Linepithema humile (Argentine ant): 105674469
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Entry
105674469 CDS
T04898
Symbol
Fmr1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 homolog A isoform X1
KO
K15516
fragile X mental retardation protein
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105674469 (Fmr1)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105674469 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
105674469 (Fmr1)
mRNA cycle factors
Stress granule specific factors
105674469 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
FXMRP1_C_core
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105674469
NCBI-ProteinID:
XP_012226214
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All DBs
Position
1:105061..121955
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AA seq
670 aa
AA seq
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MIGEQEIRSPEFVRVPALQHAYRKGGEPSHKSKMEDLTVEVCGENGAYYKAFVTDVFDEE
VLVTFENDWQPESKFPFAQVRLPPKDGSKSEFQENQEIEVFSRSNDQEAWGWWKALIKMS
KGGFQVVEYLGWDYTYTEIVASERLRAKNPNPPIDKNTFHKIEIEVPEELREFAKMDNAH
KEFQKAIGAAVCRYVPERGVLLAISRHENLHRHSSMLQEMHFRNLSQKVLLLKRTEEAAR
QLESTKLQTIGGKFRSSNFIYQRVSDFEAGVKTNSRYTDEFNVREDLMGLAIGAHGANIQ
QARKVDGITNIELEENSCTFKIYGETHEAVKKARSMLEYSEESIQVPRVLVGKVIGKNGR
IIQEIVDKSGVITTGSSGNIHVDKVRVKIEGDNEPQPTIPREEGQVPFVFVGTVESIANA
KVLLEYHLAHLKEVEQLRQEKLEIDQQLRSMHGSTTGPIPSFPPTRRGMVAGPEEGVSGR
GGRGGQSRGRGSRGRAPTRHNAGLRRDTLDGSEDRVRDLPPRGGHQGGAGNSGYMSGRQG
RPPTQRRDRRDERRRTTDDEDTVLDSQDVSSIDRESVSSMEGGSKGIRRRRLGRLRQPSM
TPTSITQTGSNAGPCDQSTMNSKEGTPANDVSVSNSSSQGPKGQREHRSRPPRMQQSNKP
KEALVNGTSG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgattggcgaacaggaaattcgcagccccgaattcgtgcgggtgcccgctcttcagcat
gcctaccgcaaaggaggcgaaccgtcacacaaaagcaagatggaggatctcacagtcgaa
gtatgcggcgaaaacggagcgtattataaggcctttgtcactgatgtctttgacgaggaa
gttttggtaacttttgagaatgactggcaaccagaatcgaaattcccatttgctcaagtc
cgtctacctccaaaagatggttccaaatcagaatttcaagagaaccaggagattgaagta
ttctctagatctaatgatcaggaagcgtggggttggtggaaagcacttatcaagatgagt
aaaggaggtttccaagtagtggaatacttgggatgggactacacatatactgaaattgta
gctagcgagcgactaagagccaaaaatccaaatccgcctattgacaaaaacacatttcac
aagatcgaaattgaagtacctgaagagctcagagaatttgcgaagatggacaatgcacat
aaggaatttcaaaaagcgataggggcagcagtgtgccgatatgtgcctgaacgaggagta
ctgctggccatctcccgtcatgaaaatctacatcgtcacagtagcatgctccaagaaatg
cactttcgaaacttatcgcaaaaggttttgctattgaaaagaaccgaagaagcggcacgt
cagcttgaatccactaaacttcaaacaatagggggcaaatttagatcttcaaactttata
tatcagcgtgtctcagactttgaggcaggagtgaaaacaaattcaagatatactgacgaa
tttaatgttcgagaagatcttatgggactagctatcggtgctcatggtgcaaatattcag
caagcacgaaaagttgatggcattacaaatatagaattagaagaaaattcatgcacattt
aaaatatatggagagacacatgaagcagtgaaaaaagctcgatcgatgctggaatacagt
gaggaatctatacaagttccacgggttttggtaggaaaagtaattgggaaaaatggtcgc
attatccaagaaatcgtcgacaaaagtggtgtaataacaactggctcgagtgggaatata
catgttgataaagtaagggtaaaaatagaaggagacaacgaacctcaaccaacgattccg
cgggaggaaggtcaggtgccctttgtctttgtcggtactgttgaaagcatcgccaatgcc
aaagttctattggaatatcatttggcacatttaaaggaagtagagcagcttcgacaggag
aaattggaaattgatcaacaattacgaagtatgcacggctcgactacaggaccgatacct
agttttcctcccacgagacgaggaatggttgcaggacctgaagagggtgtcagtggtcgt
ggtggtcgtggtggtcaatcgcgaggacgtggctctcgaggtagagctcccaccagacac
aatgccggtttacgtagagacactttagacggcagtgaagatcgtgtccgagatttacca
ccgagaggcggccatcaaggaggtgccggtaattcagggtatatgagtggcaggcaaggt
cgtcccccaacccagcgtagagatcgtagagacgaacgtcgtcgtaccacagacgacgaa
gacactgttttagacagccaagacgtttcaagcattgatagagagtcagtgtcgagtatg
gaaggaggatctaaaggaataagacgaaggcgacttggacgtttgcgacaaccaagtatg
acgccgacaagtattactcaaacaggcagtaatgccggcccgtgcgatcaatcaacaatg
aacagcaaggaaggaactcccgcgaacgacgtttccgtatctaacagcagttcccaagga
cctaaaggtcaaagagaacatcggtctcgtcctcctcgtatgcagcagagcaataagcct
aaagaagctctggttaacggtaccagtggctaa
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