Linepithema humile (Argentine ant): 105674762
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Entry
105674762 CDS
T04898
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03440
Homologous recombination
lhu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105674762 (Top3alpha)
03460 Fanconi anemia pathway
105674762 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhu03032
]
105674762 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105674762 (Top3alpha)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105674762 (Top3alpha)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Topoisomerases
105674762 (Top3alpha)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105674762 (Top3alpha)
FA (Fanconi anemia) pathway
105674762 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Microp_apicomplexa_32
Zn_ribbon_GRF_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
105674762
NCBI-ProteinID:
XP_012226745
LinkDB
All DBs
Position
6:17696011..17700931
Genome browser
AA seq
1146 aa
AA seq
DB search
MAFLKLYNIASNYAIFCGHLNWTLKSIGSKLSKFTNASYGVKQYCSEYNMKVLNVAEKHD
AAKNIAGYLSRGTSRKREGLSVYNKIFEFNTQLWGQNCQMVMTSVSGHLLTYEFIGAYRK
WQGCHPLTLFDAPLSKLCSDESYIKIKKTLEREVKFCNALIIWTDCDREGENIGFEIIQV
CQAVKPNIRVYRAKFSEITKPSVERALQTLGEPDKAISDAVDVRSELDLRIGAAFTRFQT
LRLQKVFPDTLRDMLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKIKVTDDRDDTFVEF
RWARVRLFEKLPCQIFLDMCLERPEATVEKVACKPKSKWRPLPLDTIELEKQGSRKLRLN
AKETMKIAERLYTQGLISYPRTETNIFPKELNLRSLVEQQVGNQAWGNFAQGLLESGINP
RQGKKSDQAHPPIHPTKYSNSLQGNEAKVYEFVVRHFLACLSKNAEGLETTVEIDIAKEK
FVANGLKIIAKNYLEVYIYDKWNNKQIHSYEQGQVFRPTSIDMVEEKTSPPSLLTEAELI
ALMDKHGIGTDATHADHIDTIKSRQYVGLTDNQYFMPGKLGIGLVKGYDDMGFEMSKPHL
RADLEKDLQLICQRQKEPNEVLQNQINKYREVFKVAMERANLIDAALAHYLEERPTQAEQ
VQFAPVEEEIAILKCPKCGSNMILKERRQGRGKYISCMGYPTCTNVIWFPEAVEDVEILN
ETCNQCTENMRKLKFKLVRNVIPLYGTSYTTCIGCDTTFNEMLNIKEDCIRQNRRANYIQ
NNTRDTSSSTSSTSQLQVTQRQQPASNSTRSVWNNNDVALNRTSDTSGRSTQNHNSQPNR
SNTVNRNTTMSNNTNGARSVRNNNDVGLIRTSGTSGRSAQNHNSNVSQPNRPVNRTVNRN
TNNRGNFDSWDNSWDNFNTDDFNSSWDGSNQSASSNSHNATNRSSTWGNIDNDAEIMCNC
HQNAIQLTVRKEGPNKGRLFYKCAKPQGSGCDFFLWASDGAEPQSSAATSSRVPALNRDD
GSADHFSRVGTSNNDWGDSSTNDVMCQCNQPARKLTVHKEGPNKGRQFYGCPKGMNSTCN
FFQWADENDNQNTDWSNSVVNRGKNKTHSRGGSVSKRPRLTGSKRKCGNCGMEGHTRNRC
PDNAMD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcttttttaaaattgtataatatcgcatctaattatgcaatattttgtggacactta
aactggacacttaaaagcataggcagcaagttgtccaagtttacaaatgcttcttacggg
gtaaagcagtattgttcagaatacaatatgaaagttcttaatgttgctgagaaacatgat
gctgccaaaaatatcgctggttatttgtcacgtggtaccagcagaaagagagaaggctta
tctgtctacaacaaaatttttgaatttaatacacaattgtggggccaaaactgccaaatg
gtgatgacatcggtatcaggccatttattaacttatgaatttataggagcatatcgtaaa
tggcaaggctgtcatccattgactttatttgatgctccattgtcaaaattatgttcagat
gaaagttatataaaaattaaaaagacgttagagcgagaagtaaaattttgcaatgcatta
attatttggacagattgtgatagagaaggggagaacataggttttgaaattatacaggtc
tgtcaagcagtgaagccaaatattcgtgtatacagggcaaaattctcagaaattacaaaa
ccatctgttgaaagagctttacaaactttgggagagccagataaggcaataagtgatgct
