Linepithema humile (Argentine ant): 105674654
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Entry
105674654 CDS
T04898
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105674654 (TAF1B)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
105674654 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
PH_TRF2_HOY1
Motif
Other DBs
NCBI-GeneID:
105674654
NCBI-ProteinID:
XP_012226577
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All DBs
Position
1:163519..168592
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AA seq
968 aa
AA seq
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MKMLICEVCNCTDFYKASGYFFCATCQTQSQDIREEVELELPIENTVRLRKTRIRRIRSD
KTDKELGWTSWELYNFVLIGLTNELVELGVTADIKITVLELWARYLGKLEVAFTSTKRKL
VPKLARSYKKRDAEIIYGKILSQKRARKRKKTSVTDSTASTCLSEETSLRELNRNKKLMI
TADYDRFVQSQASSERDTFSTFSQSVHSVQSTAKQSYENSRLQFNFSAKEEAKRVKNLAK
KIPKHKRSKYKRNHVTTQYKTGPELITPAKLWAILYLALRIHNQDIHLGDMLRYGREGHL
SYYKLNHLIPPEVILTGSNINFLSRVTDITHKGMRQIIGRMAKFLGVVKIICPDFLSIIN
RYCNELDLPRGVSLYAERLVALAPPKMKFYNKSCIPNYEARAMAFIIVVLKILLGLDGIT
EYEMSNVAERINGVIADEGICDMKLFSFREWQRYIEGRKAVLMNVHCPTKLKYRPNIPDV
NSSYIKFLESIDSKVDREEPEITTHKHLISRELVDAMKQCITNISYINLPLNEENKFPPS
LTPHHSYLQQLLEHTLHDVPSILRNGFSSTKIGYMTKPEFIYKLTSQYDIQLDFVHSNLH
FIEKTVSLFEQTKISSAKNLDDDIAVQDFVDKSSTEDIERNEDFVNYLDRKGPCQLQIDM
KKRQYFDYMQNIITDVKSDPPSAWSNEFIFDEILPDGKLSISDKDNNEDRDNDTYLKDIV
PEETKLLLNICKTYAINLSDAEKKGTFQDLNCTKQQKRKHFRNAQGKFVKHSAISTNQDK
KPNKDEYERDAELISSENLETKNLLPEISDILNLSINASVFDNLEISEYSVIDQSKDYQK
MFESAIEDSLFNVLDKKLNIDSNKSNKNNVLRLFTPFKNYWMYHCNFSRVKLKNFELLEK
MLPRSFRWLLNECATIIEMSTEDLYREVCLVEAYHAQVSKQLETYMSDVTSTEDCNDQTY
TNAILREW
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgatatgcgaagtctgcaattgcactgatttttataaagcgtctggttat
ttcttttgcgcaacatgtcaaacgcaaagtcaggatatcagggaagaagtagaactagaa
ctgcctatagaaaatactgtaagattgcggaaaacgagaattcgtcgcataagaagtgac
aaaacggacaaggaacttggatggacatcttgggaactatataattttgtcttaataggc
ttaacaaatgaacttgttgaacttggtgtaacagctgatataaaaataacagtgttggaa
ctatgggcaaggtatttaggaaaattggaagtagcttttacatccacaaaaagaaaacta
gtgccgaaactagccaggagttacaagaaaagagatgctgaaattatatatggcaaaatt
ttatcacaaaaaagagctagaaaacggaaaaaaactagtgtaacagattcaacagcttct
acctgtttgagcgaagaaacttctttgagagaattgaatcgtaataagaaacttatgatt
actgcggattatgacagatttgtacagtcacaagcaagttctgaaagagatacattcagt
acatttagtcaaagtgtacatagtgtgcagtctactgcaaaacaatcttatgaaaatagc
agattacaatttaatttttctgctaaggaagaagcaaaaagagtaaaaaatttggcaaaa
aaaataccaaaacacaaacgcagcaaatacaagcgaaatcatgtaacaactcaatataaa
acaggaccagaattaattacaccagcaaaattatgggcaatcttgtatttagctttaagg
attcataatcaggacatacatttaggagatatgctaagatacgggagagaagggcattta
tcttattacaagttgaatcacttgatacctcctgaagtaattttaacaggaagtaatata
aattttttatcacgggttactgacataacacataagggtatgagacaaataataggaaga
atggcgaaatttctaggagttgtgaaaataatatgtccagattttttatcgattatcaat
cgatattgcaatgaattagatctaccaaggggtgtatcgttgtatgcagaaagattagta
gctttagctccgccaaaaatgaaattttacaataaatcctgcatccccaattatgaagct
cgtgccatggcatttattattgtggtactgaaaatattattgggtttagatggcattaca
gaatatgaaatgagtaatgttgctgaacggattaatggtgtaatcgctgacgaaggcatt
tgtgatatgaaactattcagttttcgagaatggcagagatacattgaaggtagaaaggct
gttttaatgaatgtgcactgtcccaccaaattaaaatacagaccaaacattccggacgtt
aatagctcgtatattaaatttttggaatctattgattccaaagtagacagagaagagcct
gagataactacacataaacatttaatatcacgtgaacttgttgacgcaatgaaacagtgt
atcaccaatataagttacattaatttaccattgaatgaggaaaataaatttcctccatcg
ttaacgccccatcactcgtatcttcaacaattgttagaacatacgctgcatgatgttcca
agcatactccgaaatggcttttcttctacaaaaattggatatatgacaaaaccagaattt
atttacaaattaacttcacaatatgatatacaattagattttgttcattcaaatttgcat
ttcatcgaaaagactgtatcactttttgaacaaacaaaaatatccagtgcaaaaaatttg
gatgatgacattgcagtacaagattttgtggacaaaagtagtacagaagatatcgagaga
aatgaagattttgttaattatttggatagaaaaggaccctgtcagcttcaaatagatatg
aagaaaagacagtactttgactatatgcaaaacataattacggatgtgaaaagtgatccc
ccatcagcatggtctaatgaatttatatttgacgaaattcttccggatggaaaattgtcg
atttcagacaaagataataatgaagatagagacaatgatacatatttaaaagacattgtt
cctgaagaaacaaaattgttactcaatatttgtaaaacatacgctataaatctttcagat
gcggaaaagaaaggtacgtttcaagatttaaattgtacgaaacaacagaaacgcaaacat
tttagaaatgcgcagggtaaatttgtcaaacacagtgctatctctaccaatcaagacaaa
aagccaaacaaagatgaatatgaaagggatgctgaattgatttcatcagaaaatcttgaa
accaaaaatttattacccgagatatctgacattttaaatttgagtattaatgcatctgtc
tttgataatctcgagataagtgaatatagtgtgattgatcaatccaaagattatcagaaa
atgttcgaatcagcaattgaggactctctctttaacgtattggataaaaaattgaatatt
gattcaaataaatcaaataaaaacaatgtccttagattgttcacacctttcaaaaattat
tggatgtatcattgcaacttcagccgtgtaaaattaaagaattttgaattacttgagaaa
atgctgccacggagttttcgatggttactgaatgaatgcgcgaccattattgaaatgtca
acagaagatctctatagagaagtatgccttgttgaagcttatcacgcccaagtctcaaag
cagcttgaaacatatatgtcagatgtaacgagtaccgaagattgcaacgaccaaacgtat
accaatgcaattttaagagaatggtag
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