Linepithema humile (Argentine ant): 105674762
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Entry
105674762 CDS
T04898
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03440
Homologous recombination
lhu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105674762 (Top3alpha)
03460 Fanconi anemia pathway
105674762 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhu03032
]
105674762 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105674762 (Top3alpha)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105674762 (Top3alpha)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Topoisomerases
105674762 (Top3alpha)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105674762 (Top3alpha)
FA (Fanconi anemia) pathway
105674762 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Lar_restr_allev
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
105674762
NCBI-ProteinID:
XP_012226745
LinkDB
All DBs
Position
6:17696011..17700931
Genome browser
AA seq
1146 aa
AA seq
DB search
MAFLKLYNIASNYAIFCGHLNWTLKSIGSKLSKFTNASYGVKQYCSEYNMKVLNVAEKHD
AAKNIAGYLSRGTSRKREGLSVYNKIFEFNTQLWGQNCQMVMTSVSGHLLTYEFIGAYRK
WQGCHPLTLFDAPLSKLCSDESYIKIKKTLEREVKFCNALIIWTDCDREGENIGFEIIQV
CQAVKPNIRVYRAKFSEITKPSVERALQTLGEPDKAISDAVDVRSELDLRIGAAFTRFQT
LRLQKVFPDTLRDMLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKIKVTDDRDDTFVEF
RWARVRLFEKLPCQIFLDMCLERPEATVEKVACKPKSKWRPLPLDTIELEKQGSRKLRLN
AKETMKIAERLYTQGLISYPRTETNIFPKELNLRSLVEQQVGNQAWGNFAQGLLESGINP
RQGKKSDQAHPPIHPTKYSNSLQGNEAKVYEFVVRHFLACLSKNAEGLETTVEIDIAKEK
FVANGLKIIAKNYLEVYIYDKWNNKQIHSYEQGQVFRPTSIDMVEEKTSPPSLLTEAELI
ALMDKHGIGTDATHADHIDTIKSRQYVGLTDNQYFMPGKLGIGLVKGYDDMGFEMSKPHL
RADLEKDLQLICQRQKEPNEVLQNQINKYREVFKVAMERANLIDAALAHYLEERPTQAEQ
VQFAPVEEEIAILKCPKCGSNMILKERRQGRGKYISCMGYPTCTNVIWFPEAVEDVEILN
ETCNQCTENMRKLKFKLVRNVIPLYGTSYTTCIGCDTTFNEMLNIKEDCIRQNRRANYIQ
NNTRDTSSSTSSTSQLQVTQRQQPASNSTRSVWNNNDVALNRTSDTSGRSTQNHNSQPNR
SNTVNRNTTMSNNTNGARSVRNNNDVGLIRTSGTSGRSAQNHNSNVSQPNRPVNRTVNRN
TNNRGNFDSWDNSWDNFNTDDFNSSWDGSNQSASSNSHNATNRSSTWGNIDNDAEIMCNC
HQNAIQLTVRKEGPNKGRLFYKCAKPQGSGCDFFLWASDGAEPQSSAATSSRVPALNRDD
GSADHFSRVGTSNNDWGDSSTNDVMCQCNQPARKLTVHKEGPNKGRQFYGCPKGMNSTCN
FFQWADENDNQNTDWSNSVVNRGKNKTHSRGGSVSKRPRLTGSKRKCGNCGMEGHTRNRC
PDNAMD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcttttttaaaattgtataatatcgcatctaattatgcaatattttgtggacactta
aactggacacttaaaagcataggcagcaagttgtccaagtttacaaatgcttcttacggg
gtaaagcagtattgttcagaatacaatatgaaagttcttaatgttgctgagaaacatgat
gctgccaaaaatatcgctggttatttgtcacgtggtaccagcagaaagagagaaggctta
tctgtctacaacaaaatttttgaatttaatacacaattgtggggccaaaactgccaaatg
gtgatgacatcggtatcaggccatttattaacttatgaatttataggagcatatcgtaaa
tggcaaggctgtcatccattgactttatttgatgctccattgtcaaaattatgttcagat
gaaagttatataaaaattaaaaagacgttagagcgagaagtaaaattttgcaatgcatta
attatttggacagattgtgatagagaaggggagaacataggttttgaaattatacaggtc
tgtcaagcagtgaagccaaatattcgtgtatacagggcaaaattctcagaaattacaaaa
ccatctgttgaaagagctttacaaactttgggagagccagataaggcaataagtgatgct