gtagatgtaagaagcgaattagatttaagaattggtgctgcattcacaaggtttcaaacc
ttaaggttgcaaaaagtgttccctgatactcttagagatatgctcatcagctatggaagc
tgtcagtttccaacacttggatttgtagttgaaagatttctggcgattgatcggtttaag
tctgagccatactggaagataaaagtgaccgatgatcgcgatgatacatttgtagaattc
agatgggccagagtaagattgtttgagaaattgccttgccagattttcctggacatgtgt
ttggaacgcccagaagcaacagtagagaaagtagcatgtaagccgaaaagcaaatggaga
cctttacccctggataccattgaactggagaagcaaggctctcgtaagttacgtctaaac
gcaaaggagactatgaagatagcagagagattgtacactcaaggtctcattagttatcca
cgcacggaaactaatatatttccgaaggaattgaatctgagatctttggtagaacaacaa
gtcggcaatcaggcgtggggtaattttgcgcaaggtttattggaatctggaataaatccc
agacaagggaagaagagtgatcaagcgcatccgcctattcatcccacaaagtactctaac
agtttgcaaggaaacgaagcaaaagtctacgaatttgtggttcgacattttttggcttgt
ctatcgaagaacgcagaaggtctcgaaacaacggtggagatcgatatcgcgaaagaaaaa
ttcgtggctaacggtctcaaaataatagcaaagaactatctcgaagtttatatatacgat
aagtggaacaacaaacagatacactcttacgagcagggacaagtttttcggccgaccagc
atagatatggtagaagagaagacttcaccacctagcttgttaactgaagccgaattgatt
gcgttgatggacaaacatggcattggtacggacgccactcacgctgatcacatcgacacc
atcaaatccagacaatatgtaggtttaacagacaatcaatatttcatgccgggcaaattg
ggaatcggactggtcaagggttacgacgatatgggattcgaaatgtctaagccgcatttg
cgcgccgatctagaaaaggatttacaattaatatgccaacgtcagaaagagccgaatgag
gtgttgcaaaatcaaattaacaaatatcgcgaggtgttcaaagtggcgatggaacgtgct
aatctgatagacgctgctttagcacattatcttgaagagagacctacccaagctgaacaa
gtacagtttgctcctgtggaagaagagattgctatcttaaaatgtccgaaatgtggctcc
aacatgattttgaaggaaaggaggcaaggcagaggaaaatatattagctgtatgggttat
ccaacgtgtactaatgtaatctggttcccagaagctgtagaagatgtagaaattttgaat
gaaacatgcaatcagtgtacagaaaatatgcgcaaattgaaattcaaattagtgagaaat
gttatacctttgtacggtacttcttacactacttgtataggatgtgatactacattcaac
gaaatgttaaatattaaagaggattgtatcagacaaaacaggagagcaaattacattcaa
aataatacaagggatacatcaagctccacctcaagtacgtctcagttgcaagtcactcag
cgacagcaacctgcttccaatagtacaagatctgtttggaataataatgacgttgccttg
aatagaacttccgatacgtctggaagaagcacacaaaatcataattctcaaccaaataga
tcaaatactgtcaatagaaatacaacaatgtcgaataacactaatggtgcaagatctgtt
cggaataataacgatgttggcttgatcagaacctccggcacatccggaagaagcgcacaa
aatcataattctaacgtttctcagccaaataggcctgttaacaggactgttaacagaaat
acgaataacagaggcaactttgattcttgggataactcctgggacaattttaatacggat
gactttaacagttcatgggacggatcaaatcagtctgcgtctagcaattctcataacgca
actaacagaagtagcacctggggtaatatcgacaatgatgctgagatcatgtgtaattgt
catcagaacgcaattcagttaacagtgagaaaagaaggaccgaataaaggacgtctgttt
tacaaatgcgctaaaccgcaaggtagtggttgtgatttttttctatgggcatctgatgga
gctgaacctcaaagtagcgcagcgacttcaagccgtgtacctgcgttaaatagggacgat
ggaagtgctgatcacttttctcgcgttggtacttctaataatgattggggagactcgtca
acgaatgatgttatgtgccaatgtaatcaacctgcgcgaaagctgacagttcacaaagaa
ggacccaataaaggccgacaattttatgggtgtccaaaaggtatgaactccacttgtaac
ttttttcaatgggcagatgagaatgataatcaaaatacggattggagcaattcagttgta
aatagaggaaaaaataaaacgcatagtagaggcggtagtgtttccaaaaggccaagactt
accggcagcaagagaaaatgtggaaattgcggaatggaaggtcacacgagaaacagatgt
ccagataatgcgatggactga
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integrated database retrieval system
