KEGG   Linepithema humile (Argentine ant): 105674430
Entry
105674430         CDS       T04898                                 
Symbol
beta'COP
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
lhu  Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lhu04131]
    105674430 (beta'COP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lhu04147]
    105674430 (beta'COP)
Membrane trafficking [BR:lhu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    105674430 (beta'COP)
Exosome [BR:lhu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   105674430 (beta'COP)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 HEAT_GCN1
Other DBs
NCBI-GeneID: 105674430
NCBI-ProteinID: XP_067209780
LinkDB
Position
1:4670741..4676460
AA seq 939 aa
MPLRLDIKRKLTARSDRVKSVDLHPTLPWMLCSLYQGNVNIWNHETQTLVKTFEVCDLPV
RTAKFVPRKNWVITGSDDMQIRVFNYNTSERVHAYEAHSDYVRCIAVHPTQPFILTSSDD
MWIKLWNWEKSWICQQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSSTANFT
LEGHEKGVNCVDYYHGGDKPYLISGADDRYVKIWDYQNKTCVQTLEGHTQNISAVCFHPE
LPIVLTASEDGTVRIWHAGTYRLESSLNYSFERVWTIACMRGSNNVAIGYDEGSVMVKVG
REEPAVSMDSLGGKIVWARHSEIQQVNLKALGEEAQDGERLPLAVKDMGACEIYPQTIQH
NPNGRFLVVCGDGEYIIYTSMALRNKAFGQASEFVWAADSSQYAVRESNTTVKVFKNFKE
KKSFKPDFGADGIFGGFLLGVSSGSGLSFFDWDSLRLIRRIDIQPTHVYWAENASLVALA
TSDQYFILKYHSDAVANAAENAEDIENAFEMVAEMNEVVKTGLWVGDCFIYTNSVNRINY
FVGGEVVTVSHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFET
ANRVLPTVPKEHRTRVAHFLEKQGFKEQALAVSTDPEHRFELALALGNLITAHTLAKEAN
SQQKWRQLASLATQKGKLCLAQECLHQAQDFGGLLLLATSTGNADMIEKLGTIADETGKN
NISFLSNFILGDIDKCLDILIKTDRIPEAAFFARTYAPSKISHIIKLWKEKLSAVSEKAG
QSLADPEQYENLFPGYREALKVEKFLRDESKRKIPASAFPTVTSNVERKPIEEMLVAEQS
GTFQYKGGISSTSEAETKLPETPLDNYTQRLQDISISAKDSVLKASAATIPTEKATTKPA
SSSRPLTIDDDDDLDIDLDIDENIDTSGVNLDDDLLEED
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgcctttgaggttagatatcaagcggaagctaacagctagatcagacagagtgaaaagt
gtagatcttcatccaacattaccatggatgttatgttctttataccaaggcaacgtcaat
atttggaatcatgaaacacaaacgttggtcaagacatttgaagtatgtgatctgcccgta
agaacagcgaagtttgtaccacgcaaaaactgggtgatcactggttctgatgacatgcaa
attagagtatttaactacaatacttcggaacgcgttcatgcctatgaagcacacagtgat
tatgtcagatgtatagcggtgcatccaacacaaccattcatacttaccagcagtgatgac
atgtggattaaattgtggaactgggagaagtcctggatctgccaacaagtattcgagggt
cacacccactacgtcatgcagattgtattcaatcccaaggacaacaacacttttgccagt
gcatctctggatagaaccgtcaaagtatggcaacttggttcgtctacagctaattttaca
ctggaaggtcacgagaagggtgtcaactgtgtggattattatcatggtggggataagccg
tatttgatatcaggcgctgatgacagatatgttaaaatatgggattatcagaataagact
tgcgtgcaaaccctggagggtcatactcagaatatctctgccgtgtgtttccatccggaa
ttaccaattgttctcactgcctcagaagacggcactgtcagaatatggcacgctggaacg
tataggttggagtcttctctcaattacagcttcgagagagtgtggacgattgcatgtatg
cgaggctcgaacaacgtcgccatcggctacgacgaaggtagcgttatggtgaaagtcggt
agagaggaacctgccgtctcgatggattcgctaggcgggaagatcgtgtgggcgcgtcac
agcgaaattcagcaagtgaacttgaaagcgttgggtgaggaagctcaggatggcgagcgg
ctgccgttggccgtcaaggacatgggcgcctgtgagatttatccgcaaacgatacaacac
aatccgaacgggcgatttctggtggtctgcggcgatggggaatacatcatatacacatcc
atggcgttgaggaacaaggcgtttggccaggcgtctgaatttgtgtgggcggcagactcg
agccaatacgcagtgagagagagtaatacgacggtgaaggtattcaaaaatttcaaggaa
aagaaaagcttcaagccagatttcggagcggatggtatctttggtggatttttacttggc
gtatcgtccggatctggcctctcctttttcgattgggattcgttaagattgattcgtcgc
atagacatacagcccacgcatgtttattgggctgagaacgcctcgttagtggcattagca
acatcagatcaatattttatactgaagtatcattcggacgctgtcgctaatgctgcagaa
aatgctgaggatattgaaaatgctttcgagatggtagcagagatgaacgaagtagtaaaa
accggtttatgggtcggcgactgtttcatctacactaacagcgtcaaccgtattaattac
ttcgttggcggcgaagtggttacagtttcgcatctggacagaccgatgtacttgttggga
tacgtaccgagagataacagattgtatctatgcgataaggaactgtctgtcgtctcgtat
tctctcttgctctccgtgctagagtatcaaaccgcagttatgcggaaagatttcgaaact
gccaacagagtattaccgactgtcccgaaggaacatcgaacgagagtggctcacttctta
gaaaaacagggcttcaaagagcaagcgctggcggtatcaacggatcctgagcatagattc
gaactagcactcgcgctgggaaatctgataaccgcacacacgctagccaaggaagcaaac
agccaacagaagtggcggcagttggcttctctcgccacgcagaaaggcaaactttgtctg
gcgcaggagtgcttgcatcaggcccaagatttcggtggcctgttgttgttagccaccagc
acaggaaacgcggatatgatagagaagctcggcacgatcgcggacgaaacggggaagaac
aatatttccttcttgtcgaatttcatactaggtgacatcgataaatgcctggacatctta
atcaagacggacagaattcctgaggcggcgttctttgccaggacatacgcgcccagtaaa
atctcgcatatcatcaaattgtggaaagagaaactttcggcggtgagcgagaaggccgga
caaagcttggcggatcccgagcaatacgagaatcttttcccgggctacagagaagcccta
aaggtggaaaagttcttgcgagatgagagcaagaggaagattccggcttctgcatttccc
actgttacgtctaatgtcgagcggaaaccaatagaagaaatgctggttgccgagcagtcg
ggtacgtttcaatataagggcggcataagcagcacttctgaggccgagacaaaactgcct
gaaacaccactcgacaattacactcaaagattgcaagatatttcaatatctgcaaaagat
agcgtccttaaagcaagtgcagcgactattcccaccgagaaagcgacgacaaagcccgca
agtagttccaggcctcttacaatagacgacgacgacgacttggacattgatctagatatc
gacgagaacattgatacatcaggtgtgaatcttgacgatgacctcctcgaagaagattaa

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