gtagatgtaagaagcgaattagatttaagaattggtgctgcattcacaaggtttcaaacc
ttaaggttgcaaaaagtgttccctgatactcttagagatatgctcatcagctatggaagc
tgtcagtttccaacacttggatttgtagttgaaagatttctggcgattgatcggtttaag
tctgagccatactggaagataaaagtgaccgatgatcgcgatgatacatttgtagaattc
agatgggccagagtaagattgtttgagaaattgccttgccagattttcctggacatgtgt
ttggaacgcccagaagcaacagtagagaaagtagcatgtaagccgaaaagcaaatggaga
cctttacccctggataccattgaactggagaagcaaggctctcgtaagttacgtctaaac
gcaaaggagactatgaagatagcagagagattgtacactcaaggtctcattagttatcca
cgcacggaaactaatatatttccgaaggaattgaatctgagatctttggtagaacaacaa
gtcggcaatcaggcgtggggtaattttgcgcaaggtttattggaatctggaataaatccc
agacaagggaagaagagtgatcaagcgcatccgcctattcatcccacaaagtactctaac
agtttgcaaggaaacgaagcaaaagtctacgaatttgtggttcgacattttttggcttgt
ctatcgaagaacgcagaaggtctcgaaacaacggtggagatcgatatcgcgaaagaaaaa
ttcgtggctaacggtctcaaaataatagcaaagaactatctcgaagtttatatatacgat
aagtggaacaacaaacagatacactcttacgagcagggacaagtttttcggccgaccagc
atagatatggtagaagagaagacttcaccacctagcttgttaactgaagccgaattgatt
gcgttgatggacaaacatggcattggtacggacgccactcacgctgatcacatcgacacc
atcaaatccagacaatatgtaggtttaacagacaatcaatatttcatgccgggcaaattg
ggaatcggactggtcaagggttacgacgatatgggattcgaaatgtctaagccgcatttg
cgcgccgatctagaaaaggatttacaattaatatgccaacgtcagaaagagccgaatgag
gtgttgcaaaatcaaattaacaaatatcgcgaggtgttcaaagtggcgatggaacgtgct
aatctgatagacgctgctttagcacattatcttgaagagagacctacccaagctgaacaa
gtacagtttgctcctgtggaagaagagattgctatcttaaaatgtccgaaatgtggctcc
aacatgattttgaaggaaaggaggcaaggcagaggaaaatatattagctgtatgggttat
ccaacgtgtactaatgtaatctggttcccagaagctgtagaagatgtagaaattttgaat
gaaacatgcaatcagtgtacagaaaatatgcgcaaattgaaattcaaattagtgagaaat
gttatacctttgtacggtacttcttacactacttgtataggatgtgatactacattcaac
gaaatgttaaatattaaagaggattgtatcagacaaaacaggagagcaaattacattcaa
aataatacaagggatacatcaagctccacctcaagtacgtctcagttgcaagtcactcag
cgacagcaacctgcttccaatagtacaagatctgtttggaataataatgacgttgccttg
aatagaacttccgatacgtctggaagaagcacacaaaatcataattctcaaccaaataga
tcaaatactgtcaatagaaatacaacaatgtcgaataacactaatggtgcaagatctgtt
cggaataataacgatgttggcttgatcagaacctccggcacatccggaagaagcgcacaa
aatcataattctaacgtttctcagccaaataggcctgttaacaggactgttaacagaaat
acgaataacagaggcaactttgattcttgggataactcctgggacaattttaatacggat
gactttaacagttcatgggacggatcaaatcagtctgcgtctagcaattctcataacgca
actaacagaagtagcacctggggtaatatcgacaatgatgctgagatcatgtgtaattgt
catcagaacgcaattcagttaacagtgagaaaagaaggaccgaataaaggacgtctgttt
tacaaatgcgctaaaccgcaaggtagtggttgtgatttttttctatgggcatctgatgga
gctgaacctcaaagtagcgcagcgacttcaagccgtgtacctgcgttaaatagggacgat
ggaagtgctgatcacttttctcgcgttggtacttctaataatgattggggagactcgtca
acgaatgatgttatgtgccaatgtaatcaacctgcgcgaaagctgacagttcacaaagaa
ggacccaataaaggccgacaattttatgggtgtccaaaaggtatgaactccacttgtaac
ttttttcaatgggcagatgagaatgataatcaaaatacggattggagcaattcagttgta
aatagaggaaaaaataaaacgcatagtagaggcggtagtgtttccaaaaggccaagactt
accggcagcaagagaaaatgtggaaattgcggaatggaaggtcacacgagaaacagatgt
ccagataatgcgatggactga
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integrated database retrieval system
