaactatcaaggaggatctagtgatccttatggcggcagcgatccttatgga agtcgtgatccttacggaagtcgtgatccttacggaagccgtgatcctcacagaggaggc tatggggcgggaggtgcggattcttatggtcgaagaaccgacgacggtcgcggcggtggt cgtggcgatccttacggaggaggtcgcggcagtggcgattctcacggaggaggtcgcggc agtggcgatgcttacggtggcggccgtggtagttatggcaattatggcgaggacaacgaa aattatccgagtaattttcaagtagtgcctatgcctggggcacctcgaaactgcactgga tctgggtgctgcgtacccaagtgtttcgccgagaaaggatcacggggaccgccaggaata gtcggaccgcaaggtcctaaaggacaacgaggatttccaggagcagaaggtcttctagga cccaaaggtgaaaaaggagatcccggcccgcaaggtccacatggtgcgaaaggtgacaga ggaaaaatgggtatgcctggctttcccggtataaacggtgtgccgggaatacaaggatct ccaggatcccctggtttgcctggtcgtgatggttgcaacggaacagatggtcagcccggc catcatggtcttcccggagaacccggacctcgtggttataaaggtccacagggttctaag ggagataagggtcaaccagcgtacgccggtgctttcccggtgggtcaaaagggtgaacct ggtatggacggtgtaagaggtccccccggtcctcctggagtgcaaggagaccggggtttc tctggtttaaagggcgaacaaggtccttatggtgctccaggcgtgccaggtccgaaaggt gcgaaaggaaatatgggtcttggattcgaagggataaagggagaaaagggtgtgaaggga gaacaaggacttccgggtacaaccgcgcccattatgccgttcgaaggaacctcggaagtc acgggtccgcccggagaacaaggattaagaggagacaaaggtgaaatgggaccggaagga caaaaaggagagccaggatttataggtgatcatggcatacctggaggaccaggccacaaa ggagaaaaaggtcttccaggagctccaggcattcgtggtagagatggtttctctggacct cctgggcctcctggacgaaagggcgatcgaggtattgacggattggaaggactttctgga cgacccggcaaaaaaggagaacccggccaggatggacctatgggagttccaggattgcga ggacctcctggtccgccgggaggcggtaaaggaaggccgggaccaccaggaccgaaagga ccacgtggttttccaggacctacggggccgcgaggaacagatggttttccgggagatcca ggaccgagaggtcccataggtttgcaaggaggccctggtttacctggaattccaggtcca gaaggtttccccggagaaaagggcggaaagggtgagcctggcttgaccggatttcccgga ggtccaggaccgcgtggattcgacggaccacccggaccggcaggaccgcgaggaccgcca ggagagaagggattgtcgataatgggtccgaaaggaatagatggaacgcccggtttcgac ggagagaaaggtcaaaagggagaacgaggttacggaggtgttcgaggtcgaccgggagat tctctggatggtattccaggaattccgggtgcaccgggtgaaaaaggagaagcgggagtg gcaggaagagacggcttaccgggtattcctggagcaattggagagaaaggagatatcggc ggtcgttgcatagattgtataccgggactgcgaggcgttaaaggagaccgtggtgcagac ggtattccaggacttactggacctcgaggaccgccaggagaacgcggtttccctggagaa tccggcgtcgatggtttaccgggagcgattggaccgccaggaccatcaggaaaagatggt atacccggttctccaggacctcaaggtgagcctggaaccccagcaacggtgacatataat atgcttagattagagaagggagataaaggagtgcgcggagaactgggtcgacaaggcccg ccaggaccagaaggacctgcgggagaaaagggcagacctggattcgaaggttttccggga ctcaaaggaacgccgggagatcgagggtttcctggacaagatggagttccaggaagaccg ggcacgcctggacgtaaaggagagaaaggattaagtataaaaggtgaatccggtgaatca ggtcgaccaggatctccaggacaaaagggagaacctggtttatatggctctaaaggagaa cctggtcaatgcccgccactgaacacaatcaaaggctttaaaggcgatcgtggtttaacc ggtgacaagggagaacctggatcacccggtgaagatggattacctggtgatagaggattg caaggtttctcaggtccacctggtgcaggcggtcctatcggtgctcctggcccagtgggt ccacgtggtttaccaggtccgcgcggtgacaagggtaacatggggccgatgggtttccca ggagaacctggccgagaaggacctagaggtttcccgggcgctccggctccgaagggtgac aagggagagcctggaatatcagtcaagggtagtcctggtttagcaggtcctcagggtgaa aagggagagaaaggcctgcctggaccaccaggaaaagaaggtccggatggctatccggga ttaccaggttttgctggcgagaaaggagagatcggcgcaccgggaataaatggcttgcct ggagcgttcggtgagaaaggagataccggtccagtcggcccacctggtcctccaggagtc gccggtcttccgggaaccgacggaagcaaaggcgaaccaggattaccgggagaacctggt agatcgggtcttcctggattccctggagcgaaaggtgatcgcggtgaaccaggtatcgac ggaccaaaaggatatcctggcagacgaggtttgcctggtactccaggtagacctggcgtg gatggtccaccgggtataaagggggaacacggtgatcaaggttcaccaggattcccagga ttaccgggtatggaaggaaagcctggacgtcctggaatatcaggtctgaaaggagatcaa ggattgcctggcgcgtcaggtttaccaggtcttatcggttacgaaggaattaagggcgat attggtctacctggtctaccgggaagaaaaggagagccgggtcaagtttcggaaaaagga cagaaaggtgagccaggaatgcctggaatacgaggtcctcaaggtccaccaggacgcgat ggtatcgatggagcgaaaggtgagcctggcagaccaggcatcggtcgtgatggattgcct ggattgaagggtgagtcaggcgcaccaggtcgggacggattaccaggcttgcaaggccaa aaaggtgataccggcgtacgaggattccccggaatgaaaggcgatttgggtccatcaggt gtttccggagaaccaggaccacccggtatagatggccttcctggagaaattggtgatgtt ggatcaccgggatcacctggtttccctggacttgatggtgaaataggttctcctggacga cctggacttgatggtgtcaaaggagatcgcggtttaccaggactcgtcggattgcctggc attcctggagcctttggagacaaaggagatcgcggccctccgggaccaacaatacagatt aagggagaaaaaggtgaaccaggtattcctggattccctggaggaccaggtgagaaagga gatcaaggtctgctcggtatcgctggttacgatggcgagaaaggtgacagaggtttgcct ggactcgaaggagaaccgggacctcatggtgcccctggacctaaaggcgaacaaggacct tctggtattcctggcgtttctggaattacgataaagggcgagaagggtttgcctggttta ccaggtaagcacggtcgagacggttttccaggacgaatcggagagaaaggtgaactagga ttacctggcctgcctggaccgaaaggagatgctggtccttatggaccgattggaccacaa ggaggaaaaggagatcaaggaccgccgggtttgaccggaccaccaggacgcgacggagct ccaggtcttgcaggcgtaccaggatttactggagataaaggttcgaagggtgatcaagga ctgcctggattgtacggcgccccaggacagaaaggagaatccggtccgccaggaccgaat ggattggatggacctccaggagagagaggcgagcgcggttgggacggagtgaatggtcta cctggaccagttggcgagaaaggtgatagaggttatcctggtgcagttggattggcgggt attattggttacgcaggtctgaaaggagacaaaggtgacgactgtatcgagccgccgatg ggacctaaaggcgatcgcggatatcctggaccggctggcccgcctggcccgtcaggagaa aaaggacttccaggtccgcctggcttccccggcttagacggtatcaaaggcgctcaaggt ttcatcggtccagcaggacctcccggattaccgggattaccgggaccagtcggtgcgtcc ggtctgccgggtcttcaaggtcctgtcggttcgccaggacttatcggtgagcccggcgcg ccctgcgaaacgacgcctgattatcttaccggtatcttgctggtcaagcatagtcaaagt caaagcgtgccagtttgcgaggctggccacatcaagctttgggaaggatacagtttactc tacaccgatggcgatgaaagagcgcattctcaagacttaggttacgccggctcgtgcgta agaaagttctcgacaatacctttcttgttctgcgacgtcaacaacgtctgtcagtacgct agtcgcaatgatcgttcttattggttatcgactaatagtccaattcccatgatgcctgtc gaagagacggcgatagaagaatacatctccaggtgcgtggtgtgcgaagttccggctaat gtgatagcagtacacagtcaatcgataagcattccagaatgtccggcaggatggaccggt ctttggatcggttatagttttgttatgcacaccggcgcaggttctcagggcggtggtcag tccctgtcgagtcctggttcctgcctcgaggacttccgcgccacaccgttcatcgagtgc aacggcgccaaaggacactgccattactattctaatcagtacagcttctggatggtgacc atagaagatggccagcagttcagaagccccgagaaacaaactctaaaggcgggcaatctt aggtcccgaataagtcgctgccaagtttgtataaagaatacgtaa

